BGIOSGA035845
| Gene Name |
BGIOSGA035845 |
|---|---|
| Description |
SKIP interacting protein 22 |
| Definition |
Oryza sativa Indica Group BGIOSGA035845, complete gene. |
| LocusTag |
SIP22 |
| Ensembl Transcript ID |
BGIOSGA035845-TA |
| Ensembl Protein ID |
BGIOSGA035845-PA |
| Length |
5664 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:21551315..21556978 |
| Sequence Coding Region |
21556734..21556978,21555740..21555899,21555527..21555642,21555349..21555439,21555151..21555246 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome12:21551315..21556978 source=RiceIndica12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome12:21551315..21556978 source=RiceIndica12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCAGCGGCGGCGGTGGGGGGAAGGGGGGAGAGGCTGTCGTCCTCCTCCCCGACGGCGGCGGCGCCGCAGGTGGACGCCGGGAAGTACGTCCGGTACACGCCCGAGCAGGTGGAGGCGCTGGAGCGGGTGTACACCGAGTGCCCCAAGCCCAGCTCGCTCCGCCGCCAGCAGCTCATCCGGGAGTGCCCCATCCTCAGCAACATCGAGCCCAAGCAGATCAAGGTCTGGTTCCAGAATCGCAGATGCCGGGAGAAGCAGCGCAAGGAGGCCTCCCGGCTGCAAACTGTGAACCGGAAGCTGAATGCGATGAACAAGCTGTTGATGGAGGAAAATGACCGGCTGCAGAAGCAGGTGTCCCGTCTCGTCTACGAGAACGGCTACATGCGGACTCAACTGCACAATCCTTCTGCAGCCACCACAGATACAAGCTGTGAGTCTGTGGTGACAAGTGGTCAGCACCATCAACAGCAAAACCCAGCAGTTCTGCATCCGCAAAGGGATGCGAACAACCCAGCAGGTCTTCTCGCTATTGCTGAGGAGACCTTGGCAGAGTTCATGTCGAAGGCGACAGGAACTGCTGTCGAATGGGTGCAAATGGTTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCATCGCTGTTTCGCACAATTGCAGTGGCGTAGCAGCACGAGCTTGCGGCCTTGTGAGCCTTGAGCCCACAAAGGTTGCGGAGATCCTCAAGGATCGCCCCTCTTGGTACCGTGATTGCCGATGCGTCGATATCATCCATGTTATCCCTACGGGTAACGGCGGAACCATTGAGCTAATCTACATGCAGACATATGCACCGACAACTTTGGCGGCACCACGCGACTTTTGGACTCTCCGCTACACAAGTGGACTTGAAGATGGGAGTCTTGTGATCTGTGAAAGGTCATTGACTCAGTCCACTGGTGGCCCATCTGGGCCTAACACTCCGAATTTTATCAGAGCCGAGGTACTTCCCAGTGGTTATCTGATTCGACCATGTGAGGGAGGTGGCTCCATGATTTACATTGTTGATCATGTTGATTTGGATGCTTGGAGTGTGCCTGAGGTTCTTCGACCGCTCTATGAATCTCCAAAGATCCTTGCACAGAAGATGACCATTGCAGCATTGCGACACATTAGGCAAATTGCGCATGAGTCAAGCGGTGAAATCCCCTACGGTGCTGGTCGCCAGCCTGCTGTTTTCAGGACCTTCAGTCAAAGGCTCAGCAGAGGTTTCAATGATGCTGTTAGTGGATTTCCAGATGATGGGTGGTCTTTGTTGAGCAGTGATGGTAGTGAGGACATTACAATTTCAGTAAACTCGTCTCCAAACAAGCTTGTTGGATCCCATGTCAGCCCGAACCCTCTGTTTTCTACTGTTGGAGGTGGCATCTTGTGCGCAAAGGCATCAATGCTACTTCAGAATGTACCTCCTGCTCTACTTGTGCGATTTCTGAGGGAGCATCGTTCTGAATGGGCTGATCCTGGTGTTGATGCTTATTCTGCTGCTTCTTTGCGAGCCAGCCCATATGCAGTTCCAGGCTTAAGGACCAGCGGGTTTATGGGCAGTCAGGTTATACTACCCCTCGCTCATACCTTAGAGCATGAAGAGTTCTTGGAGGTTATTAGGCTCGAAGGACATGGTTTCAGCCATGATGAGGTGCTTCTATCACGGGATATGTACCTTCTACAGCTTTGCAGCGGGGTTGATGAGAATGCTACTAGTGCATCTGCACAGCTTGTCTTTGCTCCTATTGACGAATCTTTTGCTGATGATGCACCACTTTTACCCTCAGGATTCCGTGTGATACCACTAGATACAAAAATGGATGGGCCATCTGCAACACGCACGCTCGACCTTGCATCCGCCCTTGAGGTTGGACCAGGTGGAGCTTCGCGTGCTTCAGTTGAAGCATCTGGCACATGCAACAGATCAGTCCTGACCATTGCTTTCCAATTCTCATACGAGAACCACCTTCGTGAGAGCGTGGCGGCAATGGCTAGGAGTTATGTCAGAGCTGTGATGGCATCCGTGCAGAGGGTGGCTGTGGCAATAGCTCCTTCTCGACTTGGACCCCAGATCGGAATGAAGCACCCTCCAGCCTCTCCTGAGGCGCTTACACTTGCTAGCTGGATTGGTAGGAGCTATAGGGCTCACACCGGAGCAGATATCCGTTGGTCTGATACCGAAGATGCCGATTCTCCCCTGGCGCTCCTGTGGAAGCACAGCGACGCAATACTGTGCTGTTCTCTGAAGCCTGCTCCTATGTTCACCTTCGCCAACAATGCCGGCCTCGACATCCTCGAGACGACGCTGGTCAACCTCCAGGACATCTCGCTCGAGATGATCCTGGATGACGAGGGCCGGAAGGCGCTGTGCTCGGAGTTCCCCAAGATCATGCAGCAGGGTTTCACCTATCTCCCTGGAGGCGTCTGCAAGTCGAGCATGGGGCGGCAGGCATCGTATGAGCAGGCGGTGGCGTGGAAGGTTCTTAGCGACGACGACGCGCCGCACTGCCTCGCCTTCATGCTCGTCAACTGGACCTTCATGTGA</cdnaseq> |
| Protein Sequence |
<aaseq>MAAAAVGGRGERLSSSSPTAAAPQVDAGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVSRLVYENGYMRTQLHNPSAATTDTSCESVVTSGQHHQQQNPAVLHPQRDANNPAGLLAIAEETLAEFMSKATGTAVEWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDIIHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWTLRYTSGLEDGSLVICERSLTQSTGGPSGPNTPNFIRAEVLPSGYLIRPCEGGGSMIYIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAALRHIRQIAHESSGEIPYGAGRQPAVFRTFSQRLSRGFNDAVSGFPDDGWSLLSSDGSEDITISVNSSPNKLVGSHVSPNPLFSTVGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDAYSAASLRASPYAVPGLRTSGFMGSQVILPLAHTLEHEEFLEVIRLEGHGFSHDEVLLSRDMYLLQLCSGVDENATSASAQLVFAPIDESFADDAPLLPSGFRVIPLDTKMDGPSATRTLDLASALEVGPGGASRASVEASGTCNRSVLTIAFQFSYENHLRESVAAMARSYVRAVMASVQRVAVAIAPSRLGPQIGMKHPPASPEALTLASWIGRSYRAHTGADIRWSDTEDADSPLALLWKHSDAILCCSLKPAPMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM</aaseq> |
| Gene Sequence |
<dnaseqindica>1..245#1080..1239#1337..1452#1540..1630#1733..1828#1908..2021#2122..2205#2399..2554#2642..2716#2823..2929#3046..3238#3366..3554#3648..3728#4380..4514#4601..4923#5054..5159#5252..5401#5518..5664#ATGGCAGCGGCGGCGGTGGGGGGAAGGGGGGAGAGGCTGTCGTCCTCCTCCCCGACGGCGGCGGCGCCGCAGGTGGACGCCGGGAAGTACGTCCGGTACACGCCCGAGCAGGTGGAGGCGCTGGAGCGGGTGTACACCGAGTGCCCCAAGCCCAGCTCGCTCCGCCGCCAGCAGCTCATCCGGGAGTGCCCCATCCTCAGCAACATCGAGCCCAAGCAGATCAAGGTCTGGTTCCAGAATCGCAGGTCAGTCTCATCTCCTTCTCTCTCTTCGATCTGTTTCTGCTCGGGTTTGTTCAGCAGCCATGGCGTGTGTTCTTCGGTTTCTTTTCTTGCTCTTGTGTAATGTGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCTTGTTTCCTGTGCTTGCCATTTTAAGGGCAATCTTTTGAACCCTGTGTTGTGGCCTGTGTTAGTGTTCATGTTTTCTTGCTATAGGCCTCCATAAGCATCACCTCCTGGTTATCATCTCGCTTTCTTTTTTCAGTGGATCACAAGTAGGGCAATAGTTTTGTCACTAGTGGTGTCACTGTGGAAGAATGTGAAGGGCAACATTTTGAGCAAGTTTGGTATATACTATTACTGTACTCATGAAGGCCAAATATAAATCAAGAATCCTTTTTAGGTAGAGGATGCTCTTGTTTAGAGTTGAGTTCACAGATGCAGACAGAAACATCACTGTCAATTAGGCAATGATTTTCACATATGGAATACTAACTGTTATTGCATAGTATATAGTCATTTGTCTCTTTTGCAAATGACCTTTTGCTTGTTCCTGTTCAATGATCCCCCTTTTAACCTTGGGGAATATTTGCTAAAATGCCTTTGCCTAACTTCCTTTGTGCTCATTTGGGCTGTGCCAATCAGTATCCATTAACAAGTATTGGAATCTTGTGTATTAGAAGACACCATCCTTTAGATAGTTTATTCATGTACTTTTGCCACTGAAATTGTGCCTTCCTTGTAATTGGCAGATGCCGGGAGAAGCAGCGCAAGGAGGCCTCCCGGCTGCAAACTGTGAACCGGAAGCTGAATGCGATGAACAAGCTGTTGATGGAGGAAAATGACCGGCTGCAGAAGCAGGTGTCCCGTCTCGTCTACGAGAACGGCTACATGCGGACTCAACTGCACAATGTGAGCTCCCTGTGCTTACAGGCTTTTGTTCTTACAATTGCTTCATATTTTGATCATCCTGTTTTCTTAATCAGTAATGTTTGTATGTACTTTGTAGCCTTCTGCAGCCACCACAGATACAAGCTGTGAGTCTGTGGTGACAAGTGGTCAGCACCATCAACAGCAAAACCCAGCAGTTCTGCATCCGCAAAGGGATGCGAACAACCCAGCAGGGTATCCACAAAACCTGGTCTATTTTCTTCTTTTGTTAGGCCGTGCTTTTTTGTATGAAAGATTGCTGAGATGATTTTATTTGCGCAGTCTTCTCGCTATTGCTGAGGAGACCTTGGCAGAGTTCATGTCGAAGGCGACAGGAACTGCTGTCGAATGGGTGCAAATGGTTGGGATGAAGGTAATGTATTCGTTGTACAAGAAAACTGTGCAGTATGTTGATTTTCTCTTTCCATTCATGTTTTTTTTGTTCAAATCAACTGAAATGAAAATTTGATTACAGCCTGGTCCGGATTCCATTGGAATCATCGCTGTTTCGCACAATTGCAGTGGCGTAGCAGCACGAGCTTGCGGCCTTGTGAGCCTTGAGCCCACAAAGGTATGATTTGTTTTCCTTGATATTGTGTTACATTTCCCATTAACTGGCATGCTACAGACCCTGATAAGCTTCATTTTAGGTTGCGGAGATCCTCAAGGATCGCCCCTCTTGGTACCGTGATTGCCGATGCGTCGATATCATCCATGTTATCCCTACGGGTAACGGCGGAACCATTGAGCTAATCTACATGCAGGTAAATATACCCAATCGTGACTCATGTGTTGCATTTTTCTCAAGCATCACTAGCTACTCTTTGCTTTTGGTAATAACCATTGCCCTTTTCAATTCCTTAGACATATGCACCGACAACTTTGGCGGCACCACGCGACTTTTGGACTCTCCGCTACACAAGTGGACTTGAAGATGGGAGTCTTGTGGTATTACTTTGATCTTTAATTGCATGCTGTCAGCTCATTAAACAAAATGCTTCCTTTCATTTTCTTGTATGGTCTATTCGTCATGTTATGATCGGACTTGTTCTGTTTGGATCATACCACATCATCATGGTTTTCAACTGAAGTGTAGTTTCTGTTGTATTAAATATTGTTTGACACCATTCCTGTTCTGTAGATCTGTGAAAGGTCATTGACTCAGTCCACTGGTGGCCCATCTGGGCCTAACACTCCGAATTTTATCAGAGCCGAGGTACTTCCCAGTGGTTATCTGATTCGACCATGTGAGGGAGGTGGCTCCATGATTTACATTGTTGATCATGTTGATTTGGATGTAAGTAACAATAGTGTTTTCACATTAACTAGTGTAATATTGAATAGTTTTGAGATACATATCTTATTAATCCTGTGTATTTTACAGGCTTGGAGTGTGCCTGAGGTTCTTCGACCGCTCTATGAATCTCCAAAGATCCTTGCACAGAAGATGACCATTGCAGTATGTGCACTGTTTTATTCTGTTGTTGAAGAGCACTTGGTCACCTCATGGTGATTGTGAGTGCATAACTTTTCTGATCACCAATGACATGGTTCATTCTGTTCAGGCATTGCGACACATTAGGCAAATTGCGCATGAGTCAAGCGGTGAAATCCCCTACGGTGCTGGTCGCCAGCCTGCTGTTTTCAGGACCTTCAGTCAAAGGCTCAGCAGGTCTGTAGCTATTTGAGGGTTCCCATGTATTAGAACCAATTGGCATACTGTCATATGACACAGTTCCATGCATGTCTCATTGCTCACGCATCTGAACTCCATACTCTAATTTGCAGAGGTTTCAATGATGCTGTTAGTGGATTTCCAGATGATGGGTGGTCTTTGTTGAGCAGTGATGGTAGTGAGGACATTACAATTTCAGTAAACTCGTCTCCAAACAAGCTTGTTGGATCCCATGTCAGCCCGAACCCTCTGTTTTCTACTGTTGGAGGTGGCATCTTGTGCGCAAAGGCATCAATGCTACTTCAGGTTGACATAGGCTCTATTTAGTTGCTCAGCTAATTATAGATTGTCTCTATCTTTGTTTCACTTTGACCAAAATTGTTCCAAATCAAAGAATTAAGCTTTACAAAATGTCATTTTTTTTATAATGTAGAATGTACCTCCTGCTCTACTTGTGCGATTTCTGAGGGAGCATCGTTCTGAATGGGCTGATCCTGGTGTTGATGCTTATTCTGCTGCTTCTTTGCGAGCCAGCCCATATGCAGTTCCAGGCTTAAGGACCAGCGGGTTTATGGGCAGTCAGGTTATACTACCCCTCGCTCATACCTTAGAGCATGAAGAGGTAATGTTGTAATTGAGTCCTTGTAGGCTTGTAGCTCCTTTTCCACGATGAATGGCAAATATTAATGCATCAACCTGGCATTCTGAATTGCAGTTCTTGGAGGTTATTAGGCTCGAAGGACATGGTTTCAGCCATGATGAGGTGCTTCTATCACGGGATATGTACCTTCTACAGGTATTGTGGACCATCCGAGTCAACTATTTATTCCTTTGCTGTTGGGCTGGACAAGTGGGCTTCGGTGGGAGGCATGCTGCTGTTCTTGGCCACCGTATGGGCCTAACCTTCTGCTCAGGGTTTCTGGTGGATCAGGTCCTCCTGCGCATGAATTATTTTTTATTTTTGTTCATAATAAAAGCTGAGATGTAAAAGGTTTAAGAGTCTTAGTTTAGGTTATGGTGCTTCGTTAAGTCTAGCAGGGTGTGCTGCAGCTCGAGGACGAGCTGCTCAAAAAGGGGGGAGTAATGTCATGGGCTTTGGGCTGGGCGTCGTAGGTCCATTGGATAGGATTAGGGTTTGTTAGGATTAGATAAGGTTTGTTAGGATTAGATTAAGGAGTCCTCCATCTATATAAGGAGGGATCCTATCTCAGGTCAATTAGGCATTAGATCAAGATTTATCTTAGTGCCCATCGGCCTGCCTTCTCAGTGCGACGGAGAGCGTCACGCCGTTTAGGTTCAGGACCGTATTCCTTGTTTTTTCATCTACTATAATCCAATCTATCCCCATTCATCCCGATTCTTCACATAATCCTTGCTCATGACAATTGCCTTAAGTTGTACCTGTTTGTTGCATTTTCCTGGTTCTGAGAGATTGCTTTCTATGCAGCTTTGCAGCGGGGTTGATGAGAATGCTACTAGTGCATCTGCACAGCTTGTCTTTGCTCCTATTGACGAATCTTTTGCTGATGATGCACCACTTTTACCCTCAGGATTCCGTGTGATACCACTAGATACAAAAATGGTATGACTGGTCCATAATCTTATTCCAGAGGCCTTGTCTTTCCCATGTTGGCTCACCAATTAACCGTTATGCACTCAAACCTGCAGGATGGGCCATCTGCAACACGCACGCTCGACCTTGCATCCGCCCTTGAGGTTGGACCAGGTGGAGCTTCGCGTGCTTCAGTTGAAGCATCTGGCACATGCAACAGATCAGTCCTGACCATTGCTTTCCAATTCTCATACGAGAACCACCTTCGTGAGAGCGTGGCGGCAATGGCTAGGAGTTATGTCAGAGCTGTGATGGCATCCGTGCAGAGGGTGGCTGTGGCAATAGCTCCTTCTCGACTTGGACCCCAGATCGGAATGAAGCACCCTCCAGCCTCTCCTGAGGCGCTTACACTTGCTAGCTGGATTGGTAGGAGCTATAGGTAAGTAAAATACTTATTTTTAGCAAAAGTCTATCTCAGGTTCTTCATCATCAGAACCACCTACACATTGCCACATCTGAAGTTGTGATCAATGATGTTAATGCACTAGTTATTTCCGTGGATCTTTCAGGGCTCACACCGGAGCAGATATCCGTTGGTCTGATACCGAAGATGCCGATTCTCCCCTGGCGCTCCTGTGGAAGCACAGCGACGCAATACTGTGCTGTTCTCTGAAGGTTAGTAGTGCTGCCCACTAATTTTATGCTCATTTCATCACATGCATGTTCTGGAAACCTTGCTAATGGTCAGTTTGGTTATCTACTGGCAGCCTGCTCCTATGTTCACCTTCGCCAACAATGCCGGCCTCGACATCCTCGAGACGACGCTGGTCAACCTCCAGGACATCTCGCTCGAGATGATCCTGGATGACGAGGGCCGGAAGGCGCTGTGCTCGGAGTTCCCCAAGATCATGCAGCAGGTAAAACCACCATGTCCCTGCCTTGCGACAATCGGTGACGCATCCATCAGAGTACTACCAGACCATGAGCAATGTTCCTGATCAAGCCTGTTTGGGGTCTGTCTATCTTCTTTCAGGGTTTCACCTATCTCCCTGGAGGCGTCTGCAAGTCGAGCATGGGGCGGCAGGCATCGTATGAGCAGGCGGTGGCGTGGAAGGTTCTTAGCGACGACGACGCGCCGCACTGCCTCGCCTTCATGCTCGTCAACTGGACCTTCATGTGA</dnaseqindica> 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| External Link(s) |
