BGIOSGA035852

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Revision as of 08:11, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035852| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035852, complete gene.| tag = OsI_390...")
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Gene Name

BGIOSGA035852

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035852, complete gene.

LocusTag

OsI_39083

Ensembl Transcript ID

BGIOSGA035852-TA

Ensembl Protein ID

BGIOSGA035852-PA

Length

5864

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21458828..21464691

Sequence Coding Region

21464249..21464691,21462589..21462634,21462437..21462526,21461061..21461271,21460707..21460944
,21460461..21460611,21459473..21459949,21459303..21459365,21458828..21459202

Genome Context

<gbrowseImage1> name=IndicaChromosome12:21458828..21464691 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:21458828..21464691 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGCCGCCGACGCCGCAGCCGCCGCCGCCGGTCGACGTCGACCTCGGCAAGCTCAGCTACGAGATATTCTCCCTCCTCGAGAGCAACTTCCTCTTCGGCGCCGGCGGCGGCGGCGGCGGAGGTGTTTGCTCGCTGCCTGGGACGCCCGGGAGGGCGCTTCTTGGAGGGAAGGTGAGGGTGCTCGCGATCGATGGGTGTGGTCCGGGACCAGGTGATGCTCTGCTGGCCGCGGCGGCGCTGGTGAGGCTGGAGACGGCGTTGCGGGAGAAGTCCGGCGATGGCGATGCGAGGGTGGCGGATTTCTTCGACGCGGCGGCGGGGGCCGGGGCGGGGGGTGTGTTGGCGGCGATGCTGTTCTTGAAGGGGGCGGATGGGCGGCCGCGGTACACGGCGGCGGACGCGCTGGCGTTCGTGGCGGCGAGCCTCGGGAAAGGCGGATTACAGGCCTCAAGTCTTTCTGCTGGTGAATTAACTGATCTTCAGGTCTGTTGCAAGAATTTCATTGCTCTTGTCTCTACTGAATATTTCAATTCATCTGGGGAAAGTTTTTCATGGAAACCTTTTTCAGGAAAGGGAAAGCTCAGGAATGGTCAGAAAGTTGCCATCAAGGTGCTCTCCTCCGAGTCAAGGCAAGGAACAAGGGAGTTCTTAAATGAGCTGAGTGTCATATCCAACATAAACCATCACAATCTTGTGAAATTGCATGGCTGCTGCGTCGAGGGAGATCAGAAAATGCTGGTCTACAATTACCTGGAGAACAACAGTCTTGCACAGTCCCTCTTTGGCAATTCCCATAGTAGTATCCAATTAGACTGGAAAACAAGAGTGAAAATATGCATCGGCGTCGCGAGTGGGCTCAAGTATCTTCATGAAGAAGTCCGGCCGGTCATCGTCCACCGTGATATCAAGGCAAGCAACATTCTTCTTGACAAGGATCTGAGCCCCAAGATATCAGATTTTGGGCTGGCAAAGCTTTTCCCGGGCAACATGACGCATATCAGCACCAGGGTTGCAGGAACACTAGGATATCTTGCACCGGAGTATGCGATCCGAGGGCAGCTGACAAAGAAGGCCGACGTCTACAGCTTTGGAGTTCTACTTCTGGAGATTGTCAGTGGAAGATGCCACACTGACCCCAGATTGCCTCTTCAAGATCAGTTCCTACTCGAAAGGAGGTCGTCGCTGCGGCGGGTGTTCGGGGACGCCACGCTGCGCGACACCGTCGCGCCGCTGCTCGTCCCGTGCTACGACCTCGCCACCGCGGCGCCGTTCCTCTTCTCCCGCGCCGACGCCGTCGAGAGCGGCAGCTTCGACTTCCGCCTCCGCGACGTCTGCGCCGCGACGTGCGCCGGCGGGGCCGCTGCCACGGCCGTCCACTCCGTCGACGGCCGCACCGCCATCGCCGCGGCGTCGGGCGGCGTCGCGGCCATGGGCAACCCCACCGCCGCCGCCATCACCCACGTCCTCCACAACAAGCAGGAGTTCCCCCTCGCCGCCGGCGTCGACGACCTCCTCGTCGTCTCCATCGGCTCCGGCTCCTCCTCCGCCGCCACCCCTTCCACCGCCGCCGGGTGGCGAACGCCTCTCCCCTCCCGCTCGCCGTCGCCCGCCGAGATGGTCCGCCTCACCGCCGAGGGCGTCGCCGACATGGTCGACCAAGCGGTGGCCATGGCTTTCGGACACACGTGTGGGCGCAACTACGTCCGCATCCAGGCGGCGTCGCCGGCGTGCAAGACGAAGGCGCTGAGCTCGGTGGACGCGAAGAAGGCGGCGGCGATCGCCGACGGGATGCTGACGCAGCGGAACGTGGAGGCGGAGCTGTTCCGGGGGCGGCGGCTGTCGGAGAAGTCGAACCGGGAGAAGCTGGACGCGTTCGCGGCGGAGCTTGTGAAGGAGCACGAGCGGCGGCGGGCCTCGCCGGGGCTCCCCAACGTGGTCATCAAGCAGGTGGCCGCCGCCGCCGCCGCCGTGACGCCGGCGCGCCTCTCGTCGGCGACCACCACGTCGTCCGCCACCGCCACCACCGCCAGGACCACCGTTTCCAGCATGCCGTCGCCGGCGGCGTCGCTGGACTCCGGCCGCCACTAG</cdnaseq>

Protein Sequence

<aaseq>MASPPTPQPPPPVDVDLGKLSYEIFSLLESNFLFGAGGGGGGGVCSLPGTPGRALLGGKVRVLAIDGCGPGPGDALLAAAALVRLETALREKSGDGDARVADFFDAAAGAGAGGVLAAMLFLKGADGRPRYTAADALAFVAASLGKGGLQASSLSAGELTDLQVCCKNFIALVSTEYFNSSGESFSWKPFSGKGKLRNGQKVAIKVLSSESRQGTREFLNELSVISNINHHNLVKLHGCCVEGDQKMLVYNYLENNSLAQSLFGNSHSSIQLDWKTRVKICIGVASGLKYLHEEVRPVIVHRDIKASNILLDKDLSPKISDFGLAKLFPGNMTHISTRVAGTLGYLAPEYAIRGQLTKKADVYSFGVLLLEIVSGRCHTDPRLPLQDQFLLERRSSLRRVFGDATLRDTVAPLLVPCYDLATAAPFLFSRADAVESGSFDFRLRDVCAATCAGGAAATAVHSVDGRTAIAAASGGVAAMGNPTAAAITHVLHNKQEFPLAAGVDDLLVVSIGSGSSSAATPSTAAGWRTPLPSRSPSPAEMVRLTAEGVADMVDQAVAMAFGHTCGRNYVRIQAASPACKTKALSSVDAKKAAAIADGMLTQRNVEAELFRGRRLSEKSNREKLDAFAAELVKEHERRRASPGLPNVVIKQVAAAAAAVTPARLSSATTTSSATATTARTTVSSMPSPAASLDSGRH</aaseq>

Gene Sequence

<dnaseqindica>1..443#2058..2103#2166..2255#3421..3631#3748..3985#4081..4231#4743..5219#5327..5389#5490..5864#ATGGCGTCGCCGCCGACGCCGCAGCCGCCGCCGCCGGTCGACGTCGACCTCGGCAAGCTCAGCTACGAGATATTCTCCCTCCTCGAGAGCAACTTCCTCTTCGGCGCCGGCGGCGGCGGCGGCGGAGGTGTTTGCTCGCTGCCTGGGACGCCCGGGAGGGCGCTTCTTGGAGGGAAGGTGAGGGTGCTCGCGATCGATGGGTGTGGTCCGGGACCAGGTGATGCTCTGCTGGCCGCGGCGGCGCTGGTGAGGCTGGAGACGGCGTTGCGGGAGAAGTCCGGCGATGGCGATGCGAGGGTGGCGGATTTCTTCGACGCGGCGGCGGGGGCCGGGGCGGGGGGTGTGTTGGCGGCGATGCTGTTCTTGAAGGGGGCGGATGGGCGGCCGCGGTACACGGCGGCGGACGCGCTGGCGTTCGTGGCGGCGAGCCTCGGGAAAGGCGGGTGGCGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTAGTTACAGTTTTCTGAAATTTACTCTTTAAAAAATCCAAACAATAAATTCCTCAGATTCGATAACATACTTGAATAAAAAAAATACGGTGCACTAGAAGTTATACATGTTTAAACATTGGGACAACTGAGAAATTTGGTGCACAAGAAGTTAATGAGAGGAGAGAAGGATGGAAAACTTGATCAATGGGAATATGTGGTCAATGGGTCCTCACTATGAATCTATAATATTTGCAGAACTTAAAATGCTTGAAGATTTCTTAGGTCGTCCTATGAGCTAATGAGCAGCCTTTGAATTTGACTTTGACAGGCAGCAAGCGGCAGGGATTCTCCAGAGCTGAGTCAGCTTAACATTTTGGTTGTGATTTTATAACTAAATTCTTTTCTTCAGCTCAAAAGGTCAAAATTTGGAGTGTATTTGATAACTCATGTAATGAATGGGTCAAGTATATTATTTGCATGAAAATATGTAGGCACAAAGAAGATTGAATTGTTCTGTCACTTTGGATGAGAAAAATTGAAGTCGTATACGAGATCCAACTTTGACAATTAAAGCCATGATCAATTTAATAACTGGATCACATGTACAATGGTCATTGAATTATCTGTTAAAATCTTTTGTCTGTACTAAGTGACAATGACATTTTGCATGCTCACTGTAATGCAGAATACATTGTTCAGAAGTACAACCCAACGCACACCTTTTCAGTTGTATTAAGAGGATCATCTTGTTCACTTATATTAGTCCTAATCATGGAACAGCGGTAGGAAAACTTGCATGTCAAACTGCAGTTAAGGAGTACACCGACATGGTTGTTTCCGTGGAGCCCTTTTGAGTGGATTCCATGAACTATTTAGAAATATTGTTTATGCTTGTAATTTTTTCAGTCTTCAAAATGATTTATATAAACTATACATTTTTCTTGATGAAATGGATATTTCTGTTATACAACTATATTTTAAAACTAAATATTAAATATTTTGGAATTGGAGTATATATATGCCTTTTTGGGAGCAAGTCCTTTTCTATTTACAAATCAATTTCATATGGTCTCTGAAGTCTGAACAGAAATGGCACCTCAAACAGTGTGAACGACTGCTAAGTAACACCTAATCCATCAACCTATATCCATCTATAGTATAATCAACTCAAGATCTTGGGTATTAAGCATTAAGAACTAACTTAAGAAATATGTGAACACAGACACTTCACAACAACTCTAAATCACCTTACATCATTAGAATAACTTAAATCTGATTCTTCCGAGAATAAGAAATGTACAAAATATTAATTTGTTTATCTTTGTTTATGCTTGTCGTTTCCTTGTGTGAGGTCAGCACTATGTCTTTTCCATGCTACTTCCCAGAGTTGCAACCAGCTAAAGTCAATCCCAGTGGGACATCTGCTGGTGGACTCCCATATATTCAGGGATTCAGGGCAGAGAGCAGTATGCTTTTGCTTCTAAAATTGCAGATTCATACTCTCTCCTCTTCTTTCTCCTCTTCTCCAAGAGTTCTTTGCTGGGTGCTGGCTGTTCTTGGATATTCATACAGATTACAGGCCTCAAGTCTTTCTGCTGGTGAATTAACTGATCTTCAGGTGAGTTTTGCTTATTGGATTCTTTTTTCTTCATTGCTGAATCTACTAAATTCTGTGTCTAGGTCTGTTGCAAGAATTTCATTGCTCTTGTCTCTACTGAATATTTCAATTCATCTGGGGAAAGTTTTTCATGGAAACCTTTTTCAGGAAAGGTATTAGTTCAGTTTTCTTTGGATTAGACTGTATTTAATGGGCTCTTCCTTTCGGTTCTTGTGCTTATCATCAGTTCATCTATTTCTGTTTGTAACCGTCAGTTCATCTTCTGAAGATCAACGGTCACACCGCAAACTTGGTTACTCTACAATTCAATGTGAATACAAGTGTTTTTTCTCATGGATTTTGTTGGACAACATACAATTCTTAACTCTGACTGGGACGAGTGTTTCTCTGTCAGATTTGCATACTTCATGTCTTTATTTCTTTGTTACAATTTTTCTGAGTTTTCTAGAGATTTTGTTCTTCGTTTCTGCTCTCTGGGCTCACAGCAAGGAGAAACACAAGAAAAGAGACGGTGTGTCTTTTCTTCCTTGAGGGCATGAGTTTTGCCCTTTTTTCTTGAAATTACTCTAGAAAGAGAAAAGTAGGTTCATTGTGTAGAATTTTTCAACAAAGTACTACATTATCTCAATCTCTTTTTATCGATCGATTATTTTCTCTCAGGTTTATACTTTTATACCAAGAGTACTTTTACGGTGATCTCTACATGATATTCTGAAGACACAGCTGAAGAGTCCTAGAAGAAAAACCCTGAATTGACAGTAATGACTTGCTTTCCTGCGTTCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGAAACATCCAGATGCCTTCTTCTGATTGATCTTGTTCTTTCCCAGATACACCGATCATCAGAAATGTGAAGATCTACTCCTCCAAGGAGCTCAGAAAAGCCACAAAAAATTTCTGCTCAGGACACAAACTAGGACAGGGTTCTTTTGGCTGCGTCTACCTGGTAGCTTGCTAGTCATTTCAAGCATTGACATTTCAAAGTCCAAAGCTCAAAGCCCTGTGTGCCATAACCCAATTAGTTCCTCCAAATGCCTGAATTATCATAAACTGATGAATATATACATATACTCTTCATGCAGTTTCTATCACTGAATTAGTGAACAGTGGTAGAAGCAATATTGCCATTCTCTTCATGCTTAGAAGTTTCTATGGCTGTACCATTTGGACCAGTCATTAACATGATTTCGCATTTCCTCACATGAATTGTTCAGGGAAAGCTCAGGAATGGTCAGAAAGTTGCCATCAAGGTGCTCTCCTCCGAGTCAAGGCAAGGAACAAGGGAGTTCTTAAATGAGCTGAGTGTCATATCCAACATAAACCATCACAATCTTGTGAAATTGCATGGCTGCTGCGTCGAGGGAGATCAGAAAATGCTGGTCTACAATTACCTGGAGAACAACAGTCTTGCACAGTCCCTCTTTGGTAAAGAACAAAAAAAAAAAATCAGTTTCCACTAGATTCTCAAATCATGGTGAATTTGTGATACGTTTTGTTCTCAGAACTCTGAATCTCTGAAGCATCATGATCATGTCCTTCAGGCAATTCCCATAGTAGTATCCAATTAGACTGGAAAACAAGAGTGAAAATATGCATCGGCGTCGCGAGTGGGCTCAAGTATCTTCATGAAGAAGTCCGGCCGGTCATCGTCCACCGTGATATCAAGGCAAGCAACATTCTTCTTGACAAGGATCTGAGCCCCAAGATATCAGATTTTGGGCTGGCAAAGCTTTTCCCGGGCAACATGACGCATATCAGCACCAGGGTTGCAGGAACACTGTAAGCAGAGGCATTTTCTTGTTGCTCTTCAGCTTTGATCTTTCATGCATATTGTTGTGTATGAATAATTTGGCATTTCATTCTTCTCCTTCTAGAGGATATCTTGCACCGGAGTATGCGATCCGAGGGCAGCTGACAAAGAAGGCCGACGTCTACAGCTTTGGAGTTCTACTTCTGGAGATTGTCAGTGGAAGATGCCACACTGACCCCAGATTGCCTCTTCAAGATCAGTTCCTACTCGAAAGGGTAAAGAACAATGCCGACAATAGCATATAACTTTTCTAAATCTGCATTATTATTATTGCATATGACTTCTCCCAGACTACTGTCTGATTCTTTAGCTATTTCAGACAACAAATTGGAGCAAGAACCATTCTTTTATGTATAAGTCCAGTAAACACCTATGATAGATTCCGTATGTTCCCTGTATGACAAACCACTAGGCACATACCTGTTCTGGTCACAATGACTGGTCAATTCAGATAATATGGTTGATATGCTTGTGAGACTGGGAGCTTTGCAATGATATGCACAAGGAAGTTTCCTCTCTTATTAAAGTAAACAATTCATAGAACTGAATCAGCTCCCTTTGACGGGTCTTCGTGTTCTTGTATGGGCCACCGCTCTGAATTATGTCAGAAATGGTCTTCAATACCACATGCATTTGCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGCGGCGCTGTTCCGGCGCGGGTCGTCGGCGGAGAGGTCGTCGCTGCGGCGGGTGTTCGGGGACGCCACGCTGCGCGACACCGTCGCGCCGCTGCTCGTCCCGTGCTACGACCTCGCCACCGCGGCGCCGTTCCTCTTCTCCCGCGCCGACGCCGTCGAGAGCGGCAGCTTCGACTTCCGCCTCCGCGACGTCTGCGCCGCGACGTGCGCCGGCGGGGCCGCTGCCACGGCCGTCCACTCCGTCGACGGCCGCACCGCCATCGCCGCGGCGTCGGGCGGCGTCGCGGCCATGGGCAACCCCACCGCCGCCGCCATCACCCACGTCCTCCACAACAAGCAGGAGTTCCCCCTCGCCGCCGGCGTCGACGACCTCCTCGTCGTCTCCATCGGCTCCGGCTCCTCCTCCGCCGCCACCCCTTCCACCGCCGCCGGGTGGCGAACGCCTCTCCCCTCCCGCTCGCCGTCGCCCGCCGAGATGGTCCGCCTCACCGCCGAGGGCGTCGCCGACATGGTAAAAAAACACACACCCACACCCAATCCCAACCCTCCATCTCGAATCCGACGGCTCCCATCGAACCACGTCACTAACTCACCATGGGTAAAACCGTAAATTCCCAGGTCGACCAAGCGGTGGCCATGGCTTTCGGACACACGTGTGGGCGCAACTACGTCCGCATCCAGGTCAGACCCGAAAAATCTAATTACCGAATTACCCCTCCATTTTTACCATTTTACCCCTCATTTTTACTGACCTCGTCGGCGATGTGTGTTCACTGACCAGGCGGCGTCGCCGGCGTGCAAGACGAAGGCGCTGAGCTCGGTGGACGCGAAGAAGGCGGCGGCGATCGCCGACGGGATGCTGACGCAGCGGAACGTGGAGGCGGAGCTGTTCCGGGGGCGGCGGCTGTCGGAGAAGTCGAACCGGGAGAAGCTGGACGCGTTCGCGGCGGAGCTTGTGAAGGAGCACGAGCGGCGGCGGGCCTCGCCGGGGCTCCCCAACGTGGTCATCAAGCAGGTGGCCGCCGCCGCCGCCGCCGTGACGCCGGCGCGCCTCTCGTCGGCGACCACCACGTCGTCCGCCACCGCCACCACCGCCAGGACCACCGTTTCCAGCATGCCGTCGCCGGCGGCGTCGCTGGACTCCGGCCGCCACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035852