BGIOSGA035864

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Revision as of 08:11, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035864| Description = BGIOSGA035864| Definition = Oryza sativa Indica Group BGIOSGA035864, complete gene.| tag = | tid = BGIOSGA035864-TA|...")
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Gene Name

BGIOSGA035864

Description

BGIOSGA035864

Definition

Oryza sativa Indica Group BGIOSGA035864, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA035864-TA

Ensembl Protein ID

BGIOSGA035864-PA

Length

3327

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21318876..21322202

Sequence Coding Region

21321800..21322202,21318876..21320530

Genome Context

<gbrowseImage1> name=IndicaChromosome12:21318876..21322202 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:21318876..21322202 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGAAACATCTACCGAAGGATGCAAGATTCTTCCGCGGCAAACCCATCGAAGATGAGCTGGAGCTAGAGGCCGCCGGGCCCCGGCGATTCCACTACGGCGAGCTCGCCGCGGCCACGGCGAACTTCTCCGACGACAGGAGGCTGGGGAGCGGCGGCTTCGGGTCGGTGTACCGCGGGATCTTGAGCGACGGCGGCGTGAGCCGCGATGTCGCCGTGAAGAGGGTGGCCGAGACATCTCGTCAGGGATGGAAGGAGTTCGTCGCCGAGGTGAGGATCATCAGCCGGCTCCGCCACCGCAACCTCGTGCCGCTCGTCGGCTGGTGCCACGACGGCGGCGACGAGCTGCTCCTCGTCTACGAGCTCATGCCCAATGGCAGCCTCGACGCCCACATCCACAGAACTAGTGGCGTCGCTGGCTGGCCAGTGGCCTCGGACCTTGTCATCTTCCTCCTCTTCCTCTCCGTCGTCGTCGGCTCGCTATGCGAGACGGCAATCGGTCATCACAACCTGAACCTCCCGTATCAGCCGTCGTGCTCGACCACCGGCAACTACACCGGCGACAGCCAGTACAAGAAGAACCTCGACCAGCTGTTCACCAGCCTCTCCGGCGGCGCCATCGCCGGGGACTGGTTCAACACCAGCTCGGTCGGGACGGGCGCCGACCAGGTGTTCGGCCTCATCATGTGCTACGCCGACAGCAACGCGACGGAGTGCCAGAAATGCCTCGCCATGGCGCCCGCTGTGGTCCAGCATCCGTGCCGCGGAAGCCGGTCGGTGAACGCCAACTACGACGCCTGCCTCCTCCGCTACTCCGACGAGCCCTTCTTCTCCGAGCTCACCACCTATGGCGGCAACACCAACGTTTCCTTGGACGTCGACGACACGAACCTCTACGTCGAGAATATGACCGCCATGAACGACACGCGGTGGCAGCTGATGAGCCAGCTCGCCGAGAGGGCCGGCGACACCAAGCTCAGGCTGGACAACGGCAGCTTGCCGTACGTCGACTCGAAGCTCGGCACGTCGGCGTTGTACGGGCTGGCGCAGTGCACGAGGGACCTGGCGGCGAGCGAGTGCCGGAGGTGCCTGAGCGGCTATGTCAATGACCTCAGCAACACCTTCCCCAACAACAGCGGCGGCGCCATTAAGGGGTACAGCTGCTACCTCAGGTACCAGCTTTGGCCGATAGACATCACGCTGCCCCCGCCGCCGTCGCCGCCTCCGGCACCGCCTGCACCTCCTCCTCCCTCGGTGTCGATAGGACTCGTGGCCGGATTGACCGTCGGCGCCGTCTCGTTCGTGGTGGTTCTTGGTGTCTCAATCTGGCTCCTCTTGCACCGCCGGCGGAAGCACGCCGGCCTAACGATGGAGCAGGAGATGGACGAGGGTGACTTCTTCGACGATGAGGCCGGTGACTTTGAGAAGGGGACTGGACCCAAACGGTTCCGCTACGGCGAGCTCGCCATCGCCACCGACGACTTCTCCGACGAGCACAAGCTCGGGGAAGGCGGTTTCGGGTCAGTCTACAGAGGGTTCTTGAAAGAATTGAACCTTGACGTCGCCATTAAAAGAGTGTCCAAGAGCTCAAAGCAGGGGAGGAAGGAGTACGCGTCGGAGGTGCAGATCATCAGCCGCCTCCGCCACCGCAACCTGGTGCAGCTCATCGGCTGGTGCCATGGCGGCGGCGAGCTCCTCCTCGTCTACGAGCTCATGCCCAATGCCAGCCTCGACACCCACCTATACAACCATAGCGCCAACGCGCTCCCATGGCCACTCAGGCACGAGATCGTGCTCGGGATCGGCTCGGCGTTGCTGTACCTGCACGAGGGGTGGGAGCAGTGTGTGGTGCACCGCGACATCAAGCCGAGCAACATCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCTGGTACAGTGGAGACGTTTGGCGCCGGTGAAAATGAGGGGAGACTTGGATACGCTAAGGGGCTTGTTGCTTGCCAGCTTCCACGAGACAGGAGATCTTCGCTGCAGTCCTTCGATCACTGA</cdnaseq>

Protein Sequence

<aaseq>MAPKHLPKDARFFRGKPIEDELELEAAGPRRFHYGELAAATANFSDDRRLGSGGFGSVYRGILSDGGVSRDVAVKRVAETSRQGWKEFVAEVRIISRLRHRNLVPLVGWCHDGGDELLLVYELMPNGSLDAHIHRTSGVAGWPVASDLVIFLLFLSVVVGSLCETAIGHHNLNLPYQPSCSTTGNYTGDSQYKKNLDQLFTSLSGGAIAGDWFNTSSVGTGADQVFGLIMCYADSNATECQKCLAMAPAVVQHPCRGSRSVNANYDACLLRYSDEPFFSELTTYGGNTNVSLDVDDTNLYVENMTAMNDTRWQLMSQLAERAGDTKLRLDNGSLPYVDSKLGTSALYGLAQCTRDLAASECRRCLSGYVNDLSNTFPNNSGGAIKGYSCYLRYQLWPIDITLPPPPSPPPAPPAPPPPSVSIGLVAGLTVGAVSFVVVLGVSIWLLLHRRRKHAGLTMEQEMDEGDFFDDEAGDFEKGTGPKRFRYGELAIATDDFSDEHKLGEGGFGSVYRGFLKELNLDVAIKRVSKSSKQGRKEYASEVQIISRLRHRNLVQLIGWCHGGGELLLVYELMPNASLDTHLYNHSANALPWPLRHEIVLGIGSALLYLHEGWEQCVVHRDIKPSNIXXXXXXXXXXXXXXXXXXSGTVETFGAGENEGRLGYAKGLVACQLPRDRRSSLQSFDH</aaseq>

Gene Sequence

<dnaseqindica>1..403#1673..3327#ATGGCGCCGAAACATCTACCGAAGGATGCAAGATTCTTCCGCGGCAAACCCATCGAAGATGAGCTGGAGCTAGAGGCCGCCGGGCCCCGGCGATTCCACTACGGCGAGCTCGCCGCGGCCACGGCGAACTTCTCCGACGACAGGAGGCTGGGGAGCGGCGGCTTCGGGTCGGTGTACCGCGGGATCTTGAGCGACGGCGGCGTGAGCCGCGATGTCGCCGTGAAGAGGGTGGCCGAGACATCTCGTCAGGGATGGAAGGAGTTCGTCGCCGAGGTGAGGATCATCAGCCGGCTCCGCCACCGCAACCTCGTGCCGCTCGTCGGCTGGTGCCACGACGGCGGCGACGAGCTGCTCCTCGTCTACGAGCTCATGCCCAATGGCAGCCTCGACGCCCACATCCACAGTTCGGGGAACGTGCTGCCATGGCCGGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCAGGTATTATTCATACTTCAATGCATCGAGAGAAGCACAAGAACCAGAAGGTCGTCCAAGTGCACGAGGAAACACAGAGAAGAAATCATGCATGTATGACCAGAGAAAGTATTCTAAACTATTAAAAGACCTCGTTCGGTTAATCTCTCCCATAAAGAAATCGCGGTGGATTCAGAGAAGATTTATTCTACATCTATTGTAGTACTGTGTAATATAATTATTCTCTCTCAATCCCTTCCAATCTCTCTCTTTGGGATTAAATTAACATGCTTTAAAAGGGAATGTCCTCTCGTGTGCTGCATATTACCTTAAAAAAATGTTTGTAAGATAGATTAATATGTGATATATCATTTTATAAGCATACAAGTTTAAATATGTCTTCTACAAGTTATAATAAAAAAAATATAACTGTATATACGCATACAAGTCAAAATTTAATTTAATTTTTTACAACTTGTAGAAGTTGTATTTGAATATGTTTGTGGAGCGATATACCATATTTTAAAATATATCTTGCTATTTTTTCAGTTCTTTTACATCTATTTAAATGGTAAAAGGGGGCATTCCTATTAGAATCTTTTCTGTTCATTAGCTGGTCGATCGTAGTGATAATAGAGAGGGGGGGGGGAACTATTTTTTGTCCATTAGGGGATATTCTTTTGCATGCCACTTAAGTATCTATTAAAAAGTTTGAAAAATATGGGTATGATAAATCAATATAAAACATGTCATTTCACAAACATAAAACATACTATTCGCTGTGAAATTTGTTATGTTTTCTATTCGTATAAAGTTTAAATTTGTATATTTGTGAAATAATATATCCTACTTTGCATAGGTTCAATACGTAAGAATTCACATTTGGCCAGTAAACCCAAGCATGTGCATGCATGCATGTCCAAGAGGGAAAAAAAATTGGTCCAACACATGTGAGTAGCTAGAAACGGCCCAAGTACGCGTAAGAGTAGAATTGTCCCCGCTTAAAAGAGACGAACTGCATATGCGTACGTCCAGTCATCCACACAAACTCAAATTTGCCATCAATTCTTTCATAAGTCTCTGTTATAAAACCAGCCCTAAAATCGACATCGGTAGCTAAACGCGAAGAAAACATCACAGGAGATCCACACAAACTCTAACAGTCTCCATCCCTAATTCGTCATCGAAAAAGCCTTCCTGTTCCTAGGAACTAGTGGCGTCGCTGGCTGGCCAGTGGCCTCGGACCTTGTCATCTTCCTCCTCTTCCTCTCCGTCGTCGTCGGCTCGCTATGCGAGACGGCAATCGGTCATCACAACCTGAACCTCCCGTATCAGCCGTCGTGCTCGACCACCGGCAACTACACCGGCGACAGCCAGTACAAGAAGAACCTCGACCAGCTGTTCACCAGCCTCTCCGGCGGCGCCATCGCCGGGGACTGGTTCAACACCAGCTCGGTCGGGACGGGCGCCGACCAGGTGTTCGGCCTCATCATGTGCTACGCCGACAGCAACGCGACGGAGTGCCAGAAATGCCTCGCCATGGCGCCCGCTGTGGTCCAGCATCCGTGCCGCGGAAGCCGGTCGGTGAACGCCAACTACGACGCCTGCCTCCTCCGCTACTCCGACGAGCCCTTCTTCTCCGAGCTCACCACCTATGGCGGCAACACCAACGTTTCCTTGGACGTCGACGACACGAACCTCTACGTCGAGAATATGACCGCCATGAACGACACGCGGTGGCAGCTGATGAGCCAGCTCGCCGAGAGGGCCGGCGACACCAAGCTCAGGCTGGACAACGGCAGCTTGCCGTACGTCGACTCGAAGCTCGGCACGTCGGCGTTGTACGGGCTGGCGCAGTGCACGAGGGACCTGGCGGCGAGCGAGTGCCGGAGGTGCCTGAGCGGCTATGTCAATGACCTCAGCAACACCTTCCCCAACAACAGCGGCGGCGCCATTAAGGGGTACAGCTGCTACCTCAGGTACCAGCTTTGGCCGATAGACATCACGCTGCCCCCGCCGCCGTCGCCGCCTCCGGCACCGCCTGCACCTCCTCCTCCCTCGGTGTCGATAGGACTCGTGGCCGGATTGACCGTCGGCGCCGTCTCGTTCGTGGTGGTTCTTGGTGTCTCAATCTGGCTCCTCTTGCACCGCCGGCGGAAGCACGCCGGCCTAACGATGGAGCAGGAGATGGACGAGGGTGACTTCTTCGACGATGAGGCCGGTGACTTTGAGAAGGGGACTGGACCCAAACGGTTCCGCTACGGCGAGCTCGCCATCGCCACCGACGACTTCTCCGACGAGCACAAGCTCGGGGAAGGCGGTTTCGGGTCAGTCTACAGAGGGTTCTTGAAAGAATTGAACCTTGACGTCGCCATTAAAAGAGTGTCCAAGAGCTCAAAGCAGGGGAGGAAGGAGTACGCGTCGGAGGTGCAGATCATCAGCCGCCTCCGCCACCGCAACCTGGTGCAGCTCATCGGCTGGTGCCATGGCGGCGGCGAGCTCCTCCTCGTCTACGAGCTCATGCCCAATGCCAGCCTCGACACCCACCTATACAACCATAGCGCCAACGCGCTCCCATGGCCACTCAGGCACGAGATCGTGCTCGGGATCGGCTCGGCGTTGCTGTACCTGCACGAGGGGTGGGAGCAGTGTGTGGTGCACCGCGACATCAAGCCGAGCAACATCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCTGGTACAGTGGAGACGTTTGGCGCCGGTGAAAATGAGGGGAGACTTGGATACGCTAAGGGGCTTGTTGCTTGCCAGCTTCCACGAGACAGGAGATCTTCGCTGCAGTCCTTCGATCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035864