BGIOSGA035867

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Revision as of 08:11, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035867| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035867, complete gene.| tag = OsI_390...")
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Gene Name

BGIOSGA035867

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035867, complete gene.

LocusTag

OsI_39055

Ensembl Transcript ID

BGIOSGA035867-TA

Ensembl Protein ID

BGIOSGA035867-PA

Length

4357

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21306109..21310465

Sequence Coding Region

21310304..21310465,21310004..21310228,21309396..21309455,21309130..21309192,21308795..21308834
,21308212..21308266,21307859..21308021,21307639..21307698,21307478..21307536
,21306785..21306866,21306522..21306585,21306109..21306194

Genome Context

<gbrowseImage1> name=IndicaChromosome12:21306109..21310465 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:21306109..21310465 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCACCCTCCTCTCCCGGGCCGCTGCCGCCGCCGCCGTCTCCCTCCGCGGCGCCCGCTCGCACCACATACTGTCCTCCTCCCTCCCCAAGGAAACCCTCCTTCCTCCTCCCCTCCTCATCCTCCTCGCCACCACCATCGCCTCGCTCCTCGCGGTCGGGGGAAGAGTCGGATGGGCGCGCGCCGCCGAGGAGGGCGCCGGGTTCGGGTGCAGGGCGTCGGTGCCGGCGGCGCTGGGGGGCGTCGGTTCGTTCGGGATCGCGGCGCGCTGCAACGCCACCTCGTCGTCGGCCGTTTCGGAGGCTACCAACGCGCTGCCGAGGACGGAGCCCGTGGTTTCGGCCGAGTGGCTGCACGCCAACCTCAAGGACCCCGATGTGAAGGTACTTGATGCCTCTTGGTATATGCCTGCCGAACAAAGGAATCCTCTTCAGGAGTACCAGGTGGCTCATATTCCTGGGGCGCTATTCTTTGATGTTGATGGAATATCAGACAGAACATCAAGCGTCAACAAAAATAGCTTTAGGCAACACCAGAAAGTAAAAGATGGGATAGTAGTTTATGATGGAAAGGGACTATTTAGCGCTGCTCGTGTTTGGTGGATGTTTCGTGTTTTCGGACATGATAAAGTTTGGGTGTTGGATGGTGGTTTGCCCCAATGGCGTGCTTCTGGGTATGATGTTGAATCAAGTGCCTCTAGTGATGCCATCTTAAAAGCCAGTGCTGCTCGTGAAGCAATTGAGAAAGTTTATCAGGGGCAGTTGGTTGGTCCCTCCACATTTGAAGCAAAGTTGCAGCCTCATCTTATTTGGAATCTTGACCAGGTAAAAGAGAACATTGATGCCAAGACACATCAACTTATAGATGCTCGAGGAAAGCCTAGATTTGATGGTGCAGTTCCAGAGCCACGGAAAGGAATAAGAAGTGGGCATGTGCCTGGGAGCAAATGTGTTCCTTTCCCTCAGTTGCTTGACAGTTCGCAAAAGCTATTACCTCCAGAAGAGCTCCGTAAACGATTTGAACAAGAAGGAATCATTCGATATTCAAGTAATGAACTAAATTCTACACGGCAGCAGACCCTGTCGTCACTGGCTACAGACCATGTTCCTCCCTAG</cdnaseq>

Protein Sequence

<aaseq>MAATLLSRAAAAAAVSLRGARSHHILSSSLPKETLLPPPLLILLATTIASLLAVGGRVGWARAAEEGAGFGCRASVPAALGGVGSFGIAARCNATSSSAVSEATNALPRTEPVVSAEWLHANLKDPDVKVLDASWYMPAEQRNPLQEYQVAHIPGALFFDVDGISDRTSSVNKNSFRQHQKVKDGIVVYDGKGLFSAARVWWMFRVFGHDKVWVLDGGLPQWRASGYDVESSASSDAILKASAAREAIEKVYQGQLVGPSTFEAKLQPHLIWNLDQVKENIDAKTHQLIDARGKPRFDGAVPEPRKGIRSGHVPGSKCVPFPQLLDSSQKLLPPEELRKRFEQEGIIRYSSNELNSTRQQTLSSLATDHVPP</aaseq>

Gene Sequence

<dnaseqindica>1..162#238..462#1011..1070#1274..1336#1632..1671#2200..2254#2445..2607#2768..2827#2930..2988#3600..3681#3881..3944#4272..4357#ATGGCGGCCACCCTCCTCTCCCGGGCCGCTGCCGCCGCCGCCGTCTCCCTCCGCGGCGCCCGCTCGCACCACATACTGTCCTCCTCCCTCCCCAAGGAAACCCTCCTTCCTCCTCCCCTCCTCATCCTCCTCGCCACCACCATCGCCTCGCTCCTCGCGGTCGTACTCCGACGCCGCTCCGCCTTCTCCCTGATCTCTCCGGCCTGACGGTGGTTTGTGTGTTTTGTGCGGGTGCAGGGGGGAAGAGTCGGATGGGCGCGCGCCGCCGAGGAGGGCGCCGGGTTCGGGTGCAGGGCGTCGGTGCCGGCGGCGCTGGGGGGCGTCGGTTCGTTCGGGATCGCGGCGCGCTGCAACGCCACCTCGTCGTCGGCCGTTTCGGAGGCTACCAACGCGCTGCCGAGGACGGAGCCCGTGGTTTCGGCCGAGTGGCTGCACGCCAACCTCAAGGACCCCGATGTGAAGGTAGTGTGCGCAGTGATGGGACTGTAGCGATCTGCGGTTGACCTGTGAAATTGTTGCATATACTGTGCTACAACTAATAAACTGGAAGATAATTTTTGTGAATTGTTGCATATACCGTGCTACAGCTAATAAACTGATAGTGAATTGCTAGTTGCTGGCGTTCTACCATGCTGGCAGTTTGATTGATGATGGAAGAGAGATATAAATCGTAGGAGGATGGCTAGTGACTTATTATTGCTGAGTTTGTCGCGTTAGCTGTGCGGATTGATGGTTGAGGAAAAGCATGAGGTCTTTGTACTACAGACTACAGCACATTCAGGATGGCACTGGCTTTCCATTGGCTACTTTCGCTTTTACAACAGAAGCTGCATTTGTATTAAAGTTCTTTTTCATATGCATTATGATATACTCTCAGTAGGATAAATGAGTCTAGTATAATAATAACACTATAACAGTAGTCACTGGATAGTTTTCTTTTCCCTGTTAAAAATGTTTGTCTTCCTTGAGTCCACTATATCTCATTGAATCATCCTCTTGTTTCTGTCAAGGTACTTGATGCCTCTTGGTATATGCCTGCCGAACAAAGGAATCCTCTTCAGGAGTACCAGGTAGCGATTACATGCCATACTGAGGTTTTGCAGTTTTGGAATTCTTACCACCTGCTGTGACGCCATTGTTCTTATCTGATTGTTTATATGCTCTTATTTTCACTGGTTCCTTGTCACCTTAATTTTCTGTTTTTATCAGTTCATTTGAAATTATAGTAGCAGAAGTTCTGATGCTTTCATATGCATTTTAATCTTGTTTCCAGGTGGCTCATATTCCTGGGGCGCTATTCTTTGATGTTGATGGAATATCAGACAGAACATCAAGCGTAAGTTCAACTCACTAGCTTGTTTTTTCATTTACTACTAGCTAATCATATGAACTTTCTTTATGTGCCACATCATCCTGCTTTTCTGATGTTATTTTTTTATCAATATTACATTATAAATTGCCAGAATATGGGCTTGTGCTATGCAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTAGTTCAGTATGTCAATACATTTAAGTTCCACTCATACAGGTCAACAAAAATAGCTTTAGGCAACACCAGAAAGTAAAAGGTTGAAGCTGGTGAAGTAAAACAGGGACTGACAGATCACAACACAGTTGATAACATTTGTGTGTGTTGTGATCTGGTGGTCTGTCCCAATCCCCTGATTGGTGTAAAAAAAGTGATAATAAGTTACTCAAGTTTGATTTCTTTCAGATCACGTCAAGCTTTTATATTGTACTAGCTGGTGTAATGGCACTTAAATTTTCTTTCCCTTTCTCCTTGACTGTATTTTTCATCTACTACTGTCAATCTTCATGATAAAAAAGTAACACTAGTAAATTAACATGTTTTTTTAATCCTGTTTGGTTAAGTAGATCAACAATTCAACATAATGCCCTTATTATGATAGGAATATGAATTGCAAAACATGGCATCATTCTTGATTTCTTTGTGTTGGTTATTGTTGAGCTGATTAATTGTTTTTCGGCATGCTTGATATCATTGAATGTATTATCTTTTGAGTCAGTTGCCGCACATGCTGCCATCTGAAAAGGCATTTTCTGCTGCTGTATCTTCGCTTGGAATATACACAAAGATGGGATAGTAGTTTATGATGGAAAGGGACTATTTAGCGCTGCTCGTGTTTGGTGGTAAGCTGCTTCTTCTCGAAACCAAAGTAAACATCGAAGAGTAGAATTCAGGCAGAAACGACAGACAATCTTTTTTCCCCTTAAATGATCATAAGCCGTTCTTACTAGTGCATTTGCAATATGTTCCTTTGTTGTTAATTTTGATAATGGAATTAAATTTCATGTGCGATGCCTGCTTCCTTGATATCAGGATGTTTCGTGTTTTCGGACATGATAAAGTTTGGGTGTTGGATGGTGGTTTGCCCCAATGGCGTGCTTCTGGGTATGATGTTGAATCAAGTGCCTCTAGTGATGCCATCTTAAAAGCCAGTGCTGCTCGTGAAGCAATTGAGAAAGTTTATCAGGGGCAGTTGGTAAGTTGAATTAAACCTCTATTTTGTTTGTTCTAACATTTGGACCTTACTCCTGTTATGTACTTGTCAACCCCTGAATCGTGATACTCATGCTAGTAGCTGCTGTGAATGGTGCTTAGCTTGACCTTCAGTCACACATAACTTTTTATTATCTTTGTAGGTTGGTCCCTCCACATTTGAAGCAAAGTTGCAGCCTCATCTTATTTGGAATCTTGACCAGGTTAGAGGTCTTCAGGCTGAAAATCTTGCCCATACATTTCTTCACCATTTATTAAACTCAGTCGCATGTTTGGTATAACTAGTTCATGATTTTTTTTCTCAGGTAAAAGAGAACATTGATGCCAAGACACATCAACTTATAGATGCTCGAGGAAAGCCTAGGTAAATCTGCTATTTTAATTCTGGAAAAGTCCAGATTATATACCATACACGATTACATGTATATAAAGCCTTTACCTTTATGCTTAAGGATCCATTGGGTTATGGTGGATTTTATAAAAGGCACTTCCAATTTTGGAGACAATGGCAAAATTTTGCAGGAATCATTCGATATTCAAGTAATGAACTAAATTCTACACGGCAGCAGACCCTGTCGTCACTGGCTACAGACCATGTTCCTCCCTAGGCCTAGTACATTGATTTGGATAATATATCCATAGACTCACTAGTATCTGTCAAGATCTTCATTGCCAATAAAGTCGGCTGTTTGGCTTTTGCCTTTTTAAGTAATCTTTTTCCAGTTCAACCATGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACATAGTAGGCATTCCAGACTCTTATGGTGTTTTATCTTTTCGACTCTTCTGACTTTTTTTTTGTGTCAGTAATTGCTGTAGATTTGCCATATTACCTCATAAAAATGTGAATGCTTCAAGCTTCATTGGGTTGTGTCTTTGTAATGTTGGTCATTGGTCTTGAATACTAACATGAAGCTTTCACTTCAGATTTGATGGTGCAGTTCCAGAGCCACGGAAAGGAATAAGAAGTGGGCATGTGCCTGGGAGCAAATGTGTTCCTTTCCCTCAGGTGGAGACTTGCAATTATCCAATCAACTTGTACTCTTTTGGACATAAATTTTGGATAATTACTTTTACCTGATCTTTGGTTGTCTTTGGTCTCATTGGATTAATTATTTATTCGGGTTCATTTGTGACCATATTTTTGTATTTTTAATCTTTGTGTATTACCAATTCTTTTTGCTGAATCTTTGTTTGTTCTTCTGCAGTTGCTTGACAGTTCGCAAAAGCTATTACCTCCAGAAGAGCTCCGTAAACGATTTGAACAAGAAGGTAATATTTTTATCCAGATAAAGTTTCAAATTCTTTCTGTCTGCTGACAATGCCCTGCTTAGCCATGTTTGCAATCCTATTCCCCATTCTGAAACATGCCTATATCTTAACCATGAACCTAATGTTTTGGCCTTCTGGGTCTTTTGAAACATTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATACCATACACGATTACATGTATATAAAGCCTTTACCTTTATGCTTAAGGATCCATTGGGTTATGGTGGATTTTATAAAAGGCACTTCCAATTTTGGAGACAATGGCAAAATTTTGCAGGAATCATTCGATATTCAAGTAATGAACTAAATTCTACACGGCAGCAGACCCTGTCGTCACTGGCTACAGACCATGTTCCTCCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035867