BGIOSGA035875

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Revision as of 08:11, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035875| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035875, complete gene.| tag = OS12G06...")
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Gene Name

BGIOSGA035875

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035875, complete gene.

LocusTag

OS12G0605500

Ensembl Transcript ID

BGIOSGA035875-TA

Ensembl Protein ID

BGIOSGA035875-PA

Length

6408

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21117298..21123705

Sequence Coding Region

21123655..21123705,21123233..21123292,21122100..21122269,21121306..21122011,21120582..21120988
,21120428..21120499,21118888..21119065,21118713..21118808,21118554..21118620
,21117763..21117931,21117298..21117664

Genome Context

<gbrowseImage1> name=IndicaChromosome12:21117298..21123705 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:21117298..21123705 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACACGCCGGATAGGCCCCCCCGCGCCGCCGCCACCGCGGCCGTCGAGATGTTGCGGCCATTCGCCGCTCCGGATTGGGGCCTAATCGTGCTAGAAGTCTCGATTCAGGACTCTCCTGTCTTCAATTTCATCAACAGCCTATCTCCTATACCACCACCTAAGCCTTCAGACTCAGCACATAATGTTCAACTATTCAAGTCATCAGACTTGGCTCCTGTTTCCTCAATCTTTGCCTCACCACATGTCAATCCTGCAAAGGAATCTAAACTTCCAATCAGGGAAGATTCTGTTCAACTTTCTCGAGAATCGCACTCTCCGAACAGTGTCAGAACTCGAACAGGGGCCACAAGCTCTATTATTAGAATGATCAGATGCAAAAACATTGTTTCAGAAAATTGCAGTATAACTTGTTACCTAAATGATTCAACTTCAAGTAAAGCATCTCAACCCATCCAGCTTTGTGGCGGCAGTGCAGAAAGTGATACGAATCAAAATACTGATGGTAAAAAGGATCCCACTACAGAGCAAGACCGTACAGACATAGAATTCGTCCTACTTGATCAGTGTGGACCAGAAAAAATGGATTCATCACAGTCAGGTAATAATGCTTGTGAAAACCAACTGTCTGAACAACACAAGGATGAACTTGGGTCATTTGATGGGGGTTACATGTTTGCACATCAACCACATAGTGATATGCTGAGATTAGCTCCACCATTTGAGTCAGAAACACAGTTAGTGAATGAGACATTACAAACAGATAATGTCTACTGTGAAACCTTGTTGACCGATGGGCCAAGTGGCTCTTACACACAAAATTCTGCACCTGATCCTCATCTTTACTGGGCTGGGGCAGTTGAAGGGTGTGCAACAGATTATACCCCCCAAATGCTCCCTGGTGCTTGTCAAAGCCAGTTGGTGCCAAATGATCAAATCAATAACAAGCTCAACGAGCCCAGTGATTACATGCCAATGGACCACAATGTGTCATCACAGAATTTACGTGGCATGCGTAGACGTTGCCTTTTCAATGAAAAGAGTGGAGCTGCTAATGAAGGGGCAAAGAACTCCTCAGCTCGTCATTCTACAAATTCAACCACACCCAGACGCAAGATTAGTTCCAGTGATAACAACTTAAAGACTCTGAGGACCCCTCCATGTGCATTGCCTGGTATTGGCTTGCATTTGAATGCCCTTGCCACAGTGCCAAAGGATAAAATGGTTCCCCATAATGACATTCAATCCTCTTTGAATCAAGCCAGCAATGTTCCGTCTGCTGTTGGTTCTTCTCCACCAACAGATGATCCACATACTATAAATGATGACTCCTCCCAGACAGCCGTGGTTGCATATGTTGGTGAATCGAGTCAGGGTAGTCCCAAGAAGAAAAGACACAAGTTCGACAATGGTGATGGCACGTCGTGCAAGCGTTGTAGCTGTAAGAAGTCAAAATGCTTGAAGCTGTACTGTGAGTGTTTTCATGCTGGTGTCTTTTGTTCAGAACCTTGTTCGTGTCAAGGCTGTCTGAATATGCCTAGCAACATGGAAACAGTTCTATCGACTCGAGAGCAGATTGAGTCTCGTAATCCACTTGCATTTGCTCCTAAAGTAATTCGCACTGAGCCTGGTCAGGAATTAGCTGATGACTCTAACAAAACTCCTGCTTCTTCTCGTCACAAAAGAGGCTGCAATTGTAAGAAGTCATCGTGTTTGAAAAAATACTGCGAATGTTATCAGGGTGGTGTTGGATGCTCTGTGAGTTGCCGATGTGAGGGTTGTAAGAATGCTTTTGGGAGGAGGGAGGGAGTTGCACTGTTAGGCATAGAGGAAGCTAAGCGTGGATGCGAAGAAAAGGATGGAGGCGTGAAGGAAGAAACCACTGATAATGATAAGCAGCTTGTTATCTATCAAGATAGTATCAACCTTACTCCTGCTGAGAGTGTGCTGGCAACACCTTCAGTTGTGGATTACAGACCCTTGGTTGCTCTTCCACCTTTGAGCTCCAAGAAGCCAAGATCGTCGACGAAGCTTGGTGGATATTCTTCTCGACTTGAAGGACACCTGAAGTCTGACATTCTACTCTCTCCATTCGAAAGCTACGCAGAAATGATGCTCGGGGATGGTACATCAAATGTCCTAAAAGGGGAATCATCCCCTCAAACTTCTGTCAAGGTCGTGTCACCTAATAAAAAGAGGGTCTCTCCCCCTCGCATTGGTACCGGATTGTCTCCGATCTGCAAGAGTGGCAGGAAGTTGATTCTCAAGTCCATCCCTTCATTCCCTTCTCTTGGTGTCGACATTACTAACGAGGATCCAAACACTAGTTCGCTAGCTCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MDTPDRPPRAAATAAVEMLRPFAAPDWGLIVLEVSIQDSPVFNFINSLSPIPPPKPSDSAHNVQLFKSSDLAPVSSIFASPHVNPAKESKLPIREDSVQLSRESHSPNSVRTRTGATSSIIRMIRCKNIVSENCSITCYLNDSTSSKASQPIQLCGGSAESDTNQNTDGKKDPTTEQDRTDIEFVLLDQCGPEKMDSSQSGNNACENQLSEQHKDELGSFDGGYMFAHQPHSDMLRLAPPFESETQLVNETLQTDNVYCETLLTDGPSGSYTQNSAPDPHLYWAGAVEGCATDYTPQMLPGACQSQLVPNDQINNKLNEPSDYMPMDHNVSSQNLRGMRRRCLFNEKSGAANEGAKNSSARHSTNSTTPRRKISSSDNNLKTLRTPPCALPGIGLHLNALATVPKDKMVPHNDIQSSLNQASNVPSAVGSSPPTDDPHTINDDSSQTAVVAYVGESSQGSPKKKRHKFDNGDGTSCKRCSCKKSKCLKLYCECFHAGVFCSEPCSCQGCLNMPSNMETVLSTREQIESRNPLAFAPKVIRTEPGQELADDSNKTPASSRHKRGCNCKKSSCLKKYCECYQGGVGCSVSCRCEGCKNAFGRREGVALLGIEEAKRGCEEKDGGVKEETTDNDKQLVIYQDSINLTPAESVLATPSVVDYRPLVALPPLSSKKPRSSTKLGGYSSRLEGHLKSDILLSPFESYAEMMLGDGTSNVLKGESSPQTSVKVVSPNKKRVSPPRIGTGLSPICKSGRKLILKSIPSFPSLGVDITNEDPNTSSLAP</aaseq>

Gene Sequence

<dnaseqindica>1..51#414..473#1437..1606#1695..2400#2718..3124#3207..3278#4641..4818#4898..4993#5086..5152#5775..5943#6042..6408#ATGGACACGCCGGATAGGCCCCCCCGCGCCGCCGCCACCGCGGCCGTCGAGGTCCGGGATGCTGGGGCTCGCTCGTCGAGTGGACTTTTTTTTTTGGGGGTCGATTTTAGGAGGGGTTTCGGGTTAGGGGGCGGCGGCGGCGGCTGCGGGGGGAGCCGATTTGGGGCTTCGGTTTATTTGTTTTTTATTTATTTATTTTTACTTCTGATTTTTGTTTTTTTTGGGGGGTTGGATTCGCTCGTCCAGTTCATTGGTGGGGGGATTAAGCGGGTGTGTTGGGTGGGGGGATTAGGGGTTTTTGCTCATCCATTGTTGAGCTTAACGCGGTGCTGGATTTGAGGGATGGAAGGGGGTTTTGTAGGAGGAGATGTTGTGGGGTTTGATTCCGTGTCTAATCAACATGATCTCCCTAGATGTTGCGGCCATTCGCCGCTCCGGATTGGGGCCTAATCGTGCTAGAAGTCTCGATTCAGGTTTGCTTGTCTGAATATCCATTCCGTTTCCTATCAGAGCGCTCTGGTAAGAGAGATGGGCTGTTTTAGTTGGGGGAACTAAGTGCAATAGATCCGTGGCTCACAGCAGTGTGGTTCGATTTGGTTCAGTTGTCCATGTCAAATGTCGAGAAAATGGATGATTTGTGTTTAGGGAACCATTGCTTAGATCTGTGGCTTAATGCAATGCTCGCTGATTTGATCGATTCTGGTTCAGCTGAGGAGCTCCATTGGGCATTCTACTTGATCATGGAAGAATCCTTGTGCTAGTTAGGATCTGGTTTTTTTTTTGTCGTGTCTTGCACTTCCTGTTTTTTCTGGAACGCTTCTGAACTTTGACCTGGCTAGACTGAACAACTATTTGATCTAACAACTATTTGATCTAAGCTGTTCAAAGTACTTAGGCCCTTTTGTTTAGGCTTATAAGCCAACTTATAAGTCAAAAAGTCAGCCTAAACAAACAAGCAGCCTTTTCGTTTGGCTTTTTTGAAGCCATAAGGCACTAACTGTTAAGCCAAAAGCTAGGTTGGAGAAACATTTTTTTGGCTTATGTGAGCTAGATGTATGACACCACCACTAAACTTAGGACATTATCCACCGGCTTATAAATCATATAAGCCAATAAGCCTAAGCCTAAACAAAGAGGGCCTTAACAACCAACAGTAAACTGTTTCTGATGACTATCTGGGGATGACTTTAACTACAAGAAGATATGGGAAATCATGTATTTGCTTGCGGAAGCAGGAGGCTTTGATTGCTTTGGGCTATCCATAACTAATCGAAAACCGCGCATTACGTTTGGATTAGTATTTCACAGAATGCCTTATTACTTTAAGCTAACTTTTATACGCGTGAAGCTATTATGAAATGAAGACCTTCCATTTTAATTGTTGTCAAATGAAAAACCTTGCAATCTACTCTCTAATTCGTTTTTTGTGCCTGCAGGACTCTCCTGTCTTCAATTTCATCAACAGCCTATCTCCTATACCACCACCTAAGCCTTCAGACTCAGCACATAATGTTCAACTATTCAAGTCATCAGACTTGGCTCCTGTTTCCTCAATCTTTGCCTCACCACATGTCAATCCTGCAAAGGAATCTAAACTTCCAATCAGGTAAATTTATGCTATTTTCTAGTTGAATGTAATTTCATCCTTTTAGGCTTTAGCTTACTATATCTACATGTATCTCCATATTAACCAGGGAAGATTCTGTTCAACTTTCTCGAGAATCGCACTCTCCGAACAGTGTCAGAACTCGAACAGGGGCCACAAGCTCTATTATTAGAATGATCAGATGCAAAAACATTGTTTCAGAAAATTGCAGTATAACTTGTTACCTAAATGATTCAACTTCAAGTAAAGCATCTCAACCCATCCAGCTTTGTGGCGGCAGTGCAGAAAGTGATACGAATCAAAATACTGATGGTAAAAAGGATCCCACTACAGAGCAAGACCGTACAGACATAGAATTCGTCCTACTTGATCAGTGTGGACCAGAAAAAATGGATTCATCACAGTCAGGTAATAATGCTTGTGAAAACCAACTGTCTGAACAACACAAGGATGAACTTGGGTCATTTGATGGGGGTTACATGTTTGCACATCAACCACATAGTGATATGCTGAGATTAGCTCCACCATTTGAGTCAGAAACACAGTTAGTGAATGAGACATTACAAACAGATAATGTCTACTGTGAAACCTTGTTGACCGATGGGCCAAGTGGCTCTTACACACAAAATTCTGCACCTGATCCTCATCTTTACTGGGCTGGGGCAGTTGAAGGGTGTGCAACAGATTATACCCCCCAAATGCTCCCTGGTGCTTGTCAAAGCCAGTTGGTGCCAAATGATCAAATCAATAACAAGCTCAACGAGCCCAGTGATTACATGCCAATGGACCACAATGTATGTATTCTTCTTGCTACTACCCAATTGGAGATATTCACTTGTTGGTTTTGCTGATAAATCATAGCAAATTCTTTGTCTAACTAAATGCAGCAGTGCATTTATAAACAATATATTAAGAGCTTGAAAATTAAATTAACCAGCAATTTGGCAAACAAAGGTCTTCTCTTCATGCATTTTTTTCTTTGTGACACGCTCAATTTGATAACCTAAGTTTCAATGTTTATATATTGCTAATCTGAATTGAAGTATCAATGTTTATTCTTGTGGGTCGTGGTAATAAACTAAGCAAACAATCTGTTTTCTTGTTTCGGTAGGTGTCATCACAGAATTTACGTGGCATGCGTAGACGTTGCCTTTTCAATGAAAAGAGTGGAGCTGCTAATGAAGGGGCAAAGAACTCCTCAGCTCGTCATTCTACAAATTCAACCACACCCAGACGCAAGATTAGTTCCAGTGATAACAACTTAAAGACTCTGAGGACCCCTCCATGTGCATTGCCTGGTATTGGCTTGCATTTGAATGCCCTTGCCACAGTGCCAAAGGATAAAATGGTTCCCCATAATGACATTCAATCCTCTTTGAATCAAGCCAGCAATGTTCCGTCTGCTGTTGGTTCTTCTCCACCAACAGATGATCCACATACTATAAATGATGACTCCTCCCAGACAGCCGTGGTTGCATATGTTGGTGAATCGAGTCAGGGTAGTCCCAAGAAGAAAAGGTACTTTGTTTCTATGCCCATTATTATAGGTCATGAGAACCATTTCGCTGGGCAAATCATGAAACACAATAATGCTATGCAGACACAAGTTCGACAATGGTGATGGCACGTCGTGCAAGCGTTGTAGCTGTAAGAAGTCAAAATGCTTGAAGCTGTAAGTTGTTCTACACCTTCTTTTCTCAATTGTTTCTCATAATATGCAACAAGCCAACCAGGTTAATTCAGAGTGAAAACATGTCAAGATATTGGTTGGTCTGAGGTATCAATTGTTTATTAGTGCTTGAGGTTTAGGATGAACACGTCCATGTTTTTTTCCTGTTTATGAAGTAGTGGCGGTGAGATAAACATATATGGTGTATCAGGCACTCCAAGTTTTGGGTGGAGTGCATAATAGAAAATAATTGCTTTGATCATATATGATTTATGACAAGTTGATGCACAGTGTTCAGGCTTCCTTTTCCAGTCATATCTACAGTATCATTTCTTCAACTGTCACACATTCCTGAGCTTGTAGATGTCAACATATTGCCCTGGGCTAGTTTTTGGGACTGTGTACTGCTCCATGGAATCTAGTTAGCTATGTTAATTTTAAAACTTCTTCTGTCCTGCCTCCAAAAAAGAAGCTTTTGCAAGTAGCTTTGTATTAAAAAATTGAAAAATTTAGGAGCTTCTGAAACGGCACTACAATCTTTGTTTCAGAAACATGGTTAGAAAAGTTTTTTGTCACAATGCACAAGCTGTCAAATTTCCAGTTGGGTATCATTTGTAAACTAAAATAGACCGATATGGCTGGTAAGCATGGGAGAATGGATAGTCAGAAGTGAAAAACCAATAAAAATAATTTAATGCCCTGTGGCTGGTTTGGACTCATGCAGTTGGGAAATGGGACCACCCACAGTCACTACTGTAGCATTGTTGCAAAAGGAAAGTGATAACTCTCTAGGCTTGTCAGTTTTCTTCTTAATGTTGTTGAGCCCCACCATTGTCTTTCTGTCGTTCACATGTGTGCAACAAATTTGATGATGATGAGGACAATTCAACATGAGCAATCCTAAAACAGAAAGCTGATGTTATGCCTGTGGAACATGTCATTTTGCTTGTTTTCCTAGACATGGTTAAATACTAAAAAGCACAATACTTGAGTTTGCAGTGGACCATTCTGCTGATATTACTAGTACAATAGGCCTGATATTGATACATGAAATTTGATCTTCTGGATAGCCATTTCTTATGAACAAAATTACAGACTGCTATACTGTTGACATGGACCTGCAGGGCATGCACTTGCTGCATGTTCAGGTTTCTCTTGGTTCTCTAGCCGTCTAGCAATTTTATTAAGTTAGCATTAGAAAATAAGAAACCATTTTAGATGTTTCTGAATCTCCATATTGCTCCTTTGAAGAGTTTCATTTGTTATTTACAAGATATTTCTGGAGAAGTTCTGTCTTCTTGTTGGGATGTGTTCTGTCAAGCATCATCTCTAATATAATGTCATTGTTGGCTAATTCTTATGCAGGTACTGTGAGTGTTTTCATGCTGGTGTCTTTTGTTCAGAACCTTGTTCGTGTCAAGGCTGTCTGAATATGCCTAGCAACATGGAAACAGTTCTATCGACTCGAGAGCAGATTGAGTCTCGTAATCCACTTGCATTTGCTCCTAAAGTAATTCGCACTGAGCCTGGTCAGGAATTAGCTGTAAGAGCCACTCTCTTTGTTTTACTTCCTTTCTCCTTTGTTACGTGCTACTGCTCATATAATCCTTGCTATATTATAGGATGACTCTAACAAAACTCCTGCTTCTTCTCGTCACAAAAGAGGCTGCAATTGTAAGAAGTCATCGTGTTTGAAAAAATACTGCGAATGTTATCAGGTTCTAGCTCTTACACGAGGTCATGATTTGACATTCTTTTCTTAGCCCCTTGGCATTTGTCTCACTGTCACTTTTCTTAAAAAAAAATGAAGGGTGGTGTTGGATGCTCTGTGAGTTGCCGATGTGAGGGTTGTAAGAATGCTTTTGGGAGGAGGGAGGGTAAGTTTCATCTTGACATCCTGTTTTATAAATGTGCAAAATGCATGCATTGCTCAAGATTAGTTGCATCTGTGGTATTTTATGTGATGTACATATCAGATACAAAGGAAAGGTTAGTTGGGAGAGGAGGTGCTCTTTAGGTTCATATTTGCTTCCAAATAGTATTTCATATGTTTCTAGAGGATTCAGCTTTGATCTTTCAACTTGTAAATTTAAATACAGGAGAGCACTAGGAATCTTAGAATATCTTGCATGCTATTCTGTTTGAAAATGTACTTCCTAGGTAAGATTTCATTGTAGGAATTGATGGAGTTACTTAAATTTGGAGGTTGGATCATTAATAATTTAAATTAAATTTGTTTTTTTACTGGAAATTAAATGATTGTGGGGGATGCACATAGAGAACCCTGAAAGGGAAATCATCCCCTCAAACTTCTGTCAAGTGAGTAAAGACAATGGTAACCATCTTAGTAGGTCAAGTCTACATCATGTATAGCTGTTTCAGATTTTGTTCAACATAACAATTCCTATACTATAGCATTAGTAGGTACCTTTCTTTTTAGTTTTGCGAGGGTTTATAAGTTATTGGTTTTTTATGGTACTCTACCTTTTTCCATTGAAGGAGTTGCACTGTTAGGCATAGAGGAAGCTAAGCGTGGATGCGAAGAAAAGGATGGAGGCGTGAAGGAAGAAACCACTGATAATGATAAGCAGCTTGTTATCTATCAAGATAGTATCAACCTTACTCCTGCTGAGAGTGTGCTGGCAACACCTTCAGTTGTGGATTACAGGTCTGCCTCGTACAATTACTCATGTTACTGTGGATTCAATCTCTTCTGTAAAATGCTAAAATGTCAGTTTTCTTTTGTTCTTCTAATCTTCTTCCTAGACCCTTGGTTGCTCTTCCACCTTTGAGCTCCAAGAAGCCAAGATCGTCGACGAAGCTTGGTGGATATTCTTCTCGACTTGAAGGACACCTGAAGTCTGACATTCTACTCTCTCCATTCGAAAGCTACGCAGAAATGATGCTCGGGGATGGTACATCAAATGTCCTAAAAGGGGAATCATCCCCTCAAACTTCTGTCAAGGTCGTGTCACCTAATAAAAAGAGGGTCTCTCCCCCTCGCATTGGTACCGGATTGTCTCCGATCTGCAAGAGTGGCAGGAAGTTGATTCTCAAGTCCATCCCTTCATTCCCTTCTCTTGGTGTCGACATTACTAACGAGGATCCAAACACTAGTTCGCTAGCTCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035875