BGIOSGA035877

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Revision as of 08:11, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035877| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035877, complete gene.| tag = OS12G06...")
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Gene Name

BGIOSGA035877

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035877, complete gene.

LocusTag

OS12G0605300

Ensembl Transcript ID

BGIOSGA035877-TA

Ensembl Protein ID

BGIOSGA035877-PA

Length

3610

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21108566..21112175

Sequence Coding Region

21111862..21112175,21111742..21111807,21110789..21110939,21110612..21110704,21110465..21110528
,21108566..21109143

Genome Context

<gbrowseImage1> name=IndicaChromosome12:21108566..21112175 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:21108566..21112175 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCCGCGGAGGATCCCGCGAAGCCCCCGCCCCCACCCCCGCCGCAGCTCGAGGCGTCCGGATCGGACCCCGACGACCCCCTCCTCCGCGACCGCGTCGTCGTCATCGCCCCTCCCCCTCCCCCGCCACCACCACCACCACCACCAGCACCCGCCCCCGCCCTCCTCGCCCCCGCCGAGAACGCCTCCGCGGAAGCCGCCTTCGCCGTGCCGCCGGCGGCGATCGCGGCGGTGGTGGAGGCGAACGGCAACTCGGAGAAGAAGAAGAAGTCGGTGGCGTTCGTTTTTTGGTCTTCGATTTCCTGTTTTTGGAGGAAGACGGATGAAGGGGAAGGGTGCAAGTCGTGCAGCTGCAAGAAATCCAAGTGCCTTAAGCTTTATTGTGTGTGTTTTGCATCTGGATCACATTGTTCTGAATCATGTGGATGTGATCCATGTTACAACAAATCTATTCATGGTGTTCCACGGAGTACACCAGCCTTGCCTTTGAAAGCTGTTCAAACATTAGAGACTGGTCAAGATTCAGTGGAACAACTTATAAGATCCCCTATGGACTTTGGTAGAAGAAAATGCACTTGCAAAAAGTCAGGCTGCCTTAAGAAATACTGTGACTGCTACCAGGGAGGAGCAGGATGCTCCATCAACTGTAAATGTGATGATTGCAAGAACCCATATGGGAGAAAAGTTGGTGTTATTTTGGATGGTAAAAATATTCTTGCTGGACCAACACCAAATGAAAGGAATGGAACAGAAGCTGACTCAAGTGACGATGAAGAAGATGATTATTATATGAACCGACCACTCTCGCCTGTCTCCCCATCTCCAGTATCCAGAGAGTCTTCATTCCAACAGGAGACTTTAGTTGGCGTCGAAGTCCAGACTATGAATGGGCATCTATACCCAAAACCGCTTACCCAAGTGCGGCCGGAATCATGGCAGCTCACTAGGAGGCCTACTGAGGAAGTGCGAGGAGAGGCATGGCACTACTTGAGGAGGCCCAGTGAGGATGGAACATCCGATGTTATGGAAGGACATGCTGACCCCAAGTTTCAGAGAGACAATAAACAGCTGGAAAACCATGTTGATAGGTACAGCATTCCGCGGTGCATCGAGGTGATGAACGCCATGGCAGACCTCTCGCCGATCGAGAAGTCGCTCGCACCGGACGTCTTCTTGGATCCAAGCAATCGGGAGATTTTTCTTTCACTGACTGTAGATATTCGAACCATGTGGCTGAAGCGTAAGATGAAGAGCCTTGTGTAG</cdnaseq>

Protein Sequence

<aaseq>MSAAEDPAKPPPPPPPQLEASGSDPDDPLLRDRVVVIAPPPPPPPPPPPPAPAPALLAPAENASAEAAFAVPPAAIAAVVEANGNSEKKKKSVAFVFWSSISCFWRKTDEGEGCKSCSCKKSKCLKLYCVCFASGSHCSESCGCDPCYNKSIHGVPRSTPALPLKAVQTLETGQDSVEQLIRSPMDFGRRKCTCKKSGCLKKYCDCYQGGAGCSINCKCDDCKNPYGRKVGVILDGKNILAGPTPNERNGTEADSSDDEEDDYYMNRPLSPVSPSPVSRESSFQQETLVGVEVQTMNGHLYPKPLTQVRPESWQLTRRPTEEVRGEAWHYLRRPSEDGTSDVMEGHADPKFQRDNKQLENHVDRYSIPRCIEVMNAMADLSPIEKSLAPDVFLDPSNREIFLSLTVDIRTMWLKRKMKSLV</aaseq>

Gene Sequence

<dnaseqindica>1..314#369..434#1237..1387#1472..1564#1648..1711#3033..3610#ATGTCGGCCGCGGAGGATCCCGCGAAGCCCCCGCCCCCACCCCCGCCGCAGCTCGAGGCGTCCGGATCGGACCCCGACGACCCCCTCCTCCGCGACCGCGTCGTCGTCATCGCCCCTCCCCCTCCCCCGCCACCACCACCACCACCACCAGCACCCGCCCCCGCCCTCCTCGCCCCCGCCGAGAACGCCTCCGCGGAAGCCGCCTTCGCCGTGCCGCCGGCGGCGATCGCGGCGGTGGTGGAGGCGAACGGCAACTCGGAGAAGAAGAAGAAGTCGGTGGCGTTCGTTTTTTGGTCTTCGATTTCCTGTTTTTGGTACGTTGCGTGCTGCTAACTCGTTTTTGCTGTTTAATTTTTTTATATGTTTAGGAGGAAGACGGATGAAGGGGAAGGGTGCAAGTCGTGCAGCTGCAAGAAATCCAAGTGCCTTAAGCTGTAAGATTTTTCCTCTTCCCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAATGGTAGAATTGGCTCATGATCTTACCATAACACGATAGAGGGTGGAGAAATTGAGGGTTTATCATGTCCAGCTCCTCTTTGTTTGTTCGTATCATCTATCTCTAGGATGCTCTTGGAGTATCATTTTTTCACCGGGTGGTGATATAGTTTGCCATCGTTAAAGAATCCTGTGATAGTTTTCATGTAATTCTAGCTTCGATGATCACGCTTTTGAAACGTATGTTGGCGAAGGACCGATTACTTTTAGTTTGAGTCCTGCTTGAGAGTAAAAATTCTGTAGCACTAACAACATGTCAATGAGTTGTTAGGTACTTTATAGTTTATGAAGGGTGGTCCTTTTTTTGGGTATAAAATTTACTCTCCTTTTGTTTCTGTTATTATATTTTGCTGTAAAGTTTGGGCCTTAAACCACAACTCAGAGGAACTGGCTAATTTTGTTTTTCCTGATAATCTGCACATTAGTGCCATTAATGTAATTTGTCACCTCACTCTGAGTTTTGGGGAGGGGGGGGGGGGATTTTTATGCATGGAGATGCATGTAAAGAGGATGGAAATCCTGATATGGTTTGAGCACACCTGCATAAACCCCCATCCCACCTCCTGCAGGCCTAGACACAAACCCTGTCCAGCACTCCAGCCAGCCAAGAGCTTGTGTGCAACACCATGCTTTATGTTTATTACTGCTAAGTAATCATTTCTTTCTGTTTGTAACTGACACTTGATTTATGCTGTGGCAGTTATTGTGTGTGTTTTGCATCTGGATCACATTGTTCTGAATCATGTGGATGTGATCCATGTTACAACAAATCTATTCATGGTGTTCCACGGAGTACACCAGCCTTGCCTTTGAAAGCTGTTCAAACATTAGAGACTGGTCAAGATTCAGTGGTATACATTTTTCTTAAACAGAATCTTATTATTTTGGATTATTTTGTGTTCCTGGTTTCACTGTTCCTGGTATGATCTCTCTAGGAACAACTTATAAGATCCCCTATGGACTTTGGTAGAAGAAAATGCACTTGCAAAAAGTCAGGCTGCCTTAAGAAATACTGTGACTGCTACCAGGTTTCATATCTAGCTCTATCCTGTTAGTTTCTCATCTTTTGTCCACTCATGACCATGGATATGTTTTTCTTCTGTGTTTGAAGGGAGGAGCAGGATGCTCCATCAACTGTAAATGTGATGATTGCAAGAACCCATATGGGAGAAAAGGTAATACAATGTGTTGCCAATCCGATTTAGTAGATACAATTGTTTGAAGTAGAATTAATTGGATATATACCACATAAGTTTCATAACTGGGAAGGTGATTTGCACCAGCTATAGGAGTTAGAGATTTTGGTTGATCTTGTTTCAAATAGCAGATTTTTACAACCGTTTGCTTGCGGCTACAAGTAGCAGCTATCCCAGGATCCTTCTAATCAGGAGATTTAGGCTTCTAATGCTCCCAGAAATGTTTTTTTTTTCAATACATGGCTCAAAGAGATCACACTAGTTTGTATTTTATTTTTTATTGCTAAAGTTACAAAATCTGCACAGATAGGACTGTCTACCTGTTGCTATGGTCCAAACCCAGTAGGGCTCATTAGAGAGTAACAAAAGAGGGAGTTCTGTTGGTTGCAGTAGTTAAGGTAGAAAATTGTGCTGTTTTTGATTACATGCACGACCTGGTTCCTTTTCCTGTCAGGCAAATTCTGTTTGTCTCAGTTTAACCATCATGGTAGAACTTGGAGCTTTTCATTCCGTGGCCATCTCATTGTAGGGAAAACTAACTTGATCATCATGGTAGAACAAGGTGCCTTCTGTTCCATCATCAAGATAAACTGTTTGGTTGGCCCACAATCACAAAATACATTATAGAACCTTATCATATCTAACATATACACCTAATGCTGTGGAGGAACCTGGCAGGCTGGCACACACAGACATAGGGAGTTCTGGACTTATGATCGTTGTCAATATGTATCTGCAATTGTTAAATGCACATGAAAGTATGAACCGATAAATATGCTTGTTGTATTTTGTCACCACCAGTCCTGTGAAATTCATATACAAAATACCAAGGAATATTTAATAACGACAACTGCACAGCAATCAATGCAGTAATTTAGATTTTACTACACCAAAGTAAATAGTACTCCCTCTGATTTTTTTTTCAATTTTGAACTAACCGACGTCATACATTAAGTGATGGAGGTAGTAGTAAATTGTGGCTATACTAAAGAATAATCTGATAGAAGCAGCATTATGCTTTGGTTTTTATGTACATTGTTCTTAAGGAACAATATACCTCAACAAATACAAATTGAAGTTATTGTATAGGTCAGTACACTTTGGAATTATGTCTTCATTAAACCGGGGCCTCCAGAATAGCATGTTTTATGCTGCACATTAAGTTCAAATATGTCCTGTTGCAATTATTCTCCAATGATGACATTTATGGCTTGCCCTGACGGAGGAAGTCTTTGATTTTTTTTTTTGGGTATGAATTGCAATCTGTTGCTAAAATTTAAATATTGCTCATATTCTGCAGTTGGTGTTATTTTGGATGGTAAAAATATTCTTGCTGGACCAACACCAAATGAAAGGAATGGAACAGAAGCTGACTCAAGTGACGATGAAGAAGATGATTATTATATGAACCGACCACTCTCGCCTGTCTCCCCATCTCCAGTATCCAGAGAGTCTTCATTCCAACAGGAGACTTTAGTTGGCGTCGAAGTCCAGACTATGAATGGGCATCTATACCCAAAACCGCTTACCCAAGTGCGGCCGGAATCATGGCAGCTCACTAGGAGGCCTACTGAGGAAGTGCGAGGAGAGGCATGGCACTACTTGAGGAGGCCCAGTGAGGATGGAACATCCGATGTTATGGAAGGACATGCTGACCCCAAGTTTCAGAGAGACAATAAACAGCTGGAAAACCATGTTGATAGGTACAGCATTCCGCGGTGCATCGAGGTGATGAACGCCATGGCAGACCTCTCGCCGATCGAGAAGTCGCTCGCACCGGACGTCTTCTTGGATCCAAGCAATCGGGAGATTTTTCTTTCACTGACTGTAGATATTCGAACCATGTGGCTGAAGCGTAAGATGAAGAGCCTTGTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035877