BGIOSGA035880

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Gene Name

BGIOSGA035880

Description

cDNA clone:J023075D08, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA035880, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA035880-TA

Ensembl Protein ID

BGIOSGA035880-PA

Length

3457

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21073422..21076878

Sequence Coding Region

21076793..21076878,21076599..21076665,21076263..21076328,21076125..21076171,21075988..21076033
,21075809..21075889,21075670..21075712,21075530..21075579,21075371..21075452
,21075233..21075282,21075023..21075096,21074873..21074924,21074315..21074770
,21073422..21073997

Genome Context

<gbrowseImage1> name=IndicaChromosome12:21073422..21076878 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:21073422..21076878 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCAGTATGAGGTGCTGGAGCAGATTGGGAAAGGGGCGTTTGGCTCGGCGTTGTTGGTGAGGCACAAGCTGGAGAAGAAGAAGTATGTGCTGAAGAAGATTCGGCTTGCGCGGCAGACCGACCGCACCCGCCGCTCTGCGCACCAGGAGATGCAACTTATTGCGACGGTCAGGAATCCGTTTATCGTGGAGTACAAAGATTCATGGGTGGAGAAGGGTTGCTATGTCTGCATTGTTATAGGATATTGTGAGGGAGGAGACATGGCTGAAGCTATTAAAAGAGCTAATGGTACATATTTCTCTGAGGAGAAGCTTTGCAAATGGCTTGTGCAACTTCTCATGGCTCTAGATTATTTACATGCAAACCACATTCTTCACCGAGATGTCAAGTGCTCCAATATTTTCATTGCCAGGGACCAAAGTATAAGACTTGGTGACTTTGGGCTTGCAAAAATATTGACTTCTGATGATCTGGCATCTTCTGTAGTAGGAACACCAAGTTACATGTGTCCAGAACTTCTTGCTGATATACCATATGGTACCAAGTCAGATATTTGGTCTCTAGGATGTTGTATATATGAAATGACCGCGCTCAGGCCTGCATTTAAAGCTTTTGACATGCAAGCGCTGATTAACAAGATCACGAAATCAATAGTCTCACCATTACCCACTAAATATTCTGGTGCCTTTAGGGGACTTATTAAGAGCATGCTGCGGAAAAGTCCAGAGCACAGACCTAGTGCTGCACAGCTACTCAAGCATCCACAACTTCAGCCTTATGTGCTGCAAGTCCAATTGAAATCTAGTCCTACTCGCAACATACTTCCAATCCATCAATCTTTGACTGACAAAGTTAAGAAGATGACATTTCCTAGTGACGTGGTTGATTCTGCACGCAGAAGAATGGCCAGGAGGAACTCTCTGGGAAATGAGAGGACTGTGACATTTAGCAAGCCATCTCCGGAACGGAATTCAGTTAGCTCTACACGGAGCATCAAAGAATACACAACCACCCAGAGTGTCGAAGGGCTCTCTGTTGACAGTAGTGAGGCTGGGGATGAGGTTACCAGTAAAGCCATCATAACAAAGACATCAAGCATCCTAAGGACGCCCAAGAGCTTGCCAGCCAAGACTTATACAGCTAGAAATCAGCTTGAACCTCCCAAAACATCGTATAACAGAACATACCGCTCTGAGCTGCCCTCAAAAACAACTCCAAACAAAATTGCCCGACCAGCAAGAAGAGCATCACTCCCGCTGTCAACATATGAAACACCCACCAAGCGCAGCATCAGCATTCTGGAACAACTAGACTCCCCTGACGTCTCTGTGAATGCCCCTCGAATCGACAGAATTGCGGAATTCCCACTGGCATCGTCTGAGGACCCCTTGCTCCCCATCCACAACAAGCTCTCTCCTGGCCATGGCTCATGTTCCACTCCTCCCTTTATCAACCGGTCAATCACCAAGGACAAATGCACGATCCAGGTGTTACGCACCGATGGGGACAACGGGAGCGACTCCTCAGGCCGCAACGCCACTGCTGCCTCGAGCCGCGGATCCAATGACTCCAGGCAGCAGCGGTTCGACACCTCGTCGTTCCAGCAGCGTGCCGAGGCATTGGAAGGGCTGCTGGAGTTCAGCGCGCAGCTGCTGCAGCAGGAGAGGTATGAGGAGCTGGGCATTCTGCTGAAGCCATTCGGACCGGAGAAAGCGTCTCCCAGGGAGACGGCCATCTGGCTCACAAAGAGCTTCAAGGAGACGGCATCATAG</cdnaseq>

Protein Sequence

<aaseq>MDQYEVLEQIGKGAFGSALLVRHKLEKKKYVLKKIRLARQTDRTRRSAHQEMQLIATVRNPFIVEYKDSWVEKGCYVCIVIGYCEGGDMAEAIKRANGTYFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFIARDQSIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGTKSDIWSLGCCIYEMTALRPAFKAFDMQALINKITKSIVSPLPTKYSGAFRGLIKSMLRKSPEHRPSAAQLLKHPQLQPYVLQVQLKSSPTRNILPIHQSLTDKVKKMTFPSDVVDSARRRMARRNSLGNERTVTFSKPSPERNSVSSTRSIKEYTTTQSVEGLSVDSSEAGDEVTSKAIITKTSSILRTPKSLPAKTYTARNQLEPPKTSYNRTYRSELPSKTTPNKIARPARRASLPLSTYETPTKRSISILEQLDSPDVSVNAPRIDRIAEFPLASSEDPLLPIHNKLSPGHGSCSTPPFINRSITKDKCTIQVLRTDGDNGSDSSGRNATAASSRGSNDSRQQRFDTSSFQQRAEALEGLLEFSAQLLQQERYEELGILLKPFGPEKASPRETAIWLTKSFKETAS</aaseq>

Gene Sequence

<dnaseqindica>1..86#214..280#551..616#708..754#846..891#990..1070#1167..1209#1300..1349#1427..1508#1597..1646#1783..1856#1955..2006#2109..2564#2882..3457#ATGGATCAGTATGAGGTGCTGGAGCAGATTGGGAAAGGGGCGTTTGGCTCGGCGTTGTTGGTGAGGCACAAGCTGGAGAAGAAGAAGTGAGCTTTTGACTCGACATTGTTCATCTCATTTTTCTTTCTTTCCTTTTTTTTTTGGCATTCTTGAAGCTCACTGTTATTTCAGCCATTTTGATCATGTTGGAGGTTTGTGTGTGTGTTTATGCAGGTATGTGCTGAAGAAGATTCGGCTTGCGCGGCAGACCGACCGCACCCGCCGCTCTGCGCACCAGGAGGTAAAAGCATCATCATCTCTGCATGAGCTGCATTTTTCAGCTTCTGGTACCTAGTAAGCTATGGTTTCAAGGGGAATGCCTTGTGTTCACCATGAGCTGCATAAATTGGTGTGTTGGGTGGTGGTGATGATGATGATGCTAGTGTGTTTAGTTTGGCTGGTGCTGAACTGATCTGAAACTGTGAAGTTAAAATGATGTGATGTCTTCTTGCTCTTGTGCGGTACTTCCTTTTTTTTTATACTGATTTATGTGGAAATGCTCCTCATGCAGATGCAACTTATTGCGACGGTCAGGAATCCGTTTATCGTGGAGTACAAAGATTCATGGGTGGAGAAGGTAGGTGAAAAGGACTGAAGAGAAGGTTATGAAGTTGGGAGGGTGGAATAGATTTGTTTCATTCTCACTTCTTTATCTTTGGATTTTTCAGGGTTGCTATGTCTGCATTGTTATAGGATATTGTGAGGGAGGAGACATGTATGTGTTCCTCTGATGAAATCCTTTTAAAATAGTTTATTTTGTTCTTGAACTTTAGTTCCTTAGCTAACACAATCTATAATCGGTTCAGGGCTGAAGCTATTAAAAGAGCTAATGGTACATATTTCTCTGAGGAGGTGTGGATTCTGACCTTGCATTTCCTTTGATACCTTAAAAATTGCTTTGCTGCAAACAAGGGATGTGCACTGAAATGTTTTTCTCATTTTTTTTTCAGAAGCTTTGCAAATGGCTTGTGCAACTTCTCATGGCTCTAGATTATTTACATGCAAACCACATTCTTCACCGAGATGTCAAGGTCAGTAGTAGTGCTAAACTTGGGAGTACCTTATAGTATTTATATTTCCATGGCATGGAAATAATATATACTAAAGCTGCTAAAAATTCGTTTCAGTGCTCCAATATTTTCATTGCCAGGGACCAAAGTATAAGACTTGGTATGTATCTTAGTCCCAAAAAGTATCATACTTTATGTATGGGTTTAGCAATCCTGGTAATGTTGCAATTCCAAATTTAAACCAATGCAGGTGACTTTGGGCTTGCAAAAATATTGACTTCTGATGATCTGGCATCTTCTGTAAGTAATTGTAGCACTTTTCATATTTCCAGTACATATTCGATGTCACTCTTAGTAGTATATTGCTCCCAACACAGGTAGTAGGAACACCAAGTTACATGTGTCCAGAACTTCTTGCTGATATACCATATGGTACCAAGTCAGATATTTGGTCTCTAGGTATATATGACTTCAATTTGAGAAACCACTTTCCTGCCCTAAATGGAAAACTTACTATTGAACTCTCATTTTTATTACTTTGTTTCAGGATGTTGTATATATGAAATGACCGCGCTCAGGCCTGCATTTAAAGCTTTTGTAAGTCCCTGTTTTGGTTTCTTTACTTTTACTGTGTGATGGTTTATTTGAGCATATGTTTAGATACTACATCTATGCTAATAGTAATGCAGTGTTATGAAACGTACAAGGGTCTAATTTTCTCATTTCCCTGCAGGACATGCAAGCGCTGATTAACAAGATCACGAAATCAATAGTCTCACCATTACCCACTAAATATTCTGGTGCCTTGTAAGTTTTGAACTAGTTGCCTTTTGTTGTTTCACCCTATTTTGCCCACCATCTTATCTGGATAGAGCATGCTTCTTAAATTTATATTCTGCGTGCAGTAGGGGACTTATTAAGAGCATGCTGCGGAAAAGTCCAGAGCACAGACCTAGTGTAAGTCCATTATACTATATCCTAGTTACTACTTTGTAATAGTTGCTGATGTATACTCCTATTTGTTTTGTGGTATAAATATTTACTAAATTTCCTGTACAGGCTGCACAGCTACTCAAGCATCCACAACTTCAGCCTTATGTGCTGCAAGTCCAATTGAAATCTAGTCCTACTCGCAACATACTTCCAATCCATCAATCTTTGACTGACAAAGTTAAGAAGATGACATTTCCTAGTGACGTGGTTGATTCTGCACGCAGAAGAATGGCCAGGAGGAACTCTCTGGGAAATGAGAGGACTGTGACATTTAGCAAGCCATCTCCGGAACGGAATTCAGTTAGCTCTACACGGAGCATCAAAGAATACACAACCACCCAGAGTGTCGAAGGGCTCTCTGTTGACAGTAGTGAGGCTGGGGATGAGGTTACCAGTAAAGCCATCATAACAAAGACATCAAGCATCCTAAGGACGCCCAAGAGCTTGCCAGCCAAGACTTATACAGCTAGAAATCAGCTTGAACCTCCCAAAACATCGTATAACAGAACATACCGCTCTGAGGTATTCCATTTTGTGCCTTTTTTTTCTATATTATTTGTGCACTCAATAATACCAGTGAACCTGTTCTTCATTTGTTTAGAAACTACAATAGCCTCAATTATAGCATGTGCTTGCTCAGTGCATACTACATTAGTGTTATTCAGCTTTTGGTCTTTTAGAGTTATTAAGATCTTGTCATGATGCAGTTGTTTCTTTATGCTATTTATGGCTTCAGCACGAGCTTGCATTTTGCATGATTATGCTGCCTCTTTCATTATTTGTCTGTTGAAATGAATGTGCCAATATTCATTGAGCTCCAATTTCTTCCACTTTTACAGCTGCCCTCAAAAACAACTCCAAACAAAATTGCCCGACCAGCAAGAAGAGCATCACTCCCGCTGTCAACATATGAAACACCCACCAAGCGCAGCATCAGCATTCTGGAACAACTAGACTCCCCTGACGTCTCTGTGAATGCCCCTCGAATCGACAGAATTGCGGAATTCCCACTGGCATCGTCTGAGGACCCCTTGCTCCCCATCCACAACAAGCTCTCTCCTGGCCATGGCTCATGTTCCACTCCTCCCTTTATCAACCGGTCAATCACCAAGGACAAATGCACGATCCAGGTGTTACGCACCGATGGGGACAACGGGAGCGACTCCTCAGGCCGCAACGCCACTGCTGCCTCGAGCCGCGGATCCAATGACTCCAGGCAGCAGCGGTTCGACACCTCGTCGTTCCAGCAGCGTGCCGAGGCATTGGAAGGGCTGCTGGAGTTCAGCGCGCAGCTGCTGCAGCAGGAGAGGTATGAGGAGCTGGGCATTCTGCTGAAGCCATTCGGACCGGAGAAAGCGTCTCCCAGGGAGACGGCCATCTGGCTCACAAAGAGCTTCAAGGAGACGGCATCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035880

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA035880&oldid=52185"