BGIOSGA035894

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Revision as of 08:12, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035894| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035894, complete gene.| tag = OS12G05...")
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Gene Name

BGIOSGA035894

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035894, complete gene.

LocusTag

OS12G0599550

Ensembl Transcript ID

BGIOSGA035894-TA

Ensembl Protein ID

BGIOSGA035894-PA

Length

3489

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:20752197..20755685

Sequence Coding Region

20755543..20755685,20754503..20754878,20753689..20753802,20753500..20753562,20752197..20752622

Genome Context

<gbrowseImage1> name=IndicaChromosome12:20752197..20755685 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:20752197..20755685 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATTCATGAATCGCCAAGATCCAGAAGCATCTGGGTTCTTCTCCGACGACGACTCCGGCGAAACCGCCGCAATCGCCGCCGCCGCCGCCATGGAGAACGAGGATTTCTCCTATATGCTGCGTGAATTTGACTACTACACAAGCAGTGAAGATCTCTTCGAGTTGATGTGGCAAGGAGGAGGAGGAGGAGGAGCCAGCAGCTTCGACCAGCCGCCGCCGCCGGTTTCCTACCACCGCCTGTCGCCGCCGCCGCCGGCGATGGGGACGACGACGACGACGTTACTGCCGGAGCAGCCACTAGTTGATGATCATCATCTCCCAGCTGCTGCTGCTGCTCCTCCATCGGAGGAAGAGATGGCAGCGTGGCTCTATCCGATCGTCAGTGGCCACGAAGTCGCCGGCGGCGGGTGGCGGTCGCCGGAGGCTCAGGATGACCGGCGAGCCGCACCGGCGCCGGAGAAGAAACAGATGGAGAAAATGCCGGCGGCGGCATCGCCAACGACGACGATGAATAAGGATGAAACAAGCGACGACTCCGGCGAGAGGAAGAAGAAGAAGGCGTCATCAGCGGCAGGAAAAGCAAGCAAGCATCACCACGCGGCTGCAGGAGCTCACAACCTTACAGAAAAAGCGGAGGTTCAGATAACTGAGAGGTTCAGGACGCTGCAGCGTCTCGTCCCCGGATGCGATAAGTCCAACCAGGCGTCGACGCTGGACCAGACAATCCAGTACATGAAGTCGCTGCAGCACCAGCTCAAGGCCATGTCCGTCGTCGGCTCGCCGCCGGCGCTGCTGTACCCCGCCGCCGTGCACCCGCAGTCGTACATGCATCCACCGCCACCGCCGCCGCCGGTCACGATGCCGATGCATCCAGGGATGGTTCTTGCTGCTCCTCCTCCAGGGGCGGCGCCGCCGCCCGGCCCTCCGGCGATGGTGCCATTCGGAGCTATGCTCCCTTACCCTCCCTACCCGGCGGTGCTGCTGCCGCCGCCGGCGGCGGCGACACTGTACGGACGGCCGCCGGCCCCCGCTCCCGGCGTTGCAGCTCGTCGACATGGATCCAGCGGCGGCGGCAGAATTAGCAAGAGCAGTAGCAGCAGCCTGTGCAAGAAATTGTAA</cdnaseq>

Protein Sequence

<aaseq>MAFMNRQDPEASGFFSDDDSGETAAIAAAAAMENEDFSYMLREFDYYTSSEDLFELMWQGGGGGGASSFDQPPPPVSYHRLSPPPPAMGTTTTTLLPEQPLVDDHHLPAAAAAPPSEEEMAAWLYPIVSGHEVAGGGWRSPEAQDDRRAAPAPEKKQMEKMPAAASPTTTMNKDETSDDSGERKKKKASSAAGKASKHHHAAAGAHNLTEKAEVQITERFRTLQRLVPGCDKSNQASTLDQTIQYMKSLQHQLKAMSVVGSPPALLYPAAVHPQSYMHPPPPPPPVTMPMHPGMVLAAPPPGAAPPPGPPAMVPFGAMLPYPPYPAVLLPPPAAATLYGRPPAPAPGVAARRHGSSGGGRISKSSSSSLCKKL</aaseq>

Gene Sequence

<dnaseqindica>1..143#808..1183#1884..1997#2124..2186#3064..3489#ATGGCATTCATGAATCGCCAAGATCCAGAAGCATCTGGGTTCTTCTCCGACGACGACTCCGGCGAAACCGCCGCAATCGCCGCCGCCGCCGCCATGGAGAACGAGGATTTCTCCTATATGCTGCGTGAATTTGACTACTACACGTATGGCAGCTATATCTACTTCTGTCACTCATTTATTGCATCGCAAGCTAGCATACATGTATATAGTTGGGTAGAACTAAAAAGGCAGTATGTATATATTATTGATGTATCATGCACAAAGCATATATATATATCTTGTACACTATTAGTGCTTCTTGCTCCAACTATATATATGAGCATTTAATTTACTTTCAAAATTAATAACAGTACTATATGAGCATGAAATTAATTCTACAGGAAGAGAAATTTCGCCTCCCTTGATTTGTATATATAGTGCATATATTTTGTTCAAAATCTTGGAAATTTGATTGTCTGAAATCGATCAAAATTAATACTACAAATTGATGTGCGTTCACGAAAAAAAAAACTACGAATTGGTGTTTTGTCTGATCGTATAAATATTCCTACAATGAATGTGACACATATATATATGTGGTATTGTATATGTGCATTTTGAACTGGTCATGAATTATACAGTAATTAGGAACAAATTAACGCAAGAATGAGATGTTCAACAACAAATTGATGGTCATGAGATGTCCTACTACTATATATACTAGTTGCATATGCATGGGATCAGCAAAGCATATATATGTTATCCAACTCTACGTGTCACTCAAGCCGTTGATGCATGCATATATATCTACGTCTTTCTCATGTACAGAAGCAGTGAAGATCTCTTCGAGTTGATGTGGCAAGGAGGAGGAGGAGGAGGAGCCAGCAGCTTCGACCAGCCGCCGCCGCCGGTTTCCTACCACCGCCTGTCGCCGCCGCCGCCGGCGATGGGGACGACGACGACGACGTTACTGCCGGAGCAGCCACTAGTTGATGATCATCATCTCCCAGCTGCTGCTGCTGCTCCTCCATCGGAGGAAGAGATGGCAGCGTGGCTCTATCCGATCGTCAGTGGCCACGAAGTCGCCGGCGGCGGGTGGCGGTCGCCGGAGGCTCAGGATGACCGGCGAGCCGCACCGGCGCCGGAGAAGAAACAGATGGAGAAAATGCCGGCGGCGGCATCGCCAACGACGACGATGAATAAGGTGCGTGTAATAATTCCATTAATTAATTTAGACAGGTCGGTATATATATGTGACTGTGATATGATTGAAGATGATCGGAGTAAATCATCTACAGAGTAATTTTTTCATGACTACTTATCTCCTTAAGAAATGAAATTACTTTCCCTAATTAATATCTAACTGAAAAATTATAGGATCGAGTGTAGCCCCTCAAAGTTTAAATTTAAATTCGTGTCCTTTTAAATTTGCTTAAACTTTTGGGTGAACTGTCTGGTGCGTAAACAATTCGATAATATCGATAGTTAATTAATTTCTCTTCGAACCAACCCTTTATCTCGCTTATTAGTTACTTCCTCCGCTTCATATTATAAGTCGTTTGATTTTTTTAATAAAATTAAACTTCTTTAAATTTAATCAAATTTATAAAAAATATACTAATAATATTTTCAATGCAAAACAAACTTATTATCAAAATATATTCAATGTTAAATGTAATGAAACTATTTTGTGTTGTAAATGTTGCTAATATTTTATAAGCTTAATCAAAAATAAAGAAATTTGACTAAGAAAAATATCAAACGACATACAGTGTGAAACGGATGAAGTACTTGATTAATAAGCTGATTAGTGAACCATATCTCTCAGCTGATCTCTGTACATTAATTCTGGAGCTGATCACTCTGAATCTCTGATGAGCCTGATCGTCATGCATGTATCACAGGATGAAACAAGCGACGACTCCGGCGAGAGGAAGAAGAAGAAGGCGTCATCAGCGGCAGGAAAAGCAAGCAAGCATCACCACGCGGCTGCAGGAGCTCACAACCTTACAGAAAAAGTGGGGATTCGATCGATGAACTCTTCACTAAATTTCATGTGTCCATATATACTAATATGAACTCTTGCATGCATCCATCCATCCATCTAGTTTAATTGATCGAAATTTCTGGATGCATCTGCAGAGGCGGAGGTTCAGATAACTGAGAGGTTCAGGACGCTGCAGCGTCTCGTCCCCGGATGCGATAAGGTCAGTCAGCGGTAAAAACTTTCAGTAATTTACTGTTTTTTTTTGGTAAATGATGTCCTGTTGTTTGTTTTTTATTTCATTGCAGCGAGATAGTTATGAAAATTTTTAAAACATTTTAAGAACATATATAGATCAATATATGCATATATCATTACACAAATTTGCAGGTTTAGATTTGAAAAGAAGAGATAAAAATATGGCTGTGAACATACACGTATTTAGATTTTAATTTGTTTCAACTTGTTTTTTGGATAATGGATTTTTTTTATTTTGACTTGTATAGGTAGAATTTAACTATTTTATTTATCTTGTCATGCGATTTAATTTAATTGAAATTAGAATAGCAAATGAAATTAATTACGAACAGATTATTAAAAATAATTAATCAATAGGATATCGATGTGTGTCGTCATGCATCGTGAGTGGACAAACTAAATGACTTAACTGAAGAATTTGTCGCATGCTGCTGCATGCGTGCGTGCATTCTCTGAATCAGAATCGATCAATTAATAATTTCTAGTACTACTACCTCAGTTTTTTAAAATAGATGACGCCGTTAACTTTTTCTCAAATGTTTGACCATTCATTTGATTCAAAAAATTTACATAATTATAATTTATTTTATTATGAGTTATTTTATCATTTATAGTACTTTAAATGTGATTTATATCTTATATATATATTTATATAAAATTTTTGAATAAGACGAATGGTCAAACATGTAAGAAAAAAATCAATGGTGTCATCTATTAAAAAACGGAGGGAGTACATGTCATATAAGTTTCCAAAAACAAATAAATTATATGTGTGCTTCGATCATCACTGACACGGCCGGCATCCATGGCGATGGATGGATGGATGCGTCCATAAATTTCAGTCCAACCAGGCGTCGACGCTGGACCAGACAATCCAGTACATGAAGTCGCTGCAGCACCAGCTCAAGGCCATGTCCGTCGTCGGCTCGCCGCCGGCGCTGCTGTACCCCGCCGCCGTGCACCCGCAGTCGTACATGCATCCACCGCCACCGCCGCCGCCGGTCACGATGCCGATGCATCCAGGGATGGTTCTTGCTGCTCCTCCTCCAGGGGCGGCGCCGCCGCCCGGCCCTCCGGCGATGGTGCCATTCGGAGCTATGCTCCCTTACCCTCCCTACCCGGCGGTGCTGCTGCCGCCGCCGGCGGCGGCGACACTGTACGGACGGCCGCCGGCCCCCGCTCCCGGCGTTGCAGCTCGTCGACATGGATCCAGCGGCGGCGGCAGAATTAGCAAGAGCAGTAGCAGCAGCCTGTGCAAGAAATTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035894