BGIOSGA035907

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Revision as of 08:12, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035907| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035907, complete gene.| tag = OS12G05...")
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Gene Name

BGIOSGA035907

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035907, complete gene.

LocusTag

OS12G0593000

Ensembl Transcript ID

BGIOSGA035907-TA

Ensembl Protein ID

BGIOSGA035907-PA

Length

4410

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:20398985..20403394

Sequence Coding Region

20403386..20403394,20402381..20403205,20401257..20401394,20401083..20401187,20400820..20400996
,20400448..20400625,20400027..20400274,20399708..20399874,20398985..20399582

Genome Context

<gbrowseImage1> name=IndicaChromosome12:20398985..20403394 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:20398985..20403394 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACACGTCGTCGTCATCGTCGTCCTCCGCTGCCGCCTCCGCCTCCGCGGGTGGTGGTGGTGGGGTTGCTGGGGCAGCGGCGGTGGATTCACCCACCTCCGTCATCGAGAACCACCACGCGGCTCTCCACCACTCCGCCGAGCTCCCGTCGACGCCCTCCGACGACGACGAGAACGCGGATGAGGACGACTACGATGGACGCAGGGCGGGTGCGCCGCCGCCGCCGCCGTTGAAGTCCCACCACCAGCCCATGGTCACCTTCGCGGAGACCAGCGGCTCCCTCCTCCAATCCTCGGAAGACGACGACGACGACGAGGAGGATGAGGAGGAAGACGAGGAATACGGCGAGGACGCCATGCCCGTGCGATCGAGCGGCTCCCTCTCCCCCGCGCACTGGAGGGGAGCCTCCAAATCCCGTGGTTGCTTCAGATGCGGGAAAGGGGGCAGCTTCTGGGCCCGCGGGGACAAGGAGGCTTGCCTCGCCTGCGGCGCGCGGTACTGCGGTGGTTGCTTGCTCCGGGCGATGGGGTCCATGCCGGAGGGGCGCAAGTGCCTGGACTGCATAGGGCGGCCGGTGGCCGAGTCAAAGCGGGATTCGCTGGGGAGAGGCTCACGTGTGCTGCGGCGGCTGCTCAGCGCCACGGAGGTGGAGCTTGTCATGAGGAGCGAGCGGGAATGCGCCGCCAACCAGCTGCGACCGGAGGACGTGTATGTGAATGGCACCAAGCTGTCGCCGGAGGAGCTCGTCATGCTGCAGGGGTGCCAGTGCCCTCCTTCTAAGCTCCGGCCGGGGTTCTATTGGTACGACAAGGTTTCCGGCTTCTGGGGAAAGGAGGGTCACAAGCCCCATTGCATAATAAGCCCAAATCTAAATGTTGGAGGCGCTCTAGATCAAAAGGCCAGCAACGGGAACACTGGGATCTTGATAAACGGCCGTGAGATTACGAAATCTGAGCTGCAAATGCTTAAGTTGGCAGGAGTTCAATGTGCTGGAAAACCTCACTTTTGGGTGAATGCTGATGGGACTTACCAAGAGGAAGGACAAAAAACAGTTAAAGGCAAGATTTGGGATAAGCCTATTGTGAAGCTGCTTAGTCCTGTCCTATCACTGCCAATGCCTAACAAAGCAAATAATCAATGCGGTGAAGAGCCAGTGAATGTGGTAAATCGACCCATCCCTGACTACTTGGAGCAAAGGACCATTCAGAAGCTCCTGTTGGTTGGATCAGGGACAAACACCATACTCAAGCAGGCCAAGTTCTTGTACAAGAGCAGACCATTTTCTGTAGAGGAGTGTGAAGATCTCAGACTTATCATACAAAGTAACATATACAACTACCTTGGTATACTACTTGAAGGGCGTGAAAGATTTGAAGAGGAAGCTATAGCTGACAGAAGAACTACCTGCCAAAGTGATCCTTCTAGCTCTGGCCATTGTGAACCAGAGCTTTGTAATGACATTACTGAGTACTATATTGCTCCACGCCTGAAAGCATTCTCTGATTGGATTCTAAAAGCTATGGCCATAGGTAATCTTGAAGACATTTTCCCTGCAGCTAGTCGTGAATATGCACCAATGGTTGAGGAACTATGGAAAGATCCTGCTATTCAAGCTACATATAACCGGAGAAGTGAACTGCCATTCCTTCCATCTGCTGCTAGTTATTTCCTTGACAAGGCTGTTGATATTTCCCGAACGGAATATGAGCTCTCTGATATGGATATCCTTTACGCTGATGGGATAACATCCTCAGATGGGTTAGCATCTACAGATTTCTCCTTCCCACAACTGGCTTTGGACGGGCGGGGTTTTGATGAGCCAGATCCACAAGACACTTTGCTAAGGTACCAACTAATAAGAATAAACAACAAAGGATTGCATGAGAACTGTAAATGGCTGCAAATGTTCGATGATGTGAGGCTTGTTATCTTCTGTGTTGCGGTCAGCGACTATGATGAGTACTACGAGGATGCAAACGGCAATGTTGTGAACAAGATGATGGAGACCAGGCAGCTATTTGAGAGCATTGCCCTTCATCCGATATTTGAGCAGATGGATTTCCTTCTACTTCTCACCAAGTTTGATATCCTAGAGCAGAAGATCGGCAAATCTCCTTTAACATCATGCGACTGGTTCAGCGACTTCACTCCCCTGGTAAGCCGCAATCTGATCAACGGCACCAGCAAAAGCTCGCGGGGCAGCTCCACTGGCTCGACATTGGCGCAGATGGCGGGTCACTACATTGCGGTGAAGTTCAAGAGCGTATTCCAGTCGTTCACGGAGCGGAAACTCTACGTGTCCTACGTGAACGCCCTGGACCAGGAGTCGGTCCGCTCCGCGATCCGCTATGGAAGGGAGATCATCAAGTGGGAAGACGAGAAGCCCGTGTTTGGGTCCAGCGAGACGACATACAGCGAGGAGCCGAGCTCCTACTCTCACTGA</cdnaseq>

Protein Sequence

<aaseq>MDTSSSSSSSAAASASAGGGGGVAGAAAVDSPTSVIENHHAALHHSAELPSTPSDDDENADEDDYDGRRAGAPPPPPLKSHHQPMVTFAETSGSLLQSSEDDDDDEEDEEEDEEYGEDAMPVRSSGSLSPAHWRGASKSRGCFRCGKGGSFWARGDKEACLACGARYCGGCLLRAMGSMPEGRKCLDCIGRPVAESKRDSLGRGSRVLRRLLSATEVELVMRSERECAANQLRPEDVYVNGTKLSPEELVMLQGCQCPPSKLRPGFYWYDKVSGFWGKEGHKPHCIISPNLNVGGALDQKASNGNTGILINGREITKSELQMLKLAGVQCAGKPHFWVNADGTYQEEGQKTVKGKIWDKPIVKLLSPVLSLPMPNKANNQCGEEPVNVVNRPIPDYLEQRTIQKLLLVGSGTNTILKQAKFLYKSRPFSVEECEDLRLIIQSNIYNYLGILLEGRERFEEEAIADRRTTCQSDPSSSGHCEPELCNDITEYYIAPRLKAFSDWILKAMAIGNLEDIFPAASREYAPMVEELWKDPAIQATYNRRSELPFLPSAASYFLDKAVDISRTEYELSDMDILYADGITSSDGLASTDFSFPQLALDGRGFDEPDPQDTLLRYQLIRINNKGLHENCKWLQMFDDVRLVIFCVAVSDYDEYYEDANGNVVNKMMETRQLFESIALHPIFEQMDFLLLLTKFDILEQKIGKSPLTSCDWFSDFTPLVSRNLINGTSKSSRGSSTGSTLAQMAGHYIAVKFKSVFQSFTERKLYVSYVNALDQESVRSAIRYGREIIKWEDEKPVFGSSETTYSEEPSSYSH</aaseq>

Gene Sequence

<dnaseqindica>1..9#190..1014#2001..2138#2208..2312#2399..2575#2770..2947#3121..3368#3521..3687#3813..4410#ATGGACACGGTGCAGCGAGCGCAAAAGCAAAGCGGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCCCGTCGTGCGCCCCCTCACGCCCTCCTCCCTCTGCTCCGCCATCCACGGCCACCGCGCCGGGGTTTCCTCCGCTGCTGCTGGTGCCGCCGCGGCGCAGTCGTCGTCATCGTCGTCCTCCGCTGCCGCCTCCGCCTCCGCGGGTGGTGGTGGTGGGGTTGCTGGGGCAGCGGCGGTGGATTCACCCACCTCCGTCATCGAGAACCACCACGCGGCTCTCCACCACTCCGCCGAGCTCCCGTCGACGCCCTCCGACGACGACGAGAACGCGGATGAGGACGACTACGATGGACGCAGGGCGGGTGCGCCGCCGCCGCCGCCGTTGAAGTCCCACCACCAGCCCATGGTCACCTTCGCGGAGACCAGCGGCTCCCTCCTCCAATCCTCGGAAGACGACGACGACGACGAGGAGGATGAGGAGGAAGACGAGGAATACGGCGAGGACGCCATGCCCGTGCGATCGAGCGGCTCCCTCTCCCCCGCGCACTGGAGGGGAGCCTCCAAATCCCGTGGTTGCTTCAGATGCGGGAAAGGGGGCAGCTTCTGGGCCCGCGGGGACAAGGAGGCTTGCCTCGCCTGCGGCGCGCGGTACTGCGGTGGTTGCTTGCTCCGGGCGATGGGGTCCATGCCGGAGGGGCGCAAGTGCCTGGACTGCATAGGGCGGCCGGTGGCCGAGTCAAAGCGGGATTCGCTGGGGAGAGGCTCACGTGTGCTGCGGCGGCTGCTCAGCGCCACGGAGGTGGAGCTTGTCATGAGGAGCGAGCGGGAATGCGCCGCCAACCAGCTGCGACCGGAGGACGTGTATGTGAATGGCACCAAGCTGTCGCCGGAGGAGCTCGTCATGCTGCAGGGGTGCCAGTGCCCTCCTTCTAAGCTCCGGCCGGGGTTCTATTGGTACGACAAGGTTTCCGGCTTCTGGGGAAAGGTAACTGCCTGTAAAGATTTGATCTTTTTGGTGCTTGCTTGCCGACACATTTGATTGAAGCGCGTAATGCAGTAGTTTGATGTTAAAATTATTTTTAGGTAATTGAATTTAGTATGTGGTAAATATAGTTGGTAAGCAACAGATCGATAAATTCTTAAGAGATCTTTAGGAGAGTTAGCTGTTGTGTGGCTATTATTGAATTGCACAGTTAATGATGTTATTCCCATGTGTATAATTTGAAGAGCTGTGTTTTTTATGGTTTGAAAATGAGCACTAAATTATCATATTTGAAGTGAAAGATTCCTTGTATGCGGTCTAGGGTTTTCCATTTTCTGAACTACGACTAGATGATAATTTACTTTATTTTGACATATATGCTTTTGCCTAGATTGAAATGATTAGGATGTATATATTTATTTGGAACCAACACATGGTCTGGAGGGATAGTGCTGCTGAGCTTGATATTGTGGAATTTTTTGGTGTACTACTATATATTTGTAAAACTGATTATGACATCTCTGATTAATTGGCACAATTAGAGCTTTGAATGATTTATCGAAGTCTTAGGAATCTGGGTGGATAGTATAGTATGAAACAAATGAGAAGTTAGTACTTCTGAGCATGTTGTTTTAGATCAGCAGAATATTGCACATCTAGGCTGGCACCTGACGTGTATGATATTATATGGAAACTAACTACGCAGAATCTTTCTTGAAGTACCAACATGATGGCATGGCTTAGATGGATGACCATAGTCTGTGCATGTACAAAGTAATTAAATCATAACACATCATAGATTGTTTCGGTGTCTGGCTGCTTTCGTTTAGGTAGGCTTGGGCTTTATAAGGAAAATTAATGGCAAGAAAATTCTGCATGATGCAGCTGGCTTGATTGTTCCTACAAATATTTACTGTAGTAGTCTACAGCTCTGGTTAATAATTAATTACTCATTATTAATTACACACTTTTCTTGGAAAATATTTCAGGAGGGTCACAAGCCCCATTGCATAATAAGCCCAAATCTAAATGTTGGAGGCGCTCTAGATCAAAAGGCCAGCAACGGGAACACTGGGATCTTGATAAACGGCCGTGAGATTACGAAATCTGAGCTGCAAATGCTTAAGGTTTGAAGCAATATACTGGTACCTAATTTTGTAATTCATGTGTTTTATCTCTAACCTTTTACATTTCAGTTGGCAGGAGTTCAATGTGCTGGAAAACCTCACTTTTGGGTGAATGCTGATGGGACTTACCAAGAGGAAGGACAAAAAACAGTTAAAGGCAAGATTTGGGATAAGGTAATTCTGGGATTCATCTTGTAGTTGCCCTGTAATTCGTCAGAGGAAACTAACCAAAGTTACATATGTTCTGCATTCCTTGGCAGCCTATTGTGAAGCTGCTTAGTCCTGTCCTATCACTGCCAATGCCTAACAAAGCAAATAATCAATGCGGTGAAGAGCCAGTGAATGTGGTAAATCGACCCATCCCTGACTACTTGGAGCAAAGGACCATTCAGAAGCTCCTGTTGGTTGGATCAGGGACAAACACCATACTCAAGCAGGTACAAATATATTGATGTGTTTATGTAGATAAGTTGATCACTGAATTAGCATCACCATCCAATTACCTTTATTTACCTTGGAGTATTAAAGGCAAGATTCACTTCACACGAACAGAAGGACTTAGTTTTATGGTTCGCTGCCTGTTGTTTGCAATATCAATATAGCAACTGATCTTGAATCCATCAAACCTTAGGCCAAGTTCTTGTACAAGAGCAGACCATTTTCTGTAGAGGAGTGTGAAGATCTCAGACTTATCATACAAAGTAACATATACAACTACCTTGGTATACTACTTGAAGGGCGTGAAAGATTTGAAGAGGAAGCTATAGCTGACAGAAGAACTACCTGCCAAAGTGATCCTTCTAGCTCTGGTATGACAGTCGTATTATTATGTTCTTTTGGCTATCCACCTTAATTCTTTGCTGCATAAATTCACATATTTATATCAGCAGGAGACTTGCAATTGTTTGATTTTAGTGAAACATATAGACTGCTAGCCTCTTCCACAGACCATCTAGAATTTATTTTTGTGTTTCTTTTGCAGGCCATTGTGAACCAGAGCTTTGTAATGACATTACTGAGTACTATATTGCTCCACGCCTGAAAGCATTCTCTGATTGGATTCTAAAAGCTATGGCCATAGGTAATCTTGAAGACATTTTCCCTGCAGCTAGTCGTGAATATGCACCAATGGTTGAGGAACTATGGAAAGATCCTGCTATTCAAGCTACATATAACCGGAGAAGTGAACTGCCATTCCTTCCATCTGCTGCTAGTTATTTCCTTGACAAGGTACTATTGTTGTTCCATTGTTGTTTGAACACTTGACCTCGGTTGATGCACTGTTTCTACATCTGTTTCATGTCAGATGGCAGTGTCTAAGTAGTGCTGAGTCATATAATTACAATTGCTCATTCTTTAACATTGTTATTTGGGATGATCAGGCTGTTGATATTTCCCGAACGGAATATGAGCTCTCTGATATGGATATCCTTTACGCTGATGGGATAACATCCTCAGATGGGTTAGCATCTACAGATTTCTCCTTCCCACAACTGGCTTTGGACGGGCGGGGTTTTGATGAGCCAGATCCACAAGACACTTTGCTAAGGTCTGTTCTTAAGTCACTGAAAAGGGCATGGTAGTCTAAATAACCTGTGTTTCTAGTCTTTCTGTAACTTTCATCTTTGTTAATGATAACAGTATGAACAATGAAACATTTTGTTCTATTTTCAGGTACCAACTAATAAGAATAAACAACAAAGGATTGCATGAGAACTGTAAATGGCTGCAAATGTTCGATGATGTGAGGCTTGTTATCTTCTGTGTTGCGGTCAGCGACTATGATGAGTACTACGAGGATGCAAACGGCAATGTTGTGAACAAGATGATGGAGACCAGGCAGCTATTTGAGAGCATTGCCCTTCATCCGATATTTGAGCAGATGGATTTCCTTCTACTTCTCACCAAGTTTGATATCCTAGAGCAGAAGATCGGCAAATCTCCTTTAACATCATGCGACTGGTTCAGCGACTTCACTCCCCTGGTAAGCCGCAATCTGATCAACGGCACCAGCAAAAGCTCGCGGGGCAGCTCCACTGGCTCGACATTGGCGCAGATGGCGGGTCACTACATTGCGGTGAAGTTCAAGAGCGTATTCCAGTCGTTCACGGAGCGGAAACTCTACGTGTCCTACGTGAACGCCCTGGACCAGGAGTCGGTCCGCTCCGCGATCCGCTATGGAAGGGAGATCATCAAGTGGGAAGACGAGAAGCCCGTGTTTGGGTCCAGCGAGACGACATACAGCGAGGAGCCGAGCTCCTACTCTCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035907

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA035907&oldid=52212"