BGIOSGA035927

From RiceWiki
Revision as of 08:12, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035927| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035927, complete gene.| tag = OsI_389...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA035927

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035927, complete gene.

LocusTag

OsI_38910

Ensembl Transcript ID

BGIOSGA035927-TA

Ensembl Protein ID

BGIOSGA035927-PA

Length

406

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19833943..19834348

Sequence Coding Region

19834244..19834348,19833943..19834176

Genome Context

<gbrowseImage1> name=IndicaChromosome12:19833943..19834348 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:19833943..19834348 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGCAGCGCTGTCATCGGCATGGCAGGATCTCCCCACCGACCTGCTGGTCCTCGTGCTGCTCCGCTTCCCGTCCCTCGCCGACCGGGCCCGCCTCCGCACGGGAGACGCCATTTCTGTCTCCCATTGCAATCAACAGAAAGGAATCGGCGTCATCAGCTCATTTACAGACAGGAAAAAGAACTCAACCATGGATGTATCTGATATCGCCTTCTTCCGAGGGAAGCTATACACTCTCAGTAGAGAGCAGAAGGGCTTGCTTGATGTTCTTGAGCTCTCGATGACGAAAAAAATGTCATCATCAAGATGTTATCAGTATTCAGTGCATCATCCATGA</cdnaseq>

Protein Sequence

<aaseq>MVAALSSAWQDLPTDLLVLVLLRFPSLADRARLRTGDAISVSHCNQQKGIGVISSFTDRKKNSTMDVSDIAFFRGKLYTLSREQKGLLDVLELSMTKKMSSSRCYQYSVHHP</aaseq>

Gene Sequence

<dnaseqindica>1..105#173..406#ATGGTGGCAGCGCTGTCATCGGCATGGCAGGATCTCCCCACCGACCTGCTGGTCCTCGTGCTGCTCCGCTTCCCGTCCCTCGCCGACCGGGCCCGCCTCCGCACGGTGTGCCGTTCCTAGCGTGCCGGCGGCCACCCGCTGCTTCCCATCTTAAGCTGCCATCATATTGCAGGGAGACGCCATTTCTGTCTCCCATTGCAATCAACAGAAAGGAATCGGCGTCATCAGCTCATTTACAGACAGGAAAAAGAACTCAACCATGGATGTATCTGATATCGCCTTCTTCCGAGGGAAGCTATACACTCTCAGTAGAGAGCAGAAGGGCTTGCTTGATGTTCTTGAGCTCTCGATGACGAAAAAAATGTCATCATCAAGATGTTATCAGTATTCAGTGCATCATCCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035927