BGIOSGA035928

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Revision as of 08:12, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035928| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035928, complete gene.| tag = OsI_389...")
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Gene Name

BGIOSGA035928

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035928, complete gene.

LocusTag

OsI_38907

Ensembl Transcript ID

BGIOSGA035928-TA

Ensembl Protein ID

BGIOSGA035928-PA

Length

5897

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19803342..19809238

Sequence Coding Region

19808445..19809238,19804298..19805405,19803342..19804205

Genome Context

<gbrowseImage1> name=IndicaChromosome12:19803342..19809238 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:19803342..19809238 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACTTCAGTTGTGCGCCTCGCATTATCTGTGGTAAACGAGGTCTGCCTTGTCTTGGAGAAAGATGCGGAGCGCCGTGGGAAACTCCACGTTGGCCTCCGATACATCATGGACGAGATGGAAATGGCTAAAACCATGATAAAGGAGGAGTGCCGTGGAGCTGAGCAGGAGTTAAGGATTCGGCGTCTACAGGAGTTCGCTTACGATGTTGAAGATTTCGTGGAAGGTCTTCGGGATCCAGGGGCATATGGCAAAGTCCTCGTGGCTATCGGGGCGGACCGCCGTCTGGAACTGCTTACAGAAATCGAACAGTTCAAGCAGACAATCGCTTCTTTAACAAAGGATTGGAAACATTGCCCTGAATCCAGCAATAATATGAACAGACATACAGAAGACAATGCTATATCTGCCCCGAATGAAGATGAAGAGGAAGAGAAAGAGGAAGAGGAAGAGGATGATCTTGTGGACATCGACCGTCCCAAGGGGAAAATTGTTGAGCTGCTCTCGCCGTCGCAAGGCGAGGAGCAACAGCTGCGGGTGATCTCCATCGTGGGTTGCCGCGGCGTGGGGAAGACTGCCCTCGCAAGAGCAGTCTACAGGGATTATTCTGCCTCCGAAGAATTTGACTGTGTTGCTTGGGTTCTGGCATCGAGATGCAACAACAAAAGGGCCCTTGTAGACAAGATTTTCCAAAGTGTTCGGAAGGCCCTTAGAAGCAAGCAGACGGAAAATGTTCCGGCGGAAGCTGAACGTGATTTCGCCATGAGTCTTAAGGACATTTTGTCCAAAAAGAGGTGCTTGGTCTTTATCGACGACGTGCAACAAGCACGAGTATGGAAAGATACAGTACGAGTACTAGGTGGTTACCCAAAAAAAGGCAGCAAAAGCAGAATAATTGTGACGACAAGTATTCGTTCCGTCGCAACAGCCTGCAGCTCTGGCAGCTATGTTTACAATATGCAATGTCTTAAAGATGGTTACCAAAAACGTTTGTTCTGGAGAAAGGTTTATGGCAATCAAATGCCACCTCCATCTTCCCTGGCAGATGATCCAGAAACAAAAATCTTCTTCGAAATATGCGGTGGTTTACCACTGGTACTGATTTGTGCAGCTAAACATTTAAATATGAACGGAATGGATCTGAAAAGTCGTCACTGTAAAGAGTTACGACGAAAACTTGGAAGATACCTGTCAGACGATAATGCCCCGAGGGACTTTAAGGAAATGAGAAGGGCGCTTATGCAATGCTACGATAACCTGCCTGACCATGACCTCAGGTCCTTCTTGCTTTACCTGAGTATATTCCCCAGGGGCCATCAGATAAAGAGCAAGAGCTTAGTCAGAAGATTAAAAGCTGAAGGGCTAATTGTCGACGACGAAGAGCCTACTGAATGTTTTGACGAGTTGATTGACAGGTGTATCATTGAGCCAGTGCGGACATGGGACAATTTGGTAGCTGTCAAGAGGGGTCAAATTCATGGTGTTGTGCTGGAGTATATCAGTCAAAAGATAAAAAACAAAAATGTGGTCACTCTGGTTGAAGGGCCAGAAGTGCCTATAGGAAGCCATGAGTCCTCTATCCGCCGACTCTCTATTCAGTACAGCATCAATGTAGGATTTATTGATCTTCAAATCAGACCTAAATTAAGGTCGTTAACCATGTTCGTCAAGAACGAGCTTTCTAATTTACAGAAATGCAAGATGATGCGACTCCTTGATCTTGAAGGTTGCACTGGCCGGCTTGAGAGTGGATTTCTTAAAGACATATGTGAATTACCGCTTCTCAAGTATCTCAGCCTCAGGGGGACTGGCATTAAAAATATTCCCACACAGATAGAGAATCTAAAACGTTTGGAGACGCTCGACGTACGAGAGACAGAGGTGAAAAATTTGCCCATGCAGAAAAAAAGTTCATTGCACACTCTTTCTGGATTTATTGCAAACGAGACACAATGTCTGGCCCATGCTATACTACTTTTCGCAACAAACCTGAAGAAAGTTAAAGTATGGTGCAGTGCCTCAAGTCGTTCACGACAGAAAAGAAAGTCGGTGTGGGTCAGCCTCCCTTCGAGCTCTGCAAATCAAATGCAAGGTAACCATCCTTGCTTGACAACTGAAGAAGGTAGTCGAAGTGTCAATTTAGAGCTTGCCACGCTTCTTACAAGGCCCTCCGAGTGTCTAGAGTCTGTTTCCATTGTTTCTTCTTCCGGACTTTGCAAACACTTCTGGGCCTCTCTAGAGGGTCGTCCATGCACCATCAGTTCTATCAAACTGCAGGGAAATTTGGGCAGTCTGCCTGATTCTAAAAAGTTAAGTGATCTTGGTAGAATTAAGAAGCTGCATCTCTACTCAACTGGTCTCACCATCGAAGAGTTGTCTGCCTTGCAATATTTACGTGGCTTGGAATATCTGAAGCTGGTAGAGTTAGAGCATAATTCTAGATTTTGCAACGGCACTTTCGTCGTGGAGAAAAACGGATTCGAAAGCCTTAAGAGTCTGTGCATCAAAGCCCCACATGTTCCAAAATTACAATTCAAAGAAGGGGCTATGAAAAGTCTAACCTCCATTCACCTTCTTTGTCCAAATTCTCAGAAGCTACTGCTGCTGCCATCAGAAACCATTGTGGGCATCTCAAATCTTACATATCTCAGTGAGCTGATAATCCACAGTTCACTTCCGCAAGATTGGGAAAGAGTAGCAGATGGGCACCCTAACCGGCCGTGTGTGAAGAGGGAACCAGAACAAACAGCCAACACAGCAACATAA</cdnaseq>

Protein Sequence

<aaseq>MTSVVRLALSVVNEVCLVLEKDAERRGKLHVGLRYIMDEMEMAKTMIKEECRGAEQELRIRRLQEFAYDVEDFVEGLRDPGAYGKVLVAIGADRRLELLTEIEQFKQTIASLTKDWKHCPESSNNMNRHTEDNAISAPNEDEEEEKEEEEEDDLVDIDRPKGKIVELLSPSQGEEQQLRVISIVGCRGVGKTALARAVYRDYSASEEFDCVAWVLASRCNNKRALVDKIFQSVRKALRSKQTENVPAEAERDFAMSLKDILSKKRCLVFIDDVQQARVWKDTVRVLGGYPKKGSKSRIIVTTSIRSVATACSSGSYVYNMQCLKDGYQKRLFWRKVYGNQMPPPSSLADDPETKIFFEICGGLPLVLICAAKHLNMNGMDLKSRHCKELRRKLGRYLSDDNAPRDFKEMRRALMQCYDNLPDHDLRSFLLYLSIFPRGHQIKSKSLVRRLKAEGLIVDDEEPTECFDELIDRCIIEPVRTWDNLVAVKRGQIHGVVLEYISQKIKNKNVVTLVEGPEVPIGSHESSIRRLSIQYSINVGFIDLQIRPKLRSLTMFVKNELSNLQKCKMMRLLDLEGCTGRLESGFLKDICELPLLKYLSLRGTGIKNIPTQIENLKRLETLDVRETEVKNLPMQKKSSLHTLSGFIANETQCLAHAILLFATNLKKVKVWCSASSRSRQKRKSVWVSLPSSSANQMQGNHPCLTTEEGSRSVNLELATLLTRPSECLESVSIVSSSGLCKHFWASLEGRPCTISSIKLQGNLGSLPDSKKLSDLGRIKKLHLYSTGLTIEELSALQYLRGLEYLKLVELEHNSRFCNGTFVVEKNGFESLKSLCIKAPHVPKLQFKEGAMKSLTSIHLLCPNSQKLLLLPSETIVGISNLTYLSELIIHSSLPQDWERVADGHPNRPCVKREPEQTANTAT</aaseq>

Gene Sequence

<dnaseqindica>1..794#3834..4941#5034..5897#ATGACTTCAGTTGTGCGCCTCGCATTATCTGTGGTAAACGAGGTCTGCCTTGTCTTGGAGAAAGATGCGGAGCGCCGTGGGAAACTCCACGTTGGCCTCCGATACATCATGGACGAGATGGAAATGGCTAAAACCATGATAAAGGAGGAGTGCCGTGGAGCTGAGCAGGAGTTAAGGATTCGGCGTCTACAGGAGTTCGCTTACGATGTTGAAGATTTCGTGGAAGGTCTTCGGGATCCAGGGGCATATGGCAAAGTCCTCGTGGCTATCGGGGCGGACCGCCGTCTGGAACTGCTTACAGAAATCGAACAGTTCAAGCAGACAATCGCTTCTTTAACAAAGGATTGGAAACATTGCCCTGAATCCAGCAATAATATGAACAGACATACAGAAGACAATGCTATATCTGCCCCGAATGAAGATGAAGAGGAAGAGAAAGAGGAAGAGGAAGAGGATGATCTTGTGGACATCGACCGTCCCAAGGGGAAAATTGTTGAGCTGCTCTCGCCGTCGCAAGGCGAGGAGCAACAGCTGCGGGTGATCTCCATCGTGGGTTGCCGCGGCGTGGGGAAGACTGCCCTCGCAAGAGCAGTCTACAGGGATTATTCTGCCTCCGAAGAATTTGACTGTGTTGCTTGGGTTCTGGCATCGAGATGCAACAACAAAAGGGCCCTTGTAGACAAGATTTTCCAAAGTGTTCGGAAGGCCCTTAGAAGCAAGCAGACGGAAAATGTTCCGGCGGAAGCTGAACGTGATTTCGCCATGAGTCTTAAGGACATTTTGTCCAAAAAGAGGTCCGTCTTCCATCCTGTCCATTTTCCAGTTTTGGCTACTCTCCTTTTTTTCTGTATTTCAAATATTCAAGGTATTCTCAGAAAATTGGAGTATTTTGGTTCAAAGACTATATTTTTTTTGGACAAAATGATCAGCTTAAAAAGAGCATAATCTTGTTTAATTTGCAAGTCTAAATTTCGGATTCCACTACAGTACTCTCTATTGACCAATAGAAACAAATCATACAATATACTCTCTACTGACCAGTAGAACTAAATCATACAATACTCTACTGACGAGTAGAAATAAATCTGGTCCGAATCTAATTGTACTACCACCTAAATTAATGGCAGAAGAAACATGGAAGGGTAAAATCGTTCATAGAGATATAGGCGTTGAGATTAGAGTTGTAATTTTGCACATAACTTAGGCCCTGTTTAGTTTGCAAAAAGAAAATTTTTAGGTGTCACATCGAATGTTTGACCGGATGTCGAAAGGGGTTTTCGAACACGAATGAAAAAACTAAATTTCATAACTCGCCTGGAAACCGCGAGACGAATCTTTTGAGCCTAATTAAGCCGTCATTAGCAGTTTAGCACATGTAGGTTATTGTAGCACTTATGACTAATTATGGACTGATTAGGCTCAAAAGTTTTTTCTCGTGATTTCCATATAAACTGTGCAATTAATTTTTGTTTTTATCTATATTTAATGTTCTATACATGTGTCCAAGGATTTGATGTGATGTTTTTGAGAAAAGAATTTTGGAAACTAAACCAGGCCTTAGAAACCACACAAATTTTTGCCCACCCTGACCGCCCGCCCCGGCTTTCGATCTGATTTTCTTTTTCACCGCACCTGTAACTGGGACGGGCATACTCGATCCTCACGGTCGGACGAGTCGAAGTACAGTGCTAGCATATGGTCGTCATTGCCGTCGCAGGCGGCTGATCTATCGACACTTAGTGGAGAAACACAGCAACGGTAGCGAACAATTTGTGGCCTCAGCGTGGACGGCCTCTTCGATGGTGGGCACGAGCAGTTGTGGCGACGACGGGATGAATTAATGAATCATGAAGGATAGCAGGGATTGGTTCGCAAGTTCTCTCTAGGATGATCCAACCGGAGTAAATCAAAAATAATATAACATGTAGAATAATGAAAAAATGCCACACGCAAAATATTAAAAAAAACATACTAGTCAGTATGCATATTATGTTTTAAATAAACATTTTTAGACTTCGACACAATCTTCGAGATGCCACTTTGATCAACAATATATATAAAAGTAATATGTTTTAAATAAAAAGTTTTGCATATTATGGTAGTTTGTTTAATAATGAATCTAGTAAGATCAATTTTACATGATTGATCTTTTTTGTTTTTCGTTATTAATAGTCAAAGTTATAAAGATTTGACTTGGCACTATTCTAAAAATGTTTGTATATATATTTTGGGACGGAGAGAGTAGTTAAGAGGACCATAGAGAGAAATAGCTAATGGACGATCAGCCACGGGTCGGTTCACCGGCACGATTAGTTTGGCCCATATGATTTTTTCCATCTCTTCTATTTTTAGACTTCTTCTAATATCGGGCTAGCCCAATTCGTGTTTACATAGGACTAATTGGGCCTCTTTTCTATTCTAGCATGGTTTTTTTCTTTTAGCCCACACGTATAAACTTGATATATATGTATAAATTTTATATATGTACAAAAACTTTAACTTATATATATATATATATATATATATATATATAGTCAGAGAAAAAATATATAATTTTATATAAGTATGTATTATATATATATTGACACACATAGTGATGCTAAAATTCACCCTGGATGCGTAATAACCAAAACGTGTCCCTCATATAGTAAAAATTTTACTATGCGTTATATGTTCTCAGATCCCTAATAGTAAAAACTTTATTGTTAGGCTTAATATGGAGATTTGTGATGATTGCACTCTCAGTAAAATATTTATTAACATTAGGTGTGTTTTGAACTATTACGCACCTTGAGTGCAATATAATAGGTATATATGGATGCACTAAAACAAAGCCCTATATATACAAAACATGTAGTTAAACTTTTAGAGAGCAATGTTTCTCACGTCATATCTTTTTTCTAATTCGTTTGCACCATAATATTAAAAAAAGGTGCATAATAAAACTAAATCCGTCATTGCTATATTTTAAAGATGTTACAAATTGGTCATCGTGTTATTATGTCGTTTCTGCGTGACTAAAACTAGAATGAGGTGGACGTGAGTGGAAGTCAGGTGACGGGTTTTACCGAGATCGGACCAGCGGGAAAAGGTTTTGACCGGCCTTCCAATCCTTTATCCTCACCGGTTTTCCAGGAGGCTGCACGAACACAAACAAGTGATGAGGAACAAAGCGTTTGTTTTTTCAAGACCGATATTGCCCCTCGACGATTGATGGCCAGATTTTGTTAGTACCTCATGGTGCCTAATATCTAGTGATAACTTTGCAAGTCTTGTATAAATCCTCGAAATACATATAAGGAATACCCCTTTGGAACCAACTAGGTCCAAACTTTTTCCGATTTCCACGGTATGGAGGTCAACGATATATAGTATTCAAGTTGGAGTGCCAAAATAAGACTGAGCTATTTCTGTGGTAAAAAATTAGAGTTTGATCATGATTTACACTTTAGATGATTATTTAGCACGGTTTTAAATCTCCTGCTATAGCTGCCGCTATCTCCCGCTATAGCTGTTTTAGAAAGGTTCTAGCTATTTGCTCTCATATACAATTTAGCCGCTATATCTCCATTTAGCCCGCTATAGCAGTTTGACAAGCTAACCGCTAAATGTTTTAGCCCGCTATTTAAAACATTGCTATTTAGCAAGTTAGCATTGACACTTGAGTGATTAATTTCTATCCTATCTAACATTAGCCTGGAACAAATTGGAAAGGTAACTGTATCTGAGGTAGTGAGGCCTTGAACAGTCAAATTTTGTGTGATCAAACACCACAAGTTGTGTATATATCTGAATCATTTATTGAAATTATGTTATTCAATTTGATTTGCTAGGTGCTTGGTCTTTATCGACGACGTGCAACAAGCACGAGTATGGAAAGATACAGTACGAGTACTAGGTGGTTACCCAAAAAAAGGCAGCAAAAGCAGAATAATTGTGACGACAAGTATTCGTTCCGTCGCAACAGCCTGCAGCTCTGGCAGCTATGTTTACAATATGCAATGTCTTAAAGATGGTTACCAAAAACGTTTGTTCTGGAGAAAGGTTTATGGCAATCAAATGCCACCTCCATCTTCCCTGGCAGATGATCCAGAAACAAAAATCTTCTTCGAAATATGCGGTGGTTTACCACTGGTACTGATTTGTGCAGCTAAACATTTAAATATGAACGGAATGGATCTGAAAAGTCGTCACTGTAAAGAGTTACGACGAAAACTTGGAAGATACCTGTCAGACGATAATGCCCCGAGGGACTTTAAGGAAATGAGAAGGGCGCTTATGCAATGCTACGATAACCTGCCTGACCATGACCTCAGGTCCTTCTTGCTTTACCTGAGTATATTCCCCAGGGGCCATCAGATAAAGAGCAAGAGCTTAGTCAGAAGATTAAAAGCTGAAGGGCTAATTGTCGACGACGAAGAGCCTACTGAATGTTTTGACGAGTTGATTGACAGGTGTATCATTGAGCCAGTGCGGACATGGGACAATTTGGTAGCTGTCAAGAGGGGTCAAATTCATGGTGTTGTGCTGGAGTATATCAGTCAAAAGATAAAAAACAAAAATGTGGTCACTCTGGTTGAAGGGCCAGAAGTGCCTATAGGAAGCCATGAGTCCTCTATCCGCCGACTCTCTATTCAGTACAGCATCAATGTAGGATTTATTGATCTTCAAATCAGACCTAAATTAAGGTCGTTAACCATGTTCGTCAAGAACGAGCTTTCTAATTTACAGAAATGCAAGATGATGCGACTCCTTGATCTTGAAGGTTGCACTGGCCGGCTTGAGAGTGGATTTCTTAAAGACATATGTGAATTACCGCTTCTCAAGTATCTCAGCCTCAGGGGGACTGGCATTAAAAATATTCCCACACAGATAGAGAATCTAAAACGTTTGGAGACGCTCGACGTACGAGAGACAGAGGTGAAAAATTTGCCCATGCAGGTCATCATGTTGCCAAAACTAGCTTACCTGTTTGGAAAGTTTCAGCTACCAGAAGTAGGAAAAGTAAGAAACACCTTCGTGAATTCCTGCAGAAAAAAAGTTCATTGCACACTCTTTCTGGATTTATTGCAAACGAGACACAATGTCTGGCCCATGCTATACTACTTTTCGCAACAAACCTGAAGAAAGTTAAAGTATGGTGCAGTGCCTCAAGTCGTTCACGACAGAAAAGAAAGTCGGTGTGGGTCAGCCTCCCTTCGAGCTCTGCAAATCAAATGCAAGGTAACCATCCTTGCTTGACAACTGAAGAAGGTAGTCGAAGTGTCAATTTAGAGCTTGCCACGCTTCTTACAAGGCCCTCCGAGTGTCTAGAGTCTGTTTCCATTGTTTCTTCTTCCGGACTTTGCAAACACTTCTGGGCCTCTCTAGAGGGTCGTCCATGCACCATCAGTTCTATCAAACTGCAGGGAAATTTGGGCAGTCTGCCTGATTCTAAAAAGTTAAGTGATCTTGGTAGAATTAAGAAGCTGCATCTCTACTCAACTGGTCTCACCATCGAAGAGTTGTCTGCCTTGCAATATTTACGTGGCTTGGAATATCTGAAGCTGGTAGAGTTAGAGCATAATTCTAGATTTTGCAACGGCACTTTCGTCGTGGAGAAAAACGGATTCGAAAGCCTTAAGAGTCTGTGCATCAAAGCCCCACATGTTCCAAAATTACAATTCAAAGAAGGGGCTATGAAAAGTCTAACCTCCATTCACCTTCTTTGTCCAAATTCTCAGAAGCTACTGCTGCTGCCATCAGAAACCATTGTGGGCATCTCAAATCTTACATATCTCAGTGAGCTGATAATCCACAGTTCACTTCCGCAAGATTGGGAAAGAGTAGCAGATGGGCACCCTAACCGGCCGTGTGTGAAGAGGGAACCAGAACAAACAGCCAACACAGCAACATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035928