BGIOSGA035939

From RiceWiki
Revision as of 08:13, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035939| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035939, complete gene.| tag = OS12G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA035939

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035939, complete gene.

LocusTag

OS12G0581300

Ensembl Transcript ID

BGIOSGA035939-TA

Ensembl Protein ID

BGIOSGA035939-PA

Length

1930

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19627333..19629262

Sequence Coding Region

19628822..19629262,19628086..19628433,19627333..19627959

Genome Context

<gbrowseImage1> name=IndicaChromosome12:19627333..19629262 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:19627333..19629262 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACAAGAAGCAGGGCTTCTTCTCCGCGCTCCGGGAGGAGGTCGCCCGCGGCCTCTCGCCGGCGCGCGCTCGCCGCCGGTCGCAGGCGGCCGCCGCGGCAGAGGTGGCCGCGGCGCTGCGGTACGCGGGTGGTGGTGGTGGGGGGGAGATGCTGGCGCCGCTCATGGAGGGCCCGGATCCGGAGTCGGGAGACGGCGGGAGATCGTCGTCGTCGGCGGCGGCGGCGAGGAGGGAAGGGTGGGGGCGGTGGGTGCGCGGCCAGCTGTCGCGCGCGCCGTCGACGGCCGGCGCGGCGGTGGTCGCGGCGGGTGGTGGCGGCGGCGCGGCGAGGCGGAACGACCTGAGGCTGCTGCTCGGCGTCATGGGCGCGCCGCTCGCGCCGGTGCACGTCGCCGCCGGCGAGCCGCTCCCCCACCTCAGCATCAAGGACACCCCCATTGAGACCTCGTCGGCGCAGTACATTCTGCAGCAGTATCTGGCTGCCTCCGGGGGGCAGAAGCTGCTGTCATCGGTGAGGAACTCGTACGCCATGGGCAAGGTGAGGATGGTGGCGACGGAGTTCGAGACCGGCGGCCGCGTGGTGAGGAACCGCATGGCGGCGCGCGCCACGGAGTCCGGCCGGTTCGTGCTGTGGCAGATGGCCCCGGAGATGTGGTACATTGAGCTCGCCGTCGGCGGGAGCAAGGTGCACGCCGGCTGCAATGGCAAGCTCGTGTGGCGCCACACGCCATGGCTCGGCGCGCATTCCGCCAAGGGCCCCGTCCGCCCTCTCCGCCGCGCACTCCAGGGCTTGGATCCTCTGACCGCGGCGAGCATGTTTGCCGGTGCGCGGTGCATTGGCGAGAGGAAGGTGAATGGGGAGGATTGCTTCATCCTGAAGCTGTGCGCGGACCCTGAGACGCTAAGGGCGCGCAGCGAGGGGCTTGCAGAGATCATCCGGCATGTTCTCTTTGGGTATTTCAGCCAGAAGACTGGCCTCCTTGTGCATCTTGAGGATTCTCACCTCACCAGGATTCAGTCCACCACCGGAGGGGACGCAGTTTACTGGGAGACCACCATCAATTCGTTCATTGAGGACTACCGCCCGGTGGAGGGTATAATGGTTGCGCACGCTGGTCGCTCCGCTGTGACCCTCTTCCGTTTCGGAGAGGTTGCCATGAGCCACACCAAGACTCGCATGGAGGAGGCATGGAGCATCGAGGAGGTCGCGTTCAATGTCCCTGGCCTCTCCATCGATTGCTTCATCCCGCCCACCGACATCAAGTCTGGATCCATCAGCGAGACCGTCGAGCTTCCTCATGGCGAGAAGAGCAAGGTTGGTCTTCTCCAATGCCATAGTGCTAAGGTGGCCGCGTTGGAGAAGGCAGACGACAACGTCGCGTGGAGCGGAGCACTGCAGCGAGATTTCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MDKKQGFFSALREEVARGLSPARARRRSQAAAAAEVAAALRYAGGGGGGEMLAPLMEGPDPESGDGGRSSSSAAAARREGWGRWVRGQLSRAPSTAGAAVVAAGGGGGAARRNDLRLLLGVMGAPLAPVHVAAGEPLPHLSIKDTPIETSSAQYILQQYLAASGGQKLLSSVRNSYAMGKVRMVATEFETGGRVVRNRMAARATESGRFVLWQMAPEMWYIELAVGGSKVHAGCNGKLVWRHTPWLGAHSAKGPVRPLRRALQGLDPLTAASMFAGARCIGERKVNGEDCFILKLCADPETLRARSEGLAEIIRHVLFGYFSQKTGLLVHLEDSHLTRIQSTTGGDAVYWETTINSFIEDYRPVEGIMVAHAGRSAVTLFRFGEVAMSHTKTRMEEAWSIEEVAFNVPGLSIDCFIPPTDIKSGSISETVELPHGEKSKVGLLQCHSAKVAALEKADDNVAWSGALQRDFK</aaseq>

Gene Sequence

<dnaseqindica>1..441#830..1177#1304..1930#ATGGACAAGAAGCAGGGCTTCTTCTCCGCGCTCCGGGAGGAGGTCGCCCGCGGCCTCTCGCCGGCGCGCGCTCGCCGCCGGTCGCAGGCGGCCGCCGCGGCAGAGGTGGCCGCGGCGCTGCGGTACGCGGGTGGTGGTGGTGGGGGGGAGATGCTGGCGCCGCTCATGGAGGGCCCGGATCCGGAGTCGGGAGACGGCGGGAGATCGTCGTCGTCGGCGGCGGCGGCGAGGAGGGAAGGGTGGGGGCGGTGGGTGCGCGGCCAGCTGTCGCGCGCGCCGTCGACGGCCGGCGCGGCGGTGGTCGCGGCGGGTGGTGGCGGCGGCGCGGCGAGGCGGAACGACCTGAGGCTGCTGCTCGGCGTCATGGGCGCGCCGCTCGCGCCGGTGCACGTCGCCGCCGGCGAGCCGCTCCCCCACCTCAGCATCAAGGACACCCCCATTGTAAGTGCTCTTGGGTGAAATCCTCTCGAGTGAAAATTTCGGTGATTTTTTTTTGTGGATTTTGAGTTCTTGGATTAATTAATTTCTAAAGTCGCCACCTATTCAATTATTTCTTCTTCTAGAAAAACCTGCTGGTTCGTTAGGAAGAAACAATATGAAAAAAAAAAGAAAAAGAAAGAAGAAGAACTGGTTCTTGATGTGATGTTTGGATGTGATACATTTTCTCATATCCACTGTACAAACGGTTTATTCCTCATGTAGTGTTCTACCATTTCACTTTCAGTTACCCATTTACTGAAAGAAAAAAGAAATCAGCAACTCTTTGATGTAGTTGTAAAAAGTATTTTGTTGTAGCTGTAAGTTTTACCATTACGATGTGTTCTTGCAGGAGACCTCGTCGGCGCAGTACATTCTGCAGCAGTATCTGGCTGCCTCCGGGGGGCAGAAGCTGCTGTCATCGGTGAGGAACTCGTACGCCATGGGCAAGGTGAGGATGGTGGCGACGGAGTTCGAGACCGGCGGCCGCGTGGTGAGGAACCGCATGGCGGCGCGCGCCACGGAGTCCGGCCGGTTCGTGCTGTGGCAGATGGCCCCGGAGATGTGGTACATTGAGCTCGCCGTCGGCGGGAGCAAGGTGCACGCCGGCTGCAATGGCAAGCTCGTGTGGCGCCACACGCCATGGCTCGGCGCGCATTCCGCCAAGGGCCCCGTCCGCCCTCTCCGCCGCGCACTCCAGGTAGCACACCGGGGAGCCTGCCATGTCTTGTAGTTTGATGTCGTCTGAAATGTGCCATTGTGTGTATATGGTGGAAGAAGGTGGTAGTCTGACTGAAATTGTTGTTGGTTCATATTGTATCTTCAGGGCTTGGATCCTCTGACCGCGGCGAGCATGTTTGCCGGTGCGCGGTGCATTGGCGAGAGGAAGGTGAATGGGGAGGATTGCTTCATCCTGAAGCTGTGCGCGGACCCTGAGACGCTAAGGGCGCGCAGCGAGGGGCTTGCAGAGATCATCCGGCATGTTCTCTTTGGGTATTTCAGCCAGAAGACTGGCCTCCTTGTGCATCTTGAGGATTCTCACCTCACCAGGATTCAGTCCACCACCGGAGGGGACGCAGTTTACTGGGAGACCACCATCAATTCGTTCATTGAGGACTACCGCCCGGTGGAGGGTATAATGGTTGCGCACGCTGGTCGCTCCGCTGTGACCCTCTTCCGTTTCGGAGAGGTTGCCATGAGCCACACCAAGACTCGCATGGAGGAGGCATGGAGCATCGAGGAGGTCGCGTTCAATGTCCCTGGCCTCTCCATCGATTGCTTCATCCCGCCCACCGACATCAAGTCTGGATCCATCAGCGAGACCGTCGAGCTTCCTCATGGCGAGAAGAGCAAGGTTGGTCTTCTCCAATGCCATAGTGCTAAGGTGGCCGCGTTGGAGAAGGCAGACGACAACGTCGCGTGGAGCGGAGCACTGCAGCGAGATTTCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035939