BGIOSGA035949

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Revision as of 08:13, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035949| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035949, complete gene.| tag = OS12G05...")
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Gene Name

BGIOSGA035949

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035949, complete gene.

LocusTag

OS12G0578500

Ensembl Transcript ID

BGIOSGA035949-TA

Ensembl Protein ID

BGIOSGA035949-PA

Length

2726

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19459328..19462053

Sequence Coding Region

19462051..19462053,19461805..19461960,19460689..19461276,19460000..19460302,19459328..19459618

Genome Context

<gbrowseImage1> name=IndicaChromosome12:19459328..19462053 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:19459328..19462053 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGGTCATGAGGGATTTGTATAGGATGCTTGACGAAATAAATTCTGAAGAAGTACCTGTTGATTTGAAGGTCCCAGACTCTTTTGATGAATTCATCTGGGACATGAAGAATAATGATTATGATTTAAGGTCATTTGCTTTTAGGCTGAAGGCAACAATGGAGAGCATGGACAGGGAATTGAGAACATCAAGGTTATCAGAGCAGTTAAACAAACACTACGCAGCAATTGCTATTCCCAAAGGCCTTCATTGCCTTTCCTTGCGTCTAACTGATGAATACTCATCCAATGCTCTTGCAAGGAAACAACTCCCTCCACCTGAGTTGATCCCTCGTCTTTCTGACAATTCCTATCTCCATTTTGTTTTAGCATCAGATAACATCCTTGCAGCCTCAGTTGTGGTCAGTTCAACAATTAGGTCATCATTAAAACCTGGCAGGATAGTTTTCCATGTCATCACTGACAAGAAGACCTATCCTGCTATGCACTCATGGTTTGCTTTGAATACCCTTTCTCCTGCCATTGTTGAGGTGAAAGGTGTTCACCAATTTGATTGGTTAACAAGAGAAAACGTGCCAGTTCTTGAAGCTATAGAAACTCAGCACACTGTCAGAAGTCGTTTCCATGGAAATCACCTTGCAAGAAATAGTAGAGGTGACAGCCCAAGGGTTTTTGCTGCCAAGCTGCAGGCAGGGAGTCCAACATATACTTCGGTGCTCAATCATATTCGAATATACTTGCCTGAGTTGTTCCCAAACCTCAACAAAGTTGTATTTCTTGATGATGACGTTGTTGTCCAGCGGGACTTGTCATCACTTTGGGATATTGATCTAGGTGGGAAGGTAAATGGAGCTGTTGAGACCTGCAGAGGTGGAGATACTTGGGTGATGTCCAAGAAGTTCAGAAATTATTTCAATTTCTCCCATCCCCTCATTGCCAATAACTTCGACCCTTCAGAGTGTGCATGGGCGTACGGCATGAATATATTTGACCTGAGTGCATGGAGAAAGACATCCATTAAAGATAAATACCACCATTGGGTCAGGGAGAATCTGAACTCAAACTTCACACTTTGGAGGCTTGGAACATTACCACCTGGCCTTATAGCATTTAGAGGTCATGTTCATCCTATTGATCCATCATGGCATCTTTTAGGCTTGGGGTATCAGGAAAAGACAGATATCCCCAGTGTTCAGAAAGCAGCAGTCATACATTACAATGGGCAAAGTAAACCATGGCTGGATATTGGTTTTAAGCATCTCCAGCCATTTTGGACAAGACATGTGAACTACTCGAATGAGTTCATAAGAAACTGTCATATAATGGAGCCCCAGTTATAG</cdnaseq>

Protein Sequence

<aaseq>MRVMRDLYRMLDEINSEEVPVDLKVPDSFDEFIWDMKNNDYDLRSFAFRLKATMESMDRELRTSRLSEQLNKHYAAIAIPKGLHCLSLRLTDEYSSNALARKQLPPPELIPRLSDNSYLHFVLASDNILAASVVVSSTIRSSLKPGRIVFHVITDKKTYPAMHSWFALNTLSPAIVEVKGVHQFDWLTRENVPVLEAIETQHTVRSRFHGNHLARNSRGDSPRVFAAKLQAGSPTYTSVLNHIRIYLPELFPNLNKVVFLDDDVVVQRDLSSLWDIDLGGKVNGAVETCRGGDTWVMSKKFRNYFNFSHPLIANNFDPSECAWAYGMNIFDLSAWRKTSIKDKYHHWVRENLNSNFTLWRLGTLPPGLIAFRGHVHPIDPSWHLLGLGYQEKTDIPSVQKAAVIHYNGQSKPWLDIGFKHLQPFWTRHVNYSNEFIRNCHIMEPQL</aaseq>

Gene Sequence

<dnaseqindica>1..3#94..249#778..1365#1752..2054#2436..2726#ATGGTACTCACATCTCCTCTGATATTACCTTTCTCCTTTCAATTTTGTGGATTTGCTTAGTTCCTTATTTAATTTCTATATTCTAATGCGCAGAGGGTCATGAGGGATTTGTATAGGATGCTTGACGAAATAAATTCTGAAGAAGTACCTGTTGATTTGAAGGTCCCAGACTCTTTTGATGAATTCATCTGGGACATGAAGAATAATGATTATGATTTAAGGTCATTTGCTTTTAGGCTGAAGGCAACAGTAAGTTTCTTTCCCTGTTTTGAAGTACTGTCCATATTTTCTATTTCTGTCCAAGCATGTGAATTGCAAAGTTTCTCAGTAGGTTATGTTGGTGGTGACTTGTGCTTGAGAATGAACGTCATGATTCCTTTGAGTGTGTTTTTACTTTGGAATCCACTGTAAAGCTTGTGTCACTTCTTGGGTAATATTATTTTATAGCAGTTATGTTATTGTGTTGGATGGTGATGGACAAGCTATCTTGTACATAAAACTGTTATTTTCTCGCCATTATTTACAAGCGTTACATGCTAAACTGGTAGCTTCTACATAGCTAAACTCTAAATATCAAGGCTCACTATAGTAGTGATGAAAATAAATAAATATCTTGTTTACACCACATGTATACAACAGGTAGTATTTAATGATTCTCATCCTTCTAAAGTTGCCAAGCAGAACACTAATGGACTTGAAGGTCCCTAACATCATGCTAATATGCTTCTATTGTTCAGCAAGCACTAATATTTTCATTGCCTGCATAACATTACGCAGATGGAGAGCATGGACAGGGAATTGAGAACATCAAGGTTATCAGAGCAGTTAAACAAACACTACGCAGCAATTGCTATTCCCAAAGGCCTTCATTGCCTTTCCTTGCGTCTAACTGATGAATACTCATCCAATGCTCTTGCAAGGAAACAACTCCCTCCACCTGAGTTGATCCCTCGTCTTTCTGACAATTCCTATCTCCATTTTGTTTTAGCATCAGATAACATCCTTGCAGCCTCAGTTGTGGTCAGTTCAACAATTAGGTCATCATTAAAACCTGGCAGGATAGTTTTCCATGTCATCACTGACAAGAAGACCTATCCTGCTATGCACTCATGGTTTGCTTTGAATACCCTTTCTCCTGCCATTGTTGAGGTGAAAGGTGTTCACCAATTTGATTGGTTAACAAGAGAAAACGTGCCAGTTCTTGAAGCTATAGAAACTCAGCACACTGTCAGAAGTCGTTTCCATGGAAATCACCTTGCAAGAAATAGTAGAGGTGACAGCCCAAGGGTTTTTGCTGCCAAGCTGCAGGCAGGGAGTCCAACATATACTTCGGTGCTCAATCATATTCGAATATACTTGCCTGAGGTACAATATTTTTTTCTAACTTATTTTCAGTACAGTTTCATCAGCTTTGGCATAATTGATAAACAATTAAGCATGTGTTGTCATATGTAATAGAAACCTGAGTTTAAGCAATGGAAATACAACATATTTGAAGTTTCTTTCCTTGTTTTAAATGTAAATAATATATATGTATTTACTCTGCATAATTTTTTTTTTTGCAGGAATCTGTATTATGCAACAATTTATAATGTTCTGTAGTTAATTGGACTTTCCCATTAACTCATAGATCTGTAGTTGTGCAAATATATTCTAACTGCATCATTTATTTTTTCAATCTACCTCATTTTTTTTCCTGAAAGATTTGTAGTTGTGCAAATTTATTCTAACTTGCACTTTGTGAAATGCAGTTGTTCCCAAACCTCAACAAAGTTGTATTTCTTGATGATGACGTTGTTGTCCAGCGGGACTTGTCATCACTTTGGGATATTGATCTAGGTGGGAAGGTAAATGGAGCTGTTGAGACCTGCAGAGGTGGAGATACTTGGGTGATGTCCAAGAAGTTCAGAAATTATTTCAATTTCTCCCATCCCCTCATTGCCAATAACTTCGACCCTTCAGAGTGTGCATGGGCGTACGGCATGAATATATTTGACCTGAGTGCATGGAGAAAGACATCCATTAAAGATAAATACCACCATTGGGTCAGGGAGGTAAAACATCGATGCCACTACCTTTTCATCTGCACACCACCAGTTGTGTTCTACACATTTTTTTTCCATTTTATAGCAACTAAGTGAATATTTTCTGATATTGGAATTTGGAAGTCTAACAGGCTCCTTGTTTAAACATAACGCTCTTTTTGTTTGTGGCAACGTTCTAAAAGCTTATATAAAATTAATGCAGAGCTGCTGATATGTTAAAAACTAGGGAATTTTTCTCTTGATCACTTCAAAAGGCATATGGAATTATGCTGGACACTTTTTTTAATGATCATACAATTGACCAATGCTTGGTCCAAATTTTAACGTTCTAAATAAGCTCTGATGAGTTTGAGCTACCTACCTTACTCATGCTACCTTCTTTCCCTGCAGAATCTGAACTCAAACTTCACACTTTGGAGGCTTGGAACATTACCACCTGGCCTTATAGCATTTAGAGGTCATGTTCATCCTATTGATCCATCATGGCATCTTTTAGGCTTGGGGTATCAGGAAAAGACAGATATCCCCAGTGTTCAGAAAGCAGCAGTCATACATTACAATGGGCAAAGTAAACCATGGCTGGATATTGGTTTTAAGCATCTCCAGCCATTTTGGACAAGACATGTGAACTACTCGAATGAGTTCATAAGAAACTGTCATATAATGGAGCCCCAGTTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035949