BGIOSGA035956

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Revision as of 08:13, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035956| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035956, complete gene.| tag = OS12G05...")
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Gene Name

BGIOSGA035956

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035956, complete gene.

LocusTag

OS12G0576700

Ensembl Transcript ID

BGIOSGA035956-TA

Ensembl Protein ID

BGIOSGA035956-PA

Length

3949

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19311427..19315375

Sequence Coding Region

19315345..19315375,19314716..19314828,19314522..19314613,19314367..19314433,19314123..19314245
,19313905..19313997,19313617..19313746,19313094..19313175,19312881..19313013
,19312571..19312776,19312371..19312496,19311973..19312282,19311427..19311738

Genome Context

<gbrowseImage1> name=IndicaChromosome12:19311427..19315375 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:19311427..19315375 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAACTTGGTACACTAACTTAATTGCAGCTGCGGCGCACCCCGGGGAGCAGCCGCTGTCGAGGATTGCCGTCGAGAGGATGGTCCTTGCCGTCAACGAGTCGGCACATGTCAGGGCGTCCCCTTTGGTTCTTGGGCTGAAGGGTGAGACCAATGAATGGGTAGAGGTAGAGTTCTTCAATCCAAACCCCTCCAATACTGACTGGGTTGGAGTGTTTTCTCCTGCTGATTTTAGTTCTGCAATCTGTGAGGCTTATGGTGTTCCACAGTATTACCCAATGCTCTGCACAGCACCTATCAAGTACCAATATGCAAACTTCAATAATAATGGTTATAGTAAGTCTGGGAAGGGCAAACTGAAGCTTCAGTTGATCAACCAGAGGGAGGATTTCTCATTTGCTCTTTTTTCTGGTGGCCTCGAGAATCCAAAGCTGGTTGCTGTCTCAAACAAGATCGCATTTGCGAATCCGAAGGCGCCTGTTTACCCACGTTTAGCTCAAGGGAAGTCTTGGAATGAAATGACAGTAACTTGGACAAGTGGGTACGATTTTAAAGAAGCAGTTCCTTTCGTCGAATGGGGCGCGAAAGGGGGACAACGGGTCCTTTCTCCAGCTGGAACATTAACATTTGACAGAAATAGCATGTGTGGTGCACCGGCACGAACTGTCGGTTGGCGCCATCCTGGTTACATTCATACAAGCTACTTGAAAGAACTGTGGCCAGATTCACTGTATACTTACAGACTTGGCCATAGATTACCAAATGGTACTCACATCTGGAGTAAGTCATACAGCTTCAAAGCATCACCTTATCCTGGACAAGATTCCGTTCAGAGAGTAGTCATATTTGGAGACATGGGAAAGGCAGAGGCAGACGGTTCAAATGAGTTCAATGACTTCCAGCCAGGATCATTGAACACTACTTACCAGATCATCAGAGACCTGAAAAACATTGACATGGTTGTCCATATTGGGGATATTTGCTATGCAAATGGTTACTTGTCGCAGTGGGATCAGTTCACTGCGCAGATCGAGCCAATTGCTTCGACTGTTCCATACATGATTGGCATGGGTAATCATGAGAGGGATTGGCCTGGAACTGGTTCATTCTATGGAAACCTTGACTCTGGAGGAGAATGTGGTGTTCCTGCTCAAACTGTATTCTACACTCCTGCTGAGAACCGTGCAAAATTATGGTATGCGACAGACTATGGCATGTTCAGGTTCTGCATTGCTAATACAGAAGAGGACTGGAGGCCAGGGACTGAGCAGTACAAGTTCATCGAGCAATGCCTATCGTCCGTCGACAGGCAGAAGCAGCCATGGCTCATATTCCTTGCGCACCGAGTTCTCGGGTACTCATCCTGCACCTTTTATGAAGAAGAGGGTACATTTGAGGAACCGATGGGCCGAGAATCACTACAGGAGCTTTGGCAGAAGTACAAGGTTGACCTCGCCTTCTATGGCCATGTCCACAACTATGAAAGAACATGCCCAGTCTATCAGAATAAATGTGTTGTTAGTGGTTCAGATCATTACAGTGGTCCTTTCACCGCGACAACACATGTGGTCGTTGGAGGTGCTGGTGCTGGTACCTCCGACTCAGAATTCACCACTTCAAATATCAAATGGAGTTACTACAGGGACTTTGACTACGGTTTTGTCAAGCTCACAGCTTTAAATCATTCATCCTTATTGTTTGAGTACAAGAAAAGCAGTGACGGCAATGTGTATGATCATTTCACAATCTCACGTGATTACCGAGACATCCTGGCTTGTTCAATTGACAACTGTCCTCGGACCACACTGGCTACCTAA</cdnaseq>

Protein Sequence

<aaseq>MATWYTNLIAAAAHPGEQPLSRIAVERMVLAVNESAHVRASPLVLGLKGETNEWVEVEFFNPNPSNTDWVGVFSPADFSSAICEAYGVPQYYPMLCTAPIKYQYANFNNNGYSKSGKGKLKLQLINQREDFSFALFSGGLENPKLVAVSNKIAFANPKAPVYPRLAQGKSWNEMTVTWTSGYDFKEAVPFVEWGAKGGQRVLSPAGTLTFDRNSMCGAPARTVGWRHPGYIHTSYLKELWPDSLYTYRLGHRLPNGTHIWSKSYSFKASPYPGQDSVQRVVIFGDMGKAEADGSNEFNDFQPGSLNTTYQIIRDLKNIDMVVHIGDICYANGYLSQWDQFTAQIEPIASTVPYMIGMGNHERDWPGTGSFYGNLDSGGECGVPAQTVFYTPAENRAKLWYATDYGMFRFCIANTEEDWRPGTEQYKFIEQCLSSVDRQKQPWLIFLAHRVLGYSSCTFYEEEGTFEEPMGRESLQELWQKYKVDLAFYGHVHNYERTCPVYQNKCVVSGSDHYSGPFTATTHVVVGGAGAGTSDSEFTTSNIKWSYYRDFDYGFVKLTALNHSSLLFEYKKSSDGNVYDHFTISRDYRDILACSIDNCPRTTLAT</aaseq>

Gene Sequence

<dnaseqindica>1..31#548..660#763..854#943..1009#1131..1253#1379..1471#1630..1759#2201..2282#2363..2495#2600..2805#2880..3005#3094..3403#3638..3949#ATGGCAACTTGGTACACTAACTTAATTGCAGGTTCGTTTCATATGGCACACACTTGCATGAACAGCAGAGAGAGCTATAATTATTGGAAAATAATGTGCTTGACTGACTCTGAAAAGCATGGTGTTTTCAGATACAGATGGCACTGACACAGTCAATGGATGTAAATGATCTAATTTCTAGACTAGCTGAATTCCAGTCCCACACCAATTTCGACTCGAATTTGAAGAGGTAAAGGATTCTCCTATGGACCAGTGTCAGCACGCATTCATACGGTCATACCTCAATCATTGGATGTGTGTATTATTTATATGATCACATCTGCATCCATTTCCTCCAAGGAGTTCTTGAAGTTGCTACCTTTTACTTGGTGCCTTGCTCTCTCTTTCTTGGAGATTGCTGCAGTCTATAAGGAATTTCAGATAGGAGGTGGATTCCAGGCTAAGTTCATCACTGACTCTGGCTGGGTAATTTTTTTTTCAGGTCTCTGAAGGAGGAGTATGATCAGGCTGTGGGTGGTGGTCACATGGCTGGTTCTTTGCGCCGCAGCTGCGGCGCACCCCGGGGAGCAGCCGCTGTCGAGGATTGCCGTCGAGAGGATGGTCCTTGCCGTCAACGAGTCGGCACATGTCAGGGCGTCCCCTTTGGTTCTTGGGCTGAAGGTCAGCTCCATTTCTCACCTACTGCCATGAGAATCTGCAGTTCTTCAGAGTTCAGACACAGTAATCGTTTGCTGAGTTGGTTGTGAATTTCTGATGCTACAGGGTGAGACCAATGAATGGGTAGAGGTAGAGTTCTTCAATCCAAACCCCTCCAATACTGACTGGGTTGGAGTGTTTTCTCCTGCTGATTTTAGGTAACATGAACTGAAATTTTCAGGTGAAGCTGAAATTTAGCACAAGTTTTGATAATTCTTTTTTGTTTCTTGTGTTGGATATTGTCAGTTCTGCAATCTGTGAGGCTTATGGTGTTCCACAGTATTACCCAATGCTCTGCACAGCACCTATCAAGGTTGTCAAGTTTTTTCCTGTTCCAGTTAATTAAGATTCAGATATACATTTTCTTAAAAAAAATCAGATATAGCTCCTTGCCATGATTTTGACTTTTTTTTTTGGTCTTCAATTAATCGCAGTACCAATATGCAAACTTCAATAATAATGGTTATAGTAAGTCTGGGAAGGGCAAACTGAAGCTTCAGTTGATCAACCAGAGGGAGGATTTCTCATTTGCTCTTTTTTCTGGTGGCCTCGAGAATGTAAGACCAAAAGAAAAAAAAAGATTCTTCTGAACTTCTCTTTCTATATTTATTTTTTGGAAGGAAAAAACATACATTTTTCTTTTCATATTCTCATGACTGAAGATAATTCACTCCTGTAATAGCCAAAGCTGGTTGCTGTCTCAAACAAGATCGCATTTGCGAATCCGAAGGCGCCTGTTTACCCACGTTTAGCTCAAGGGAAGTCTTGGAATGAAGTAAGTTTCCCAACCAATCTGGAATTAACATGAATGTTCAAGTTATTCAGCTAGTCTTTTCTAAGTGGACCAATGGAGCAAGAGTGTAGCTTTCATCATACAAGATTGATGTCTAAAAAAAATTCAAAAAAAAGGTGACTGAATTAGTACTGTGGTAGATGACAGTAACTTGGACAAGTGGGTACGATTTTAAAGAAGCAGTTCCTTTCGTCGAATGGGGCGCGAAAGGGGGACAACGGGTCCTTTCTCCAGCTGGAACATTAACATTTGACAGAAATAGCATGTGTGGTATGTCACTATATCCTGTTGAACATCAGATAGCTAAAGTTCGGTCTTCTCTGAAAAAGTAATACTCCCTCCGTTTCAAATTATAAGTCATTTTGACTTTGGTCAAAGTCAAACTGCTTCAAGTTTGACCAAGTTTGTAGGAAAAAAATAATAACATTTTCAACCCAGGATAAATTTATTAAGAGAATGTATTTAATTATTGATTGAAACTAATTTGGTATTATAAATATTACTATATTTATCTATAAACATAGTTAAATTTGAAGGAGTTTGACTTTGACCAAAGTCAAAACGACTTATAATTTGAAATGGAGGGAGTAGTTTAGAATTTATAATGCCATCATAACTTAATATAGTAGTGTGGTACGGGTAACACTGGATTTCTGTTCTCTGAATGTCATATCAACCACTTCATTTCAACGATTCAATCTACTAATGTAGGTGCACCGGCACGAACTGTCGGTTGGCGCCATCCTGGTTACATTCATACAAGCTACTTGAAAGAACTGTGGCCAGATTCACTGTATGTGATCTATCTTGCCGCCTCCTGAATTTCGACACATCCAGAAATTAAGCAGTATGGTTTACTTTGCAACATTTCAGGTATACTTACAGACTTGGCCATAGATTACCAAATGGTACTCACATCTGGAGTAAGTCATACAGCTTCAAAGCATCACCTTATCCTGGACAAGATTCCGTTCAGAGAGTAGTCATATTTGGAGACATGGGAAAGGTAGATATTGTACTATTTGTATCTGGTGTTCATTAACTGTTGAGCATGGTGTTCTGAAAAAAAACACAGTGATAGTGATATTCTTTCCTGATATATTTCCTCAGGCAGAGGCAGACGGTTCAAATGAGTTCAATGACTTCCAGCCAGGATCATTGAACACTACTTACCAGATCATCAGAGACCTGAAAAACATTGACATGGTTGTCCATATTGGGGATATTTGCTATGCAAATGGTTACTTGTCGCAGTGGGATCAGTTCACTGCGCAGATCGAGCCAATTGCTTCGACTGTTCCATACATGATTGGCATGTCAGTATCTCATTTCATTGCTTGTGTTCTTCCAATTGTTCTTGTCTAACAATTGTAAATGGGCACTTCTGCAGGGGTAATCATGAGAGGGATTGGCCTGGAACTGGTTCATTCTATGGAAACCTTGACTCTGGAGGAGAATGTGGTGTTCCTGCTCAAACTGTATTCTACACTCCTGCTGAGAACCGTGCAAAATTATGGTAATTCTATGGCTCAGTGTGGCTACATCAGTTGTTACAACTTTTGCCATTTCTGAATTTTACTAAAACAACTTTTATCCTTCTTCAGGTATGCGACAGACTATGGCATGTTCAGGTTCTGCATTGCTAATACAGAAGAGGACTGGAGGCCAGGGACTGAGCAGTACAAGTTCATCGAGCAATGCCTATCGTCCGTCGACAGGCAGAAGCAGCCATGGCTCATATTCCTTGCGCACCGAGTTCTCGGGTACTCATCCTGCACCTTTTATGAAGAAGAGGGTACATTTGAGGAACCGATGGGCCGAGAATCACTACAGGAGCTTTGGCAGAAGTACAAGGTTGACCTCGCCTTCTATGGCCATGTCCACAACTATGAAAGAACATGCCCAGTCTATCAGGTGTGTATCTAATTACCATTTGCTTCAACTCAAATTGCAGTTTTGCAGATTGAAAAGTTTTTATTCACTGTATGCACAAGTTTGTAGGACAGTACCTTATAATATATTTTGTTACAAAAAACCTAACTGATAGGTAGTATTGTCGGTAATGCTACAGTCAACATATAGTTAGCACACTCGACAATTGCATGTTACAAAATTACTGTACTGACTACAATCTTTGATTGATTTCAGAATAAATGTGTTGTTAGTGGTTCAGATCATTACAGTGGTCCTTTCACCGCGACAACACATGTGGTCGTTGGAGGTGCTGGTGCTGGTACCTCCGACTCAGAATTCACCACTTCAAATATCAAATGGAGTTACTACAGGGACTTTGACTACGGTTTTGTCAAGCTCACAGCTTTAAATCATTCATCCTTATTGTTTGAGTACAAGAAAAGCAGTGACGGCAATGTGTATGATCATTTCACAATCTCACGTGATTACCGAGACATCCTGGCTTGTTCAATTGACAACTGTCCTCGGACCACACTGGCTACCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035956

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA035956&oldid=52261"