BGIOSGA035961

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Revision as of 08:13, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035961| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035961, complete gene.| tag = OS12G05...")
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Gene Name

BGIOSGA035961

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035961, complete gene.

LocusTag

OS12G0574900

Ensembl Transcript ID

BGIOSGA035961-TA

Ensembl Protein ID

BGIOSGA035961-PA

Length

4565

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19267924..19272488

Sequence Coding Region

19272381..19272488,19272149..19272254,19271908..19272057,19271442..19271645,19271229..19271381
,19270722..19271045,19270485..19270552,19270221..19270335,19269916..19270021
,19269324..19269417,19269045..19269235,19268821..19268920,19268620..19268736
,19268137..19268193,19267924..19268031

Genome Context

<gbrowseImage1> name=IndicaChromosome12:19267924..19272488 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:19267924..19272488 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGCGGCATAGCCCTCGTCCTCTCCGGCGGCGGCCGCGTAGTCGTCGCTCCCTCCGCCGCCGCCGCCGCCGCCGTTGCTGCCGTCGGAATCCAACCAAGCGACGAGGGGAAGGGCGTGACGGTGGATGAGCTCAAGGCAGCCCTGCGGCGGCGTGGCCCGGATAGCCTCGGCTGCGAGAGGCTCCGCGTCCGCGCGGATGGCACGACCTTAGGGAGTGATGGGTGTGATTGTGGAGTTGGGAATGGGGGTGATGTGGGTGACACTGAGTTGTGCTTCATCGGAGCAACGCTGCCGCTCAGGGGAGCTGAGCCGATTTTGCAGCCGATGGTGGGTCAATCAGGAAATGTTTTAGTATATAACGGTGAGATCTATGGAGGAGTCCATGTTGCTGATGACCAAAATGATACTCAATCACTTCTGTCATCACTGGAATCTTGTTGTTCCTGTGAGTGCCATGCTCTTGTTAGAGATGAAGCATGTCTCTGTTGTGGAAGTGTTGGGAAATCAGTTCCACAGATCCTTTCCACAATCAAAGGCCCCTGGGCTTTGATATACTGGCAGGCAGCCTGCTTGAACTCTCAGAAGGACTCAAAAACAATGTGGTTTGGCCGGGATGCATTCGGGAGAAGAAGCCTCTTGGTACATTGGCCGTCACCTGATGATCCACGCTTTATATTATCATCAGTATCACCCCCTTCATTTGCAAGTAATAACTCTGCGCCAACTGTCAAAGTTATGGAGTCAGGGGAAGATAATGATTTTCCTGAGTCCACCAACATGAGTTACTGGGAAGAGCTTCCTTGTGGGATATACAGCATCCAATTGAAAAGCCTTGAAAAAAGTGGCATGTGTATGAAGGAAGCATGTGTCTCCGAAGTTAGGAGGCATGACTGGATCAACTCTTCATTGGATGAATTAATCCAATGGAAGAGGAAATCGATAGTTCCTACTGTGGATGACTTAACTTCACATCAGAATTCTGTAGGGGACTATTGTTTGTCTCAGAGCTTCAGAAACTCAACCGAAGCTGACAAAAATGCTGCGTATAAGGTGTTGATTGCGTTGCGGGAATCTGTAATGCTGCGAACCAATTTGAACAGACTCTTTCAGGATGATCTAAATAAACTAAAGGATGATGAGCTAGCCCCAATAGCAATCCTTTTCTCTGGTGGCTTGGACTCCATGATACTTGCAGCATTATTAGACCAGTGCCTTGATTCCAAATGGACAATTGATTTGTTGAATGTCAGTTTTGATGGGCAACTTGCTCCAGATAGGATTTCTGCACTGGCAGGACTGAAGGAACTTCAGAGAATTTCCCCTATCCGTAGATGGCGTCTTGTTGAGATTGACACAGTTTTGACAAACTTGAAAGGAGAAAGTGAACATGTGATGTCACTTATATACCCTTCAAATACTTATATGGATTTAAATATTGGTATAGCTCTCTGGTTGGCTGCTGGTGGGGATGGTTGGGTGGATGGAAGTATATGCAACATGCAAGATGGTTGTCGCTACAAGTACAAGTCAACTTCTAGAGTTCTTTTAGTCGGTTCTGGGGCTGATGAGCAGTGCGCTGGTTATGGAAGACATAGGACTAAATATAGACTTGGAGGCTGGGTTTTACTTGATGAGGAGATGAGACTAGATGTACAGAGAATCTGGAAAAGAAATATGGGAAGAGACGATAGGTGCATTTCTGACCATGGCAAGGAGGCACGTTTTCCATTTCTTGATGAGAATGTGATCAAAACTTTGTTGGAAATTCCATTGTGGGATATTGCTAAACTTGATGAACCTGTTGGAAAGGGCGACAAGAAGATCTTGAGAGAGGTTGCAAACCTACTGGGCTTAAAAGAGGCTGCACTTCAACCAAAGCGGGCAATCCAGTTTGGTTCAAGAATAGCGAGAGAATCAAACCGCAAGAACTTCGGGAGCAACCGAGCCGCGAACCAGGCTTCCGCTGGCAGCGTGGAGATTCACCAGCGTGCACGCTGA</cdnaseq>

Protein Sequence

<aaseq>MCGIALVLSGGGRVVVAPSAAAAAAVAAVGIQPSDEGKGVTVDELKAALRRRGPDSLGCERLRVRADGTTLGSDGCDCGVGNGGDVGDTELCFIGATLPLRGAEPILQPMVGQSGNVLVYNGEIYGGVHVADDQNDTQSLLSSLESCCSCECHALVRDEACLCCGSVGKSVPQILSTIKGPWALIYWQAACLNSQKDSKTMWFGRDAFGRRSLLVHWPSPDDPRFILSSVSPPSFASNNSAPTVKVMESGEDNDFPESTNMSYWEELPCGIYSIQLKSLEKSGMCMKEACVSEVRRHDWINSSLDELIQWKRKSIVPTVDDLTSHQNSVGDYCLSQSFRNSTEADKNAAYKVLIALRESVMLRTNLNRLFQDDLNKLKDDELAPIAILFSGGLDSMILAALLDQCLDSKWTIDLLNVSFDGQLAPDRISALAGLKELQRISPIRRWRLVEIDTVLTNLKGESEHVMSLIYPSNTYMDLNIGIALWLAAGGDGWVDGSICNMQDGCRYKYKSTSRVLLVGSGADEQCAGYGRHRTKYRLGGWVLLDEEMRLDVQRIWKRNMGRDDRCISDHGKEARFPFLDENVIKTLLEIPLWDIAKLDEPVGKGDKKILREVANLLGLKEAALQPKRAIQFGSRIARESNRKNFGSNRAANQASAGSVEIHQRAR</aaseq>

Gene Sequence

<dnaseqindica>1..108#235..340#432..581#844..1047#1108..1260#1444..1767#1937..2004#2154..2268#2468..2573#3072..3165#3254..3444#3569..3668#3753..3869#4296..4352#4458..4565#ATGTGCGGCATAGCCCTCGTCCTCTCCGGCGGCGGCCGCGTAGTCGTCGCTCCCTCCGCCGCCGCCGCCGCCGCCGTTGCTGCCGTCGGAATCCAACCAAGCGACGAGGTACTGTTCCTACCATCCTCGAATGGAAAAGTATGGAAACCCCCTCCCTTTCGGATTGGCATCCGCCGTGGTTTCCCAAACCCTAAACCCTGGAATCGAGTTAGTTAGCCTGGTGCGTGCTTGCAGGGGAAGGGCGTGACGGTGGATGAGCTCAAGGCAGCCCTGCGGCGGCGTGGCCCGGATAGCCTCGGCTGCGAGAGGCTCCGCGTCCGCGCGGATGGCACGACCTTAGGTTGCTTTGTAACCCCCTGTGCTTGGGAGTTGGGAGTTTTGGTTGATTAATTGCTTCGGGCGTTTCGTGATTTGATTGTCCTGCGTTTCAGGGAGTGATGGGTGTGATTGTGGAGTTGGGAATGGGGGTGATGTGGGTGACACTGAGTTGTGCTTCATCGGAGCAACGCTGCCGCTCAGGGGAGCTGAGCCGATTTTGCAGCCGATGGTGGGTCAATCAGGAAATGTTTTAGTATATAACGGTAATTCTGCTCATCTAAAATTTTCCCTGTTACTATTACCAATTGATTCCTTTTCGTATTTCATTGTGTGGAACGTATGCTATTGTGGTGTAAGATATAGCCTTTACATGTACCGATTTCCATACTCTGGGACTTTTCCTGATTGATGATTCGAACTCGTGCATCGATTGACTTTTTAGTAGCGTATTAGTGTTGCTTCCATGTTAGTAGTTGAGTGATTAGCTTACTTGAACTTGATACTGAAACTATTTTTTCAATTAAGGTGAGATCTATGGAGGAGTCCATGTTGCTGATGACCAAAATGATACTCAATCACTTCTGTCATCACTGGAATCTTGTTGTTCCTGTGAGTGCCATGCTCTTGTTAGAGATGAAGCATGTCTCTGTTGTGGAAGTGTTGGGAAATCAGTTCCACAGATCCTTTCCACAATCAAAGGCCCCTGGGCTTTGATATACTGGCAGGCAGGTAATCGTGATGTTTGTCCTGTTTGCAATTTGTTGTAGATTGAACTTTCTAACACCTGAGCCTGCTTGAACTCTCAGAAGGACTCAAAAACAATGTGGTTTGGCCGGGATGCATTCGGGAGAAGAAGCCTCTTGGTACATTGGCCGTCACCTGATGATCCACGCTTTATATTATCATCAGTATCACCCCCTTCATTTGCAAGTAATAACTCTGGTAAGATATTTTTAATCTTGATGTGCCTACCATATCAAATGTTTGCATATATTCTGTTCTTTTACAAAAAAATTTGAAAATTTCACCTAATACTTCAAATTCTATTCATGCTTTGGAGAGTGATTATTACTCTCTACTTGATTGATAATCATCTCATTTATATACTCTTCTTCACTCCTACAGCGCCAACTGTCAAAGTTATGGAGTCAGGGGAAGATAATGATTTTCCTGAGTCCACCAACATGAGTTACTGGGAAGAGCTTCCTTGTGGGATATACAGCATCCAATTGAAAAGCCTTGAAAAAAGTGGCATGTGTATGAAGGAAGCATGTGTCTCCGAAGTTAGGAGGCATGACTGGATCAACTCTTCATTGGATGAATTAATCCAATGGAAGAGGAAATCGATAGTTCCTACTGTGGATGACTTAACTTCACATCAGAATTCTGTAGGGGACTATTGTTTGTCTCAGAGCTTCAGAAACTCAACCGAAGCTGACAAAAATGCTGGTAAGGGCCTAATTGACTGGGAAATAGAGATCTTTTCTTCTATGTTTCCAGCAGTTCACATAAAGCAGTAAAGTTCTACAGATAATTACTCCTGAAGTTTTTTGAAACAAAATACTGTTAAGGAAAGTTGCTAATACAGATACTTCTTTACAATTATATTTCCATTCAGCGTATAAGGTGTTGATTGCGTTGCGGGAATCTGTAATGCTGCGAACCAATTTGAACAGACTCTTTCAGGTGAGTGACCACCAAGGCACTGACTTAAAACTGCTATATGACTCTTTTTTCCCCAACTCCAGCAGGCTACTTGAAAATAGTTCTATATTGTCTGGACCTTGTTGTGTTTCTTGTTATATACTCTATTGATAGTCCATTCTTGTGGACAGGATGATCTAAATAAACTAAAGGATGATGAGCTAGCCCCAATAGCAATCCTTTTCTCTGGTGGCTTGGACTCCATGATACTTGCAGCATTATTAGACCAGTGCCTTGATTCCAAATGTAAGTTCAACTATTGCTTTTACTGTTTCTTGTTCAATACTGTTAGCAGTTCAATATATTAGCCAACCGTTGCTTTTATTGTGTTCAGTACTCTAAGAATTTTAAATTTTTATAGTACATTAGTGCAAGAAGATTAGCTGCTTATGCTACACACTATACTTCAATATATATGAGGAACAGTTATTGAAATTTTGAACAGGGACAATTGATTTGTTGAATGTCAGTTTTGATGGGCAACTTGCTCCAGATAGGATTTCTGCACTGGCAGGACTGAAGGAACTTCAGAGAATTTCCCCTATCCGTAGGTGATTTGACTTCTGAACATCTCACATCCTTAGCCATGAGCTACCTTTGGTCAAGTCTTAACTGTTTTGCACACTTCAATTGCACAAGATTTCTGTTTAATTGAATTATGTACTCCCTTTTTGACACTCTCATGTGGGGGCTCCCCCTGCAGTGTTTTTGTAAAAAAAAAAATTGACACTCTTACAGCCTGATGAATTATTTGCCTGTTTTGTTTCCTTCTATAGTCTTCTAGCTGGCCAGTGAATTTGATCAAGCCACCGATGCAAATTGAATATATTATGTTTAATTACACTTTTGTGCCTTCTTATTGATAGCTCATCCATGTTTACCTTCCATTTGTTTTCTTCTATAATCAAGTGGAAGCCTTTTGATTGGACTTCCTTATTTCCATACTCTCGTTACTAAATATACTTCTCTACCCCTTTTTATTGTTTACCATGCTGCAATCATTATGTTTGTGTAGTGCTAAATCGAGCTGTTTGTTTTCTTACTCGCAGATGGCGTCTTGTTGAGATTGACACAGTTTTGACAAACTTGAAAGGAGAAAGTGAACATGTGATGTCACTTATATACCCTTCAAATACTTATATGGTTTGTACCTTGGTTATAGCTTTGATATATTACTTCAAATGTTTTACAGTAGCTTTATAAAGTTATAATTCTGCTTTTTTTTGTACAGGATTTAAATATTGGTATAGCTCTCTGGTTGGCTGCTGGTGGGGATGGTTGGGTGGATGGAAGTATATGCAACATGCAAGATGGTTGTCGCTACAAGTACAAGTCAACTTCTAGAGTTCTTTTAGTCGGTTCTGGGGCTGATGAGCAGTGCGCTGGTTATGGAAGACATAGGACTAAATATAGACTTGGAGGGTATGTGTGTAAGCATCAATTTGTTTGTTCTATACTTGCATATCAGGTTGTGCAATGCATACCCCATGAGATGTTCTTACACTGCAACTGCAAGAATGTTGAATTTTTTTTTGCCTCTATTTAGCTGGGTTTTACTTGATGAGGAGATGAGACTAGATGTACAGAGAATCTGGAAAAGAAATATGGGAAGAGACGATAGGTGCATTTCTGACCATGGCAAGGAGGTAATTTCGGTCATGCTTTCTGAATTAGAAATGTTCAGCAATTTTTGTTTAGCAATCTGATGTGTACTACTGTCCATGCTACAGGCACGTTTTCCATTTCTTGATGAGAATGTGATCAAAACTTTGTTGGAAATTCCATTGTGGGATATTGCTAAACTTGATGAACCTGTTGGAAAGGGCGACAAGAAGATCTTGAGAGAGGTTTGTGCTTGTTCTGAGCTTAGTCCATATGGGGGCTGTTACATTAAATTGAAGTTCGCATTTGAAATTCACATATAACTCATTGAGTAAAAGCAACACATAGAATTCCTTTTCTAGAAAAAAAAAAGTTCTGGTGGAGCATGATTTGCATTCTTGTGTTTCAATGCATTGATTTTTGTTAAGTAGTAACATGTACTCCCTCCGTTTCATAATGTGAGACTTTCTAGCATTGCCCACCTTCATATAGATGCTAATGTATCTAGACACATATGTATATCTAGATTTATTAACATCTATATGAATGTGGGAAATGCTAGAACGTCAAACGGAGGAAGTACATGATACATCACGATGCATAAATCTTCTTTTTGTAACTCAATATCTGTGGGTGACGTTAATACATACATATCTGTGATGATGTTGAAGGTTGCAAACCTACTGGGCTTAAAAGAGGCTGCACTTCAACCAAAGCGGGCAATCCAGGTGCATATACCAACCAGTTAATTCCATAGAATTAATATTTAAAGAAAACATAGAAGCTGTAGTTTGTGACTTGACACCACTACTCCCATCCTATGCTTCACGCAGTTTGGTTCAAGAATAGCGAGAGAATCAAACCGCAAGAACTTCGGGAGCAACCGAGCCGCGAACCAGGCTTCCGCTGGCAGCGTGGAGATTCACCAGCGTGCACGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035961