BGIOSGA035978

From RiceWiki
Revision as of 08:13, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035978| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035978, complete gene.| tag = OsI_387...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA035978

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035978, complete gene.

LocusTag

OsI_38780

Ensembl Transcript ID

BGIOSGA035978-TA

Ensembl Protein ID

BGIOSGA035978-PA

Length

1365

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:18909122..18910486

Sequence Coding Region

18909122..18910486

Genome Context

<gbrowseImage1> name=IndicaChromosome12:18909122..18910486 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:18909122..18910486 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGACGGTAGCGACGGAGCCCGGGACCTGTCTCCGTCGCTTGCCGGATGACCTCGTCGCCGACGAGATCCTAACCCGGCTGCCGGCGAGGTCCCCCGCGCGGTTCGCCTCCGTCTGCGGCGCGTGGCGCGCCGCCATCTCCGACGACCCCTCCTCCTTCCTCCGCCGCCGCCGCAAGAAGGAGAACTCCTCCTCCTTCCTCCTCCTCCTGTACGCGTTGGTGGAGGATGCCGATGGGCGGCTCGCCTTCTCCAACCACGTCCCCTTCTACCGCCTCCGGTGGCCGGACGGCGCCGGCGATGGCCGCCGCCGGTGCCCGCGGCTCGCGCACGTGTCGGTGTTCGGCGACGGCGGCGAGGAGCCCACCCTGTCGCTGCCCCGCACCTGCGACGGCCTCGTGCTGCTCCCCAACGGCGACGACGTCCACGTCATCAACCCGGCCACCGGCGACGTCCTCACGCTGCCTCAAAGCAGCCGTGTCGCCGCCGCCGGCGCGTCGTGGCGGCACTCGACCGGGCTGGGCCTCGACGCTCGCACAAACACCTACAAGGTCGCTCGCTACGTCCACCTCTCCACCGCCGCCGCCGCCGCCGCCGCCGACGATGACGACGGCGCCGCTGTCATGGAGGTGTTCACGATCGGTCACGGCGACGCCGCCGCCGCCGCCGTCGTACCCGGTCTGCCACGTGCGAACCGCCATCCACTCCAGCGGAAACCTCTTCTGGAAACTCCAACTCCGACGATCGCCACGGCGGCGGCGGGCAGCTTCCTCCTCCTCCGCTTCAATCTAGCTCACGAAACGTTCACCGTCGTCCACCATCCACGGCCATCATCTCCACTGGCACCGCCATTGCTGTCCGAGCTCGACGGCGAGCTGTGCATCGGGCTGCTCGTGTCAGGTCGGCAAGAGCTCTGGGTGTACAACAACAATGGCGGCGGCGGCAGCGATGATCGGTGGCAATGGGAGCAGCGGTTCAGCATCGCCGTGTCGGGGCCGGACGCCATGTACCTGCCATTGGGGGTGCTTCGCCGCCATGATCGACTGCTTCTTCAGAAGGGTGTACACCTGTACCACCATGACTCGGGTGGTGGCGAGGAGAGTGTCATGGAAGTGGCGCGAATGGATGAGTTCGAATTTGAATGGGGTTTCCCGGGAAAGCCCTACGCGTTCATGGTGATTCCCTACACGGAGAGCCTTGTCCGGGTTACTGCCACGAGGCCCATTAACAAGGCAGCGACGGTGACGGCGATGGCGACGGCAGGGGAGACGGTGGCGATGAAGATGGGGGCACTTGAAAGGCCAGCGTGCGCGTTGAGCGAACAGCCGTTACATTGGCGACATGTGGGATGTGTAGAGAAATGA</cdnaseq>

Protein Sequence

<aaseq>METVATEPGTCLRRLPDDLVADEILTRLPARSPARFASVCGAWRAAISDDPSSFLRRRRKKENSSSFLLLLYALVEDADGRLAFSNHVPFYRLRWPDGAGDGRRRCPRLAHVSVFGDGGEEPTLSLPRTCDGLVLLPNGDDVHVINPATGDVLTLPQSSRVAAAGASWRHSTGLGLDARTNTYKVARYVHLSTAAAAAAADDDDGAAVMEVFTIGHGDAAAAAVVPGLPRANRHPLQRKPLLETPTPTIATAAAGSFLLLRFNLAHETFTVVHHPRPSSPLAPPLLSELDGELCIGLLVSGRQELWVYNNNGGGGSDDRWQWEQRFSIAVSGPDAMYLPLGVLRRHDRLLLQKGVHLYHHDSGGGEESVMEVARMDEFEFEWGFPGKPYAFMVIPYTESLVRVTATRPINKAATVTAMATAGETVAMKMGALERPACALSEQPLHWRHVGCVEK</aaseq>

Gene Sequence

<dnaseqindica>1..1365#ATGGAGACGGTAGCGACGGAGCCCGGGACCTGTCTCCGTCGCTTGCCGGATGACCTCGTCGCCGACGAGATCCTAACCCGGCTGCCGGCGAGGTCCCCCGCGCGGTTCGCCTCCGTCTGCGGCGCGTGGCGCGCCGCCATCTCCGACGACCCCTCCTCCTTCCTCCGCCGCCGCCGCAAGAAGGAGAACTCCTCCTCCTTCCTCCTCCTCCTGTACGCGTTGGTGGAGGATGCCGATGGGCGGCTCGCCTTCTCCAACCACGTCCCCTTCTACCGCCTCCGGTGGCCGGACGGCGCCGGCGATGGCCGCCGCCGGTGCCCGCGGCTCGCGCACGTGTCGGTGTTCGGCGACGGCGGCGAGGAGCCCACCCTGTCGCTGCCCCGCACCTGCGACGGCCTCGTGCTGCTCCCCAACGGCGACGACGTCCACGTCATCAACCCGGCCACCGGCGACGTCCTCACGCTGCCTCAAAGCAGCCGTGTCGCCGCCGCCGGCGCGTCGTGGCGGCACTCGACCGGGCTGGGCCTCGACGCTCGCACAAACACCTACAAGGTCGCTCGCTACGTCCACCTCTCCACCGCCGCCGCCGCCGCCGCCGCCGACGATGACGACGGCGCCGCTGTCATGGAGGTGTTCACGATCGGTCACGGCGACGCCGCCGCCGCCGCCGTCGTACCCGGTCTGCCACGTGCGAACCGCCATCCACTCCAGCGGAAACCTCTTCTGGAAACTCCAACTCCGACGATCGCCACGGCGGCGGCGGGCAGCTTCCTCCTCCTCCGCTTCAATCTAGCTCACGAAACGTTCACCGTCGTCCACCATCCACGGCCATCATCTCCACTGGCACCGCCATTGCTGTCCGAGCTCGACGGCGAGCTGTGCATCGGGCTGCTCGTGTCAGGTCGGCAAGAGCTCTGGGTGTACAACAACAATGGCGGCGGCGGCAGCGATGATCGGTGGCAATGGGAGCAGCGGTTCAGCATCGCCGTGTCGGGGCCGGACGCCATGTACCTGCCATTGGGGGTGCTTCGCCGCCATGATCGACTGCTTCTTCAGAAGGGTGTACACCTGTACCACCATGACTCGGGTGGTGGCGAGGAGAGTGTCATGGAAGTGGCGCGAATGGATGAGTTCGAATTTGAATGGGGTTTCCCGGGAAAGCCCTACGCGTTCATGGTGATTCCCTACACGGAGAGCCTTGTCCGGGTTACTGCCACGAGGCCCATTAACAAGGCAGCGACGGTGACGGCGATGGCGACGGCAGGGGAGACGGTGGCGATGAAGATGGGGGCACTTGAAAGGCCAGCGTGCGCGTTGAGCGAACAGCCGTTACATTGGCGACATGTGGGATGTGTAGAGAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035978