BGIOSGA035985

From RiceWiki
Revision as of 08:13, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035985| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035985, complete gene.| tag = OS12G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA035985

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035985, complete gene.

LocusTag

OS12G0567500

Ensembl Transcript ID

BGIOSGA035985-TA

Ensembl Protein ID

BGIOSGA035985-PA

Length

6353

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:18853358..18859710

Sequence Coding Region

18859174..18859710,18858039..18858232,18856368..18856870,18855677..18855815,18855501..18855572
,18855242..18855313,18855084..18855164,18854738..18854907,18854416..18854651
,18854208..18854334,18853874..18853942,18853358..18853767

Genome Context

<gbrowseImage1> name=IndicaChromosome12:18853358..18859710 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:18853358..18859710 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAAGCCGCCGCAACAGTTCACCGGCGGTGGCGGCGGCGGCTGCTGCCGAAGCTGATGCTACTCCTGTGCGCCGTCGTCCATGGCCAGCAGCCGGACAGCCTCGGCTTCATCAGCATCGACTGCGGCATCCCCGACGGCGGCGGCTACTCCGACGAGTCCACCCGCGGCCTCCGCTACGTCCCCGACGCCGGCTTCCTCGACGCCGGCGCGGGCCTCAGCGCCGGCATCAACCCGCCCTACACCGACCGCGACCTCGCCGCCCGCTACCTCACCGTCCGCTACTTCCCCGGCGCCGCCTCCGCCGCCGGCGAGCGGGGCGGCTGCTACACGCTCCGGCAGCTCTCGCCGGGAGGGAGGTACCTCGTGAGGGCCACCTTCTACTACGGCAACTACGACGGCGCCATCGCCATGCTCCCCGTCGTCTTCGACCTCCACCTCGGCGCCAACCGGTGGACCGCCGTCAACGTCACCGCCGCCGACGCCATCTACATCTTCGAGGCCGTCGTGTCGCCGCCGGCGGACTTCCTCCAGGTGTGCCTCGTGAACATAGGGAAGGGAACGCCGTTCATCTCCGGGCTGGACCTGAGGCCGCTGAAACCGGAGCTGTATCCGGAGGCGACGGCGAACCAGTCGCTGCTTCTGCTCAACCACGACCGCCCGCCGGCGAGGTTCGCCTTCAACCGCTACCAGTTCTGGCGCCCGGCGAGCTACTACAAACTATTCAGGTACCCATTCGATCCGTACGATCGGCTGTGGCAGCCGTACGGCGACGACCCGTCGTGGACGAACATCACCGTCGCCGCCGCCGTCGACGTCACCAACATCAGCCGCTCCGACGACCCCTCCCCGATCCTCCGCAGCGCCGCCACGCCGGCGAACGCCACCGTCCGCCGCCTCGACTTCCCCTGGAGCTCCGACGACGCCGCCACCACCACCTACCTCCTGCTGCTCTACTTCGCCGAGCTGCAGCGGCTGCCGGCCGGCGCAGCGCGGCGGTTCGACGTCCTCGTCGACGGCGACGCCTCCGCCGGCGGCGGGCGGCGAGGGTACACGCCCCGGTACCTCGCGGCGGAGGTCGTGAGGGCGACGGTGCGGGCGGCGCGGCCGGGGCAGCGGCACGTCGTGTCGCTCGTCGCCGCGCCGGACTCCGCGCTGCCGCCCATCGTCAACGGGCTCGAGATCTACTCGGTGCAGCCGATGCCTGAACTCGCGACGAACGACAGAGACGCGAAGGCGATGATGGAAATTCGCGATAACTATGAACTGAAGAAGAATTGGATGGGGGATCCATGTGCTCCAAAGGCATTTGCCTGGGTTGGATTGAACTGTAGTTATTCTTCATCTGATCCTGCATTGGTAACAGCTTTGAATTTGTCATCAAGCGTGTTGATTGGTCCAGTTAATCTTTCTTTTGGTGATCTGAAGTCCCTGCAATACTTGGATTTGTCCAATAACAGCTTATCTGGCCCAATACCTGATTTTCTAGTGCAAATGCCAGCACTCAAGTTCCTTGATTTGTCAAGCAATAAACTCAGTGGATCGATTCCTTCTGACTTACTTCAAAAGAGAGAAAATGGATCACTTGTATTAAGGATTGGCAACAATGCAAATCTCTGCTATAATGGGGCTAATAATACCTGTGCTCCGGAGAGTAAGCAAAGCAAGAGAATCCTTGTGATTGCAATAGCTGTTCCAATAGTTGCAGCAACTCTGCTGTTTGTGGCAGCAATTGTTATCCTTCACAGGAGGAGGAATAAACAAGATACCTGGATCACAAACAATGCAAGACTTATTAGCCCTCACGAAAGGTCGAACGTATTCGAGAACCGGCAATTCACCTACAGGGAATTGAAACTCATGACATCAAACTTCAAAGAGGAAATAGGGAAAGGAGGATTCGGCACTGTCTTCCTAGGATATTTGGAGGATGGAACTCCAGTTGCTGTCAAGATGTGCTCAAAAACATCTTCTGAAGGGGATAAAGAGTTTTTAGCTGAGGCTCAGCACCTGACTAGAGTTCATCACAGAAACCTTGTTTCCTTGATTGGATATTGCAAGGATAAGAAACATCTGGCACTTGTTTATGAGAACATGCAAGGAGGAAACCTGGAGGATCGTTTAAGAGGAGAGGCCTCCATTGCTGCACCACTCACCTGGCATCAACGTCTGAAGATCGCTCTCGACTCTGCTCAAGGATTGGAGTACCTGCACAAGTCATGCCAGCCTCCATTGATCCACAGGGACGTCAAGACTCGCAACATCCTCCTCTCCGGCGACCTCGACGCCAAGATCGCCGACTTCGGCCTGACCAAGGTGTTCGCCGGCGACGTCGTGACCCACGTCACCACGCAGCCGGCCGGCACGCTGGGCTACCTCGACCCGGAGTACTACCACACCTCGCGCCTCAGCGAGAAGAGCGACGTCTACAGCTTCGGCGTCGTCCTCCTCGAGCTCGTCACCGGCCGCCCACCGGCCGTCCCCCTCGGCGACGGCGACGGCGGCGGCGGCGAGAGCGTCCACCTCGCCGTGTGGGCGAGGCAGCGGCTGGCCGAGGGCGACATCGAGAGCGTCGCGACGCGGCCATGGGAGGCTGCTTCGAGGTGA</cdnaseq>

Protein Sequence

<aaseq>MAEAAATVHRRWRRRLLPKLMLLLCAVVHGQQPDSLGFISIDCGIPDGGGYSDESTRGLRYVPDAGFLDAGAGLSAGINPPYTDRDLAARYLTVRYFPGAASAAGERGGCYTLRQLSPGGRYLVRATFYYGNYDGAIAMLPVVFDLHLGANRWTAVNVTAADAIYIFEAVVSPPADFLQVCLVNIGKGTPFISGLDLRPLKPELYPEATANQSLLLLNHDRPPARFAFNRYQFWRPASYYKLFRYPFDPYDRLWQPYGDDPSWTNITVAAAVDVTNISRSDDPSPILRSAATPANATVRRLDFPWSSDDAATTTYLLLLYFAELQRLPAGAARRFDVLVDGDASAGGGRRGYTPRYLAAEVVRATVRAARPGQRHVVSLVAAPDSALPPIVNGLEIYSVQPMPELATNDRDAKAMMEIRDNYELKKNWMGDPCAPKAFAWVGLNCSYSSSDPALVTALNLSSSVLIGPVNLSFGDLKSLQYLDLSNNSLSGPIPDFLVQMPALKFLDLSSNKLSGSIPSDLLQKRENGSLVLRIGNNANLCYNGANNTCAPESKQSKRILVIAIAVPIVAATLLFVAAIVILHRRRNKQDTWITNNARLISPHERSNVFENRQFTYRELKLMTSNFKEEIGKGGFGTVFLGYLEDGTPVAVKMCSKTSSEGDKEFLAEAQHLTRVHHRNLVSLIGYCKDKKHLALVYENMQGGNLEDRLRGEASIAAPLTWHQRLKIALDSAQGLEYLHKSCQPPLIHRDVKTRNILLSGDLDAKIADFGLTKVFAGDVVTHVTTQPAGTLGYLDPEYYHTSRLSEKSDVYSFGVVLLELVTGRPPAVPLGDGDGGGGESVHLAVWARQRLAEGDIESVATRPWEAASR</aaseq>

Gene Sequence

<dnaseqindica>1..537#1479..1672#2841..3343#3896..4034#4139..4210#4398..4469#4547..4627#4804..4973#5060..5295#5377..5503#5769..5837#5944..6353#ATGGCGGAAGCCGCCGCAACAGTTCACCGGCGGTGGCGGCGGCGGCTGCTGCCGAAGCTGATGCTACTCCTGTGCGCCGTCGTCCATGGCCAGCAGCCGGACAGCCTCGGCTTCATCAGCATCGACTGCGGCATCCCCGACGGCGGCGGCTACTCCGACGAGTCCACCCGCGGCCTCCGCTACGTCCCCGACGCCGGCTTCCTCGACGCCGGCGCGGGCCTCAGCGCCGGCATCAACCCGCCCTACACCGACCGCGACCTCGCCGCCCGCTACCTCACCGTCCGCTACTTCCCCGGCGCCGCCTCCGCCGCCGGCGAGCGGGGCGGCTGCTACACGCTCCGGCAGCTCTCGCCGGGAGGGAGGTACCTCGTGAGGGCCACCTTCTACTACGGCAACTACGACGGCGCCATCGCCATGCTCCCCGTCGTCTTCGACCTCCACCTCGGCGCCAACCGGTGGACCGCCGTCAACGTCACCGCCGCCGACGCCATCTACATCTTCGAGGCCGTCGTGTCGCCGCCGGCGGACTTCCTCCAGGTATATACGTTATAAATTTGGACAAATTTTGTTGTTCTTTTTTAAGAAATGAATTTCACTTTGAGGCTTTTTTAACTTGAACAGTTTACCGAGCGGTTTCTCTGTGTGAACCAGCAAGAATGGCTCATAAGCATGTAATCGAGAGATTATATTGTCGATTTTTAAAACACCGGTTATCACATCTCTTAGTACAAATTCTAAAAGATATACCAGGCACCACCAGGGTTCAAAATTTCAGAACCATTTCGGCCGAATTTTTTATTTTTTTTTTGTGAACGTTAGCAATATTTGTACAAAATTTCAGACCAAAATTTTGCCATATCAGCACCCTCCGATACAAATACCGAAATCGAAATATTGAACCCTGGGCACCACAATTTAACAATGCAGGATTTTATTCTTCCTTTCAAATCATAATTATACATAGGAAACCAATATTATTAATTACATATAATTTATCTTGAGCCAACTGCTCATCTCTCAGAAATGAACTAGCCGATGCATGCAGCTCAATATAGGGTCTATTTGGAAGAGTTTCACAATTGCAATTTCTCTCAGAATCAGAAGCTTCCCAAATAGTTTTTTATCTAAATTTTAAAAAGTTATAATTATAAAATGTAGAAAATAAATTAGAAGCTAGAAATTTTAAAAAAAAAAACTCAATTTTTCCATATCCTTAGAAATGACTATCAACCATCCGTTTGCTAGAGTTATAATTTGGTCGTGTCTGCCGATTGCTAGGCTCTATAATTTTGGAATAAAACTTTTATAAATGTGTTCTTAGCGATCAAAAAGCAAATGCTGAAAGATAAACCTCGATAAAAAAACCCCAAAATTAACTTTAAATTTAAGGTTAAAAATTTAAATTTTGGCCAATATACATAAACATAAACGATAAGCGAAAAGATGGGGCTGCTAGTTAATTTGCGAATCTTCTACAGGTGTGCCTCGTGAACATAGGGAAGGGAACGCCGTTCATCTCCGGGCTGGACCTGAGGCCGCTGAAACCGGAGCTGTATCCGGAGGCGACGGCGAACCAGTCGCTGCTTCTGCTCAACCACGACCGCCCGCCGGCGAGGTTCGCCTTCAACCGCTACCAGTTCTGGCGCCCGGCGAGCTACTACAAACTATTCAGGTGAGATCTCCATCGACACAACAGCCACTAATACTACGGTTTTCTGAACGTAGTAGTTTCAGAATCCATGGGTTCTGTGTCAACTCGAACAGCTGCCGACTGAGGCCCTCTCTAGTTTACAGAAATTTTTCCAAACAAATGTCGCATCGAATATTTAGACACATACATAGATTATTAAATATAGATAAATTAAAAAACTAATCACACAGTTTGCATGGAAATGGCGAGACGAATCTTTTGAGTCTAATTAGTCCATGATTAGCTATAAGTGCTACAGTACCCCATATGTGTTAATGATGGATTAATTAGACTCAAAAGATTCGTCTCGCGGTTTCCAGTCAAGTTATGAAATTGATTTTTTCATTTATGTCTAAAAACCCATTTCGACATACAGTCAAACATCCGATGTGACATCTAAAAATTTTCTTTTCGTAAACTAAACAGAATTTCCTGTCCACATTAATGTCAGTTATATTCTAAATCACGATAGGCCGCCGGCCTGAGCTCCCTGAAACACGACCTGATTGACGCATGGCATTTGACCAGCGCAAGCAATGTTAAACAAAGTTATCATCTTAATTAAGCTGTCGTCTGTTTGTACACCTGTCTAAGTTAGTTTAGCCTCTCTTTTTTTCAACTCTTTCGTAATCTTCACAAAATATAATCTTGAATCGATTTTTGCTAAACATCTTGCGACAATTTTTTGCCCGAAATCTCCCATCAAAACTTTTAAATATATCTCTGTTATCAGTAGTTTTAAAACAAATTAAAAAATAAATTACAGGTAAAAATCAAAATCAACTCTAAAATTAAAATTTAGCTATGGTTGATAAACTATGAGAGACATAATACATTTTCATGCCAGTTACAACATATGAGGGATTCAGTTTAGATTCATTGTATTAGTATGTATGGTCATGTTTAGATTCCAACTTTTCCATCACATCAAATTTTTTTACACACAAACTTTCAACTTTTCCTTCACATCGTTTCAATTTCTTCAAATTTTCAATTTTGGTGTGGAACTAAGCACAGCCGTAGTTTATTTCATCACACATCTCTTAATCAGTTCAACCACACATTTTACTCCATTAAAATTCGAAATTTTCTCCATTTAATCAAACCTAATCATTATTAGCTTTTCTTGCAAAATTAATAACATCAACAGGTACCCATTCGATCCGTACGATCGGCTGTGGCAGCCGTACGGCGACGACCCGTCGTGGACGAACATCACCGTCGCCGCCGCCGTCGACGTCACCAACATCAGCCGCTCCGACGACCCCTCCCCGATCCTCCGCAGCGCCGCCACGCCGGCGAACGCCACCGTCCGCCGCCTCGACTTCCCCTGGAGCTCCGACGACGCCGCCACCACCACCTACCTCCTGCTGCTCTACTTCGCCGAGCTGCAGCGGCTGCCGGCCGGCGCAGCGCGGCGGTTCGACGTCCTCGTCGACGGCGACGCCTCCGCCGGCGGCGGGCGGCGAGGGTACACGCCCCGGTACCTCGCGGCGGAGGTCGTGAGGGCGACGGTGCGGGCGGCGCGGCCGGGGCAGCGGCACGTCGTGTCGCTCGTCGCCGCGCCGGACTCCGCGCTGCCGCCCATCGTCAACGGGCTCGAGATCTACTCGGTGCAGCCGATGCCTGAACTCGCGACGAACGACAGAGACGGTATGAGTTTAACCAGATTTAAATTCGTTTGAAAAATAAAATTCGATGAAATTCGTTTGTTTTTTTTTTAAAGGACTACCTATATGTTGATCTTGCGAAGCTTCGAATCTCGCACAGTTTTCAATCAATGGATATAGCCCGTCTTAAATGAAATAACAAAAAAAATGAGCTAAGCATGTAAAAAATTGTAAATATATAGCAAATAAATTTAATTTTAGTGTACTGTAACTGAGTGTAAGTGTTATGTAGCCGGGTGTAAATACATATTAGATTGACAAGAAATACTCTCGGTGCAGCCAACGCCTGAACAAATTCGTTTGAATGCTCAAAATCTTTTTTCAAAGGTTTGGAGAGAATGCTGTTGATCAACTTGCATATAGATCATAACATTGTGTATTTGGTAGGGTGTACAGCATAGTTGCACATCTCTGAATCTTGATGTTTTTTGGCCCCCAAATATTTTATTCAGTTTAAAATCTCGGATTTGAGTTGTTTGTTAGAATGATGGTGAGGTAAAAAGTTCAGAATCTCCTTTTTTTTTCGTATGAACAGCGAAGGCGATGATGGAAATTCGCGATAACTATGAACTGAAGAAGAATTGGATGGGGGATCCATGTGCTCCAAAGGCATTTGCCTGGGTTGGATTGAACTGTAGTTATTCTTCATCTGATCCTGCATTGGTAACAGCTTTGTAAGTAGTCACAAAATTGAGCATTTTAACAGTGCTGTTTTATCAAATGCAGTCGAAAAACTTGTAGTGGTACGAATCTACTTCTAAATGATTTTTTTTCGCAGGAATTTGTCATCAAGCGTGTTGATTGGTCCAGTTAATCTTTCTTTTGGTGATCTGAAGTCCCTGCAATACTTGTGAGTGCAAAATTTGGTAGTTTTTTTTTTCAAAAAAAAAAGGTTATCTGTTCTCACTTCCTGACCGGAAATATCGCCCACTAATTTCACTAGCAAAAACCTGAAGTAGCATGATAGTTAAAATATTTATTGATGTACTAGATCAGCTTTACCTATTGGAGTATTTTCATAATGATTTCAATTTCAGGGATTTGTCCAATAACAGCTTATCTGGCCCAATACCTGATTTTCTAGTGCAAATGCCAGCACTCAAGTTCCTGTAAGTATTCTTCTTAGCCAGAATTCGCTTTACAATAAATTACACCAGTATGTTAAGAATGTACTTGGTTTTTACAGTGATTTGTCAAGCAATAAACTCAGTGGATCGATTCCTTCTGACTTACTTCAAAAGAGAGAAAATGGATCACTTGTATTAAGGTCTGCAACTCTGGATCATCTTGTAAACTCATACCTTGCCAAACATCCCCTGATGGACCTGTGATCTATGTAGTTGTGTTCCTGTTGCCAAAATATCTGTATGGACCTAGAGTTAGAATTTAGAGTCAATCTAGTCTCTAAATTTAACTAATTCAGAATTGTTTCTCTTATGCTAGGATTGGCAACAATGCAAATCTCTGCTATAATGGGGCTAATAATACCTGTGCTCCGGAGAGTAAGCAAAGCAAGAGAATCCTTGTGATTGCAATAGCTGTTCCAATAGTTGCAGCAACTCTGCTGTTTGTGGCAGCAATTGTTATCCTTCACAGGAGGAGGAATAAACAAGGTAATCAATCAACAGTTCATCAAAAGAACAACTGAACCTGCATTTTCTGAAGATTGTTCATATAAGATGACTTTTGATTATTTCAGATACCTGGATCACAAACAATGCAAGACTTATTAGCCCTCACGAAAGGTCGAACGTATTCGAGAACCGGCAATTCACCTACAGGGAATTGAAACTCATGACATCAAACTTCAAAGAGGAAATAGGGAAAGGAGGATTCGGCACTGTCTTCCTAGGATATTTGGAGGATGGAACTCCAGTTGCTGTCAAGATGTGCTCAAAAACATCTTCTGAAGGGGATAAAGAGTTTTTAGCTGAGGTAACCTATCAGGTTGTTCAGTTGAAATTCATCTTTTTACGCGTGCCGGGAATAAATAATTGCCCTTGTTCCATTTTTCAGGCTCAGCACCTGACTAGAGTTCATCACAGAAACCTTGTTTCCTTGATTGGATATTGCAAGGATAAGAAACATCTGGCACTTGTTTATGAGAACATGCAAGGAGGAAACCTGGAGGATCGTTTAAGAGGTAAGCTATTTGGCAACATACTGTTTCACCCATTGCTAAATTTCAGTTTTAAACATTATTCTTTACCAAACATAGTCAGTACATTTGTGTGCTGTTGATTATAACCCTGAATGTGTGCTGTTGTGTTATGCTAATTTCTCAGTTCTGAATGCTGCACTCATGTGTCCACTCTCCAACTATTTTTTAAAAAAGCTTTTTCATATCCATTTATTTTGCATGATTTTCATATCCATCTTAATTTCTTTTTATAATTATTCTGTCACAGGAGAGGCCTCCATTGCTGCACCACTCACCTGGCATCAACGTCTGAAGATCGCTCTCGACTCTGCTCAAGGTATATACAAGACTGCACAGTAATTGCACACACCTGAAAACATGTTCAAAGCCTGACACATTTGACCAAAATTTGGACAAATTTCAACTGTCCATGGATATTGCAGGATTGGAGTACCTGCACAAGTCATGCCAGCCTCCATTGATCCACAGGGACGTCAAGACTCGCAACATCCTCCTCTCCGGCGACCTCGACGCCAAGATCGCCGACTTCGGCCTGACCAAGGTGTTCGCCGGCGACGTCGTGACCCACGTCACCACGCAGCCGGCCGGCACGCTGGGCTACCTCGACCCGGAGTACTACCACACCTCGCGCCTCAGCGAGAAGAGCGACGTCTACAGCTTCGGCGTCGTCCTCCTCGAGCTCGTCACCGGCCGCCCACCGGCCGTCCCCCTCGGCGACGGCGACGGCGGCGGCGGCGAGAGCGTCCACCTCGCCGTGTGGGCGAGGCAGCGGCTGGCCGAGGGCGACATCGAGAGCGTCGCGACGCGGCCATGGGAGGCTGCTTCGAGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035985