BGIOSGA035988

From RiceWiki
Revision as of 08:13, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035988| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035988, complete gene.| tag = OsI_387...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA035988

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035988, complete gene.

LocusTag

OsI_38766

Ensembl Transcript ID

BGIOSGA035988-TA

Ensembl Protein ID

BGIOSGA035988-PA

Length

3823

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:18823181..18827003

Sequence Coding Region

18826806..18827003,18826528..18826691,18825516..18825579,18825323..18825436,18825125..18825169
,18824247..18824482,18824063..18824153,18823732..18823844,18823510..18823633
,18823181..18823363

Genome Context

<gbrowseImage1> name=IndicaChromosome12:18823181..18827003 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:18823181..18827003 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCGCGAGGAGGCCACCACCGCGACGAGGAGGAGGAGGCGGCCGCGGCGCCGCTCCTCGCCGGCGCCGCGCCGTTGGGTTACTCGGGCCACCGCCGTAGCCACGCCGGCGACCTGCACGTCCTCTCCGCCGCGTTCCTCTTCGTCTTCTCCGCCTACTGCGCCGCGCAGAACCTCGAGAGCTCGGTCAACACCGAGGGCGACCTGGGCACGGTGTCCATGGGGATTCTGTACACCTCCTTCACGCTCTTCTCGGTGGCCGCGTCGCCCGTGGTCACGTGGCTCGGCTCCAAGCGCGCGCTCGTCGTCGGCACCAGCGGCTACGTCCTCTTCATCCTCGCCAACCTCGTCCCGACATGGTACACAATGGTGCCAGCCTCCCTGTATCTGGGTTTTACTGCATCAATCATCTGGGTTGGGCAGGGTACATATCTCACGTCTGCTGCCCTCAGTCATGCAAGAGACAATAATTTGCCTGAAGGCCAAACTTTGGGGAACTTCAATGGAGAGTTCTGGGGAATGTTTGCTAGCACACAGGTCATTGGAAATTTGATCTCTCTTGCACTACTGAGAGATGGAAAGGATGGAGGAAGTGTCACGGGGAAAAGTCTGCTGTTTGTTGTGTTTCTTGGCTGCATGATTGTCGGCATTATATTAATGTGTTTACTTTCCAAAAGGGACGAGAAAGGAAATAATGCTCCAACACATTCCTCATTTGGGGCTATGATGAAGTATATTGTTGCCCCTCTCAAGGACCGAAGGATGATTCTTATCATCCCTCTTATTGCATATTCAGGATTACAACAGGCATTTGTATGGGCTGTTTTCACGAAAAATATTGTAACACCTGTGCTTGGCATCTCTGGCGTTGGCGGAGCCATGGCAATATATGGTGCAGCCGATGTTGTTTGTTCATTGGTTGCTGGACGTTTGACCTCTGGGCTTCATTCAGCTACATCTATCGTTTCGGTTGGAGCTATTCTTCAGGCTGTAGTCCTGTTCTGGTTACTTCTTTTTTACAGTCCAATGGGTGGACTGCTTGGTGCAGCAATTCCACTGTTTATAGGTGCCTTATGGGGTGTTGGTGATGGTGTCTTGAATACACAGTTAAGTGCATTACTTGGGCTGCTGTTCGAGGATGTCAAGGAGGCAGCTTTTGCACAGTTGAAGGTTTGGCAATCGGGTGCCATCGCAGTCATCTTCTTCCTGAGCCCAAATATTACGCTACAAGCCATGCTTATCTTGATGGCCACTGCGCTCATCATCTCTTTCGGCGCATTCTTGTTACTTACACTTGTTGTGGAGAAGCCATCGACCGTCAGATCGTGA</cdnaseq>

Protein Sequence

<aaseq>MDARGGHHRDEEEEAAAAPLLAGAAPLGYSGHRRSHAGDLHVLSAAFLFVFSAYCAAQNLESSVNTEGDLGTVSMGILYTSFTLFSVAASPVVTWLGSKRALVVGTSGYVLFILANLVPTWYTMVPASLYLGFTASIIWVGQGTYLTSAALSHARDNNLPEGQTLGNFNGEFWGMFASTQVIGNLISLALLRDGKDGGSVTGKSLLFVVFLGCMIVGIILMCLLSKRDEKGNNAPTHSSFGAMMKYIVAPLKDRRMILIIPLIAYSGLQQAFVWAVFTKNIVTPVLGISGVGGAMAIYGAADVVCSLVAGRLTSGLHSATSIVSVGAILQAVVLFWLLLFYSPMGGLLGAAIPLFIGALWGVGDGVLNTQLSALLGLLFEDVKEAAFAQLKVWQSGAIAVIFFLSPNITLQAMLILMATALIISFGAFLLLTLVVEKPSTVRS</aaseq>

Gene Sequence

<dnaseqindica>1..198#313..476#1425..1488#1568..1681#1835..1879#2522..2757#2851..2941#3160..3272#3371..3494#3641..3823#ATGGACGCGCGAGGAGGCCACCACCGCGACGAGGAGGAGGAGGCGGCCGCGGCGCCGCTCCTCGCCGGCGCCGCGCCGTTGGGTTACTCGGGCCACCGCCGTAGCCACGCCGGCGACCTGCACGTCCTCTCCGCCGCGTTCCTCTTCGTCTTCTCCGCCTACTGCGCCGCGCAGAACCTCGAGAGCTCGGTCAACACCGTGAGTGTGCCATCTCGTCCCTCCTCGGTCCTCGTCCTCGTCCTCCTCGTCGTCGATCGGTCGAGCTGATCTCGATCGCCGCCTTTCCTGATCCGTGGATGATGCTGGCCGCAGGAGGGCGACCTGGGCACGGTGTCCATGGGGATTCTGTACACCTCCTTCACGCTCTTCTCGGTGGCCGCGTCGCCCGTGGTCACGTGGCTCGGCTCCAAGCGCGCGCTCGTCGTCGGCACCAGCGGCTACGTCCTCTTCATCCTCGCCAACCTCGTCCCGACATGGTGCGTGCGGCCGTACGCTCGCCTTCGCCTACGGATCCCATGGTTTTGGGTTTTGACGCCTTCGCCTACGGATCCCATGGTTTTGATTTTTGACATGGTCCGCATGGTATCGCTGGTGCCTAATTGGGCGTGCTGGTTTGGATGCCTCACGCCTGTTTGATGAAATGCCTAGCTAGACCGTGTTGATATGATGCTCCTTTTGCTCAGACACGGGTACTACTGTTGTTAATCGATCATATGGTTTTAATTTGGCGGTGCAGTGTAGCTCGTCTCACCAGTCTACTGTAAGTGTTTGGTTGTGCACGGAATGCATTTTCATTTTCTGATAATTAAATGCTCTGTTACCCTTTTTGGTGTAGCTGAGAGCCCATACAGCAAATTAGTTAAAACAATCGACAAGTTTTTTTTACTATGCTACTACCTCAGTTTTTTAATTGATGACGTAGTTGACTTTTTGTCACACGTTTGATCATTTGTTTTATTCAAAAAATGTTATCTAATTATTTTTTTGTGAATTGTTTTATCACTCAAAGTATTTTAAGCATTATTTATATCTTATACATTTGCATAAAATTTTTGAATAAGATGAATGAATAAACATGTGTTCAAAGTCAACGGCGTCATCTATTAAAAAACGTAGGGAGTATTTACCAGCAACAATGTTTCATTTTCTTCTTTAATATATAGCACTCTCATACAAATATGGATGGCCGATGGATTCTGGCCCTAGTTGATGTGCTTTCTATTATACTATGAAATATTTCAGCTGTGCAAAATACTATTAGAAATGAATCCTTTATGTTTAACATATGCTGAGATTCTATATATGGATGTTAATTTGTGCAACAAATTGTCAGGTACACAAAATACTATTAGAAATGAATCCTTTATGTTTAACATATTCTGAGATTCTATATACGGATTTTAATTTGTGCAACAAATTATCAGGTACACAATGGTGCCAGCCTCCCTGTATCTGGGTTTTACTGCATCAATCATCTGGGTTGGGCAGGTATTTACTTGACAGTGTGCTTGATAAGTCTTCTCTGGTATCCAGTAATCCAGCTCACATAATATATCTCACACTGCAGGGTACATATCTCACGTCTGCTGCCCTCAGTCATGCAAGAGACAATAATTTGCCTGAAGGCCAAACTTTGGGGAACTTCAATGGAGAGTTCTGGGGAATGTTTGCTAGCACACAGGTATGGTTGTACAAAGCTATTCTCCACCAAAACTTGCCAAGACATATTTTAATATCTGTTCTTCATAACTCAAGTGTAGCATCTATTTCTTTCTGCACATGTGGGCTCTACAGATACAAGGTGTCTTTGACTATTTACATTTGAATTATGCAGGTCATTGGAAATTTGATCTCTCTTGCACTACTGAGAGATGGAAAGGTTAGCATCTTAATTTTGATCTTCTCATGTCTTATCAGAATATCCTGGACTGTCATTTGTTATATATTGTGTACCGCTAACTAGTAACTAAAGTGAACTTCATGATACGTACTTTTAGCATCATGATTTGTTGCAGTAAGAGAAAATATAGTTCTGATGTTAACTGGAGAGTCCCATTGTTTCTTTTATTCTATCCTGGAAACTTCTGTTGTACCTCTATACCCAATTCAAAATATGTGTTCTGCTAGGTTTACAAAATTGTCTCAAAATGCATCGATATATTAGTTGTAACAAAATAATGATTGCAAACAAAAATATTGCAGCACACTACAAGAGAACTATAGAATAATTGCAATGAGCACTACTGAAAATAAATCTTAATATTTATCTTTTAGATGTACATTTTAAAATAAATATCTAAAATATTAGCTGTCCTACTCTAATTTCCCATGGACTTAACTATTATAAGATGCCCTGACTCCTGAGGTTAGCAATACTCAAAAGTCTAAACCCCCAAAAGTATTTGTTCAAACTGTTCATCAATATACTAGTTAAAAGTCTGTATGACTTTTGTTAAATTTTGAAACCTTTTATGTTCTTAATAAAAATCATGCTTGATCATGTGATTCCTTGTTACTCCAGGATGGAGGAAGTGTCACGGGGAAAAGTCTGCTGTTTGTTGTGTTTCTTGGCTGCATGATTGTCGGCATTATATTAATGTGTTTACTTTCCAAAAGGGACGAGAAAGGAAATAATGCTCCAACACATTCCTCATTTGGGGCTATGATGAAGTATATTGTTGCCCCTCTCAAGGACCGAAGGATGATTCTTATCATCCCTCTTATTGCATATTCAGGATTACAACAGGCATTTGTATGGTAAGTACTTTGTAGCGCATATTGCCTTTCGACATTTGTTGCTGTTTGATTTCTTATTATGTGCTCTGTAAGATAATGCTGTGTAATTTTTAGGGCTGTTTTCACGAAAAATATTGTAACACCTGTGCTTGGCATCTCTGGCGTTGGCGGAGCCATGGCAATATATGGTGCAGCCGATGTTGTTGTAAGTTTAAATCACTAAAGTTGTTAGCATAGCCTGATGCCATTTCACTATGAACTCTCTATTATCCTTTCCCTAGGGCCCTACTGTTGCTATTGCTTTGTGAAAGTATGGCATATCTTGTTTCCCAGTTATCTATAACTAATCTATATCATGCTAAACTATTGAAAATGCCATAATTTATGTTTTAGCTGACTTTTGATGGTTACCTGACACTGCAGTGTTCATTGGTTGCTGGACGTTTGACCTCTGGGCTTCATTCAGCTACATCTATCGTTTCGGTTGGAGCTATTCTTCAGGCTGTAGTCCTGTTCTGGTTACTTCTTTTTTACAGGTTTGGTTTCGTTAATCGTCACTGTGCTGTTACACCTTTCTTCTGCAGTTATGCTTGCCATTGGTATCACAGTGAGCTCATCTTTCTATTGCCTACAGTCCAATGGGTGGACTGCTTGGTGCAGCAATTCCACTGTTTATAGGTGCCTTATGGGGTGTTGGTGATGGTGTCTTGAATACACAGTTAAGTGCATTACTTGGGCTGCTGTTCGAGGATGTCAAGGTAATATCGTTTTAGTTTTCTTTAGCTTTTCATCAGCACGGTAGCGTTCTTCCTATCGATGACGGAAAAATATAATATATGGCATTTCATTTGCTGATACTTAAATGGATACTGAAATGATTATTTTGGAAAAATGTCAAATGCAGGAGGCAGCTTTTGCACAGTTGAAGGTTTGGCAATCGGGTGCCATCGCAGTCATCTTCTTCCTGAGCCCAAATATTACGCTACAAGCCATGCTTATCTTGATGGCCACTGCGCTCATCATCTCTTTCGGCGCATTCTTGTTACTTACACTTGTTGTGGAGAAGCCATCGACCGTCAGATCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035988