BGIOSGA036006

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Revision as of 08:14, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036006| Description = BGIOSGA036006| Definition = Oryza sativa Indica Group BGIOSGA036006, complete gene.| tag = | tid = BGIOSGA036006-TA|...")
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Gene Name

BGIOSGA036006

Description

BGIOSGA036006

Definition

Oryza sativa Indica Group BGIOSGA036006, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA036006-TA

Ensembl Protein ID

BGIOSGA036006-PA

Length

3351

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:18480948..18484298

Sequence Coding Region

18484023..18484298,18483032..18483163,18480948..18481433

Genome Context

<gbrowseImage1> name=IndicaChromosome12:18480948..18484298 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:18480948..18484298 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACAAGCCATCCATGTGCCACAAGACCAAGCAAGGGCAGCATCAGCAAGAAAAACAAGAACATGGCTCTCAATCTCAATGACAGCACCACCGCCATCGCCATGGCGAAGAGCGAGGTCTCGATAAGGGAGTATGACCGGGAACGCGACATGGAGGCCATCGAAAAGCTCGAGAGGAGCTGCGAAATCGGCGCGGGGAAGGGTTTCTCCATTGTCACCAACATGATGGGTGATCCCTTGTGCAGGATCAGGCTCTTCCAGCTCCATGTCATGATGGTAGCTGAGCTCACAGGGGGAGGAGGGGAGCTCGTCGGCGTGGCGCGAGGCTGCGTCAAGCGCGTCGCCACCGGCGTCGTCGACGGCGACACCGTGCTCGCCGGCTACGTCCTCGGCCTCCGGGTGTCTCCGGTAGCTGAGCTCACAGGGGGAGGAGGGGAGCTCGTCGGCGTGGCGCGAGGCTGCGTCAAGCGCGTCGCCACCGGCGCCGTCGACGGCGACACCGTGCTCGCCGGCTACGTCCTCGGCCTCCGGGTGTCTCCGGTGCACAGGCGGAAGGGCATCGGCTTGAAGCTGGTCGAGTCCGTCGAGGCGTGGGCGGCGCGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGTGGGCGCCGAGGGCAAGGCGCTGGTGTTCGAGGCCGCCGCCGGCGACCCCGTCGCCCGCCACGTGCCGCGCGGCCGGCTCGCGTCGCGCGTCGACGACGTGTGGCTGGTGAAGCCCGGCGGCGGCGCCGCCGCGCTGCCGGCGGGGGCGGCGAGGCGACGGTTCGTCGATCCCAGAGACTTCTAG</cdnaseq>

Protein Sequence

<aaseq>MTSHPCATRPSKGSISKKNKNMALNLNDSTTAIAMAKSEVSIREYDRERDMEAIEKLERSCEIGAGKGFSIVTNMMGDPLCRIRLFQLHVMMVAELTGGGGELVGVARGCVKRVATGVVDGDTVLAGYVLGLRVSPVAELTGGGGELVGVARGCVKRVATGAVDGDTVLAGYVLGLRVSPVHRRKGIGLKLVESVEAWAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGAEGKALVFEAAAGDPVARHVPRGRLASRVDDVWLVKPGGGAAALPAGAARRRFVDPRDF</aaseq>

Gene Sequence

<dnaseqindica>1..276#1136..1267#2866..3351#ATGACAAGCCATCCATGTGCCACAAGACCAAGCAAGGGCAGCATCAGCAAGAAAAACAAGAACATGGCTCTCAATCTCAATGACAGCACCACCGCCATCGCCATGGCGAAGAGCGAGGTCTCGATAAGGGAGTATGACCGGGAACGCGACATGGAGGCCATCGAAAAGCTCGAGAGGAGCTGCGAAATCGGCGCGGGGAAGGGTTTCTCCATTGTCACCAACATGATGGGTGATCCCTTGTGCAGGATCAGGCTCTTCCAGCTCCATGTCATGATGGTATGTTTCTAGACCATATATATATATATATAGACATGGGTTAACAATGTGATTTTTGTGTGTTTGCTTCATGTACCTAGCTAGCTAAAGCTAGATCTTTGACATCATAAGCTTGACATGATCATAAGCTAGCTATGATATGATACCTCTTGTCTACAATTCTATAACTGCCCTAAAGAGTGGTCTTCATAAGCTAGGAGTTACCTTTTCACTTTAGGCTTTACATGCCCCCAAATATGGAAATGGAATGTTTGTTTCACCTCACTGGCTACTTGCTAATTGCACAGTTACCCTAAGTATATAGCCAATCTTGCAAAGGCTAGTCATATGAATTAGGTTCAGACTTACATGCTACCATCTCTGTTCTTTTCTACTTGACTTTTTTAAACTTTGACATAGTCTTCAATGTCGCAAGTGTCCGACCGTTACATTTCTGACAATATGTTTACATAAATTAATAAAAATATAGTTACATGAAAGGATTTCTCATGATAAAGTCCCATTTGTAAATATTAAATCATAACATTTTTATTGTATCGATGATTTAATATATCGAGGTTTGACTCTATTTATTTTAGGACGTTATATATTTGAGTTTTTTTTTAAAAAAATCTATTTGAGAATAGAGATACTTTCAATCAAGTGAGTCTTTGATCTTAATTAGGGATTCCAACTAGGTTTGACCATGCTTAGAAGCTAATAGGCTCATATGAATTCATATGCATGCGTGTTCATAACTTGTAGCAATTAATTCTCTAGTTCTCTAGGCTAAAACATTCAAATCTGTACAACAATTAGTGAACATTTATTCAAATTTGTCTGAAATTTTCATTATAAATTCTGGCCCTTTCATAAGTAGGTAGCTGAGCTCACAGGGGGAGGAGGGGAGCTCGTCGGCGTGGCGCGAGGCTGCGTCAAGCGCGTCGCCACCGGCGTCGTCGACGGCGACACCGTGCTCGCCGGCTACGTCCTCGGCCTCCGGGTGTCTCCGGTGCACAGGCGGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAATTGCACAGTTACCCTAAGTATATAGCCAATCTTGCAAAGGCTAGTCATATGAATTAGGTTCAGACTTACATGCTACCATCTCTGTTCTTTTCTACTTGACTTTTTTAAACTTGACATAGTCTTCAATGTCGCAAGTATCCGACCGTTACATTTCTGACAATATGTTTACATAAATTAATAAAAATATAGTTACATGAAATGATTTCTCATGATAAAGTCCCATTTGTAAATATTAAATCATAACATTTTTATTGTATCGATGATTTAATATATCGAGGTTTGACTCTATTTATTTTAGGACGTTATATATTTGAGTTTTTTTTTAAAAAAATCTATTTGAGAATAGAGATACTTTCAATCAAGTGAGTCTTTGATCTTAATTAGGGATTCCAACTAGGTTTGACCATGCTTAGAAGCTAATAGGCTCATATGAATTCATATGCATGCGTGTTCATAACTTGTAGCAATTAATTCTCTAGTTCTCTAGGCTAAAACATTCAAATCTGTACAACAATTAGTGAACATTTATTCAAATTTGTCTGAAATTTTCATTATAAATTCTGGCCCTTTCATAAGTAGGTAGCTGAGCTCACAGGGGGAGGAGGGGAGCTCGTCGGCGTGGCGCGAGGCTGCGTCAAGCGCGTCGCCACCGGCGCCGTCGACGGCGACACCGTGCTCGCCGGCTACGTCCTCGGCCTCCGGGTGTCTCCGGTGCACAGGCGGAAGGGCATCGGCTTGAAGCTGGTCGAGTCCGTCGAGGCGTGGGCGGCGCGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGTGGGCGCCGAGGGCAAGGCGCTGGTGTTCGAGGCCGCCGCCGGCGACCCCGTCGCCCGCCACGTGCCGCGCGGCCGGCTCGCGTCGCGCGTCGACGACGTGTGGCTGGTGAAGCCCGGCGGCGGCGCCGCCGCGCTGCCGGCGGGGGCGGCGAGGCGACGGTTCGTCGATCCCAGAGACTTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036006