BGIOSGA036024

From RiceWiki
Revision as of 08:14, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036024| Description = BGIOSGA036024| Definition = Oryza sativa Indica Group BGIOSGA036024, complete gene.| tag = | tid = BGIOSGA036024-TA|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036024

Description

BGIOSGA036024

Definition

Oryza sativa Indica Group BGIOSGA036024, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA036024-TA

Ensembl Protein ID

BGIOSGA036024-PA

Length

3432

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:18133191..18136622

Sequence Coding Region

18135643..18136622,18134469..18135390,18133667..18134401,18133191..18133481

Genome Context

<gbrowseImage1> name=IndicaChromosome12:18133191..18136622 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:18133191..18136622 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCGGCGGCTGTCGTTGCCGGCGGGGGCGCCGGTGACGGTGGCGGTGTCGCCGGTGCGGAGCCCGGGGGGTGACGCGGTGGTGAGGAGGGGGAGCGGGCTGACGTCCCCCGTGCCGAGGCACTCGCTCGGGTCGTCCACCGCCACGCTGCAGGTGTCGCCGGTGAGGCGGAGCGGCGGGAGTAGGTACCTCGGCGCGTCGAGGGATGGCGGCGCCGATGAGAGCGCCGAGTTCGTGCACTACACCGTGCACATCCCGCCCACGCCCGACCGGGCGACGGCGTCCGTGGCGAGCGAGGCGGAGGCGGCGGCGGAGGCCGAGGAGCTGCACCGGCCGCAGCGGAGCTACATCTCCGGGACGATATTCACCGGGGGGCTCAACTGCGCCACGCGCGGCCACGTGCTCAACTTCTCCGGCGAGGGCGGCGCCACCGCCGCCTCCAGGGCGGCGGCGTCGGGGAACATGTCGTGCAAGATGCGCGGGTGCGACATGCCCGCGTTCCTCAACGGCGGCCGCCCGCCGTGCGACTGCGGGTTCATGATCTGCAAGGAGTGCTACGCGGAGTGCGCCGCGGGCAACTGCCCCGGTTGCAAGGAGGCCTTCTCCGCGGGCTCCGACACCGACGAATCCGACAACGTCACCGACGACGACGACGACGAGGCCGTCTCCTCCTCCGAGGAGAGGGACCAGCTGCCGCTGACATCCATGGCGAGGAAATTTTCCGTGGTGCACTCCATGAAGGTCCCCGGCGCCGCCGCCAACGGCAACGGCAAGCCGGCCGAGTTCGACCACGCCCGCTGGCTCTTCGAGACCAAGGGCACCTATGGCTACGGCAACGCTCTCTGGCCCAAGGACGGCCATGCCCATAGCGGCGCCGGCTTCGTCGCCGCCGACGAGCCCCCCAACTTCGGCGCCCGCTGCCGCCGCCCCCTCACCAGAAAAACCAGCGTCTCCCAAGCCATTCTCAGCCCCTACAGGTTGTTGATTGCGATTCGGCTGGTGGCGCTGGGGTTCTTCCTCGCGTGGAGGATTCGGCATCCGAATCCGGAGGCGGTGTGGCTGTGGGCGATGTCGGTGGCGTGCGAGGTGTGGTTCGCCTTCTCATGGCTGCTCGACAGCCTCCCCAAGCTCTGCCCCGTCCACCGCGCCGCCGACCTCGCCGTCCTCGCCGAGCGGTTCGAGTCGCCGACGGCGCGCAACCCCAAGGGCCGCTCCGACCTCCCCGGGATCGACGTGTTCGTCACCAGCGCCGACCCGGAGAAGGAGCCGCCGCTGGTCACCGCCAACACCATCCTCTCCATCCTCGCCGCGGACTACCCCGTCGAGAAGCTCGCTTGCTACCTCTCCGACGACGGCGGCGCGCTGCTGTCGTTCGAGGCGCTCGCCGAGACGGCCAGCTTCGCGCGCACGTGGGTGCCATTCTGCCGCAAGCACGGCGTCGAGCCGCGGTGCCCCGAGGCGTATTTCGGCCAGAAGAGGGACTTCCTCAAGAACAAGGTGCGCGTCGACTTCGTCCGCGAGAGGCGGAAGGTGAAGCGCGAGTACGACGAGTTCAAGGTGCGGGTGAACTCGCTCCCCGAGGCGATCCGGCGGCGCTCCGACGCGTACAACGCCGGCGAGGAGCTGCGCGCCAGGAGGCGGCAGCAGGAGGAGGCCGCCGCCGCGGCTGCCGCCGGCAACGGCGAGCTTGGAGCGGCGGCGGTCGAGACCGCCGCCGTGAAGGCCACGTGGATGTCGGACGGCTCGCACTGGCCGGGGACGTGGACGTGCCCCGCGGCGGACCACGCCCGCGGCGACCATCGCCGGGATCATCCAGGCGATGCTGGCGCCGCCGACCTCGGAGCCGGTGATGGGAGGCGAGCGGCGGAGTGCGGCGGGCTGATCGACACTCCCGGGTGTAAGCCCGGCGCCATGAACGCGTTGGTGCGGACGCGCTCCATCATGTCGAACGGGCCCTTCATCCTCTACCTCGACTGCGACCACTACGTGCACCACTCGTCGGCGCTCCGGGAGGGGATGTGCTTCATGCTCGACCGCGNCGGCGACCGCGTGTGCTTCGTCCAGTTCCCGCAGCGGTTCGAGGGCGTCGACCCCAGCGACCGGTACGCCAACCACAACCTCGTCTTCTTCGACGTGTCCATGCGCGCCATGGACGGGCTTCAGGGCCCCATGTACGTCGGCACCGGCTGCGTCTTCCGCCGCACCGCGCTGTACGGCTTCAGCCCGCCCCGCGCCACCGAGCACCATGGCTGGCTCGGCCGCAGGAAGATCAAGCTGTTCCTCACCAAGAAGAAGAGCATGGGCAAGAAGACGGACAGGGCCGAGGACGACACCGAGATGATGCTGCCGCCGATCGAGGACGACGACGGCGGCGCCGACATTGAGGCCTCGGCTATGCTACCGAAGCGGTTCGGCGGGTCGGCGACGTTCGTGGCGTCGATACCCGTGGCGGAGTACCAGGGTCGGCTGCTGCAGGACACCCCCGGGTGCCACCACGGCCGCCCTGCGGGCGCGCTCGCTGTGCCGCGCGAGCCGCTCGACGCGGCGACGGTGGCGGAGGCCATCGGCGTGATCTCCTGCTTCTACGAGGAGAAGACGGAGTGGGGGCGGCGCATCGGGTGGATCTACGGCTCCAATAATTCTTCTCACATGCGACCACGCCACAGTAACATGACCACAATATTTTTAGGCGTACTCAGCAGGGTGAGCGACGAGGTACGCCTCGATCATCTGGAGCATGCTGAAGTAGCCGTCGACGATCATCTTCTCCTGCTCCGGCGACAGCGAGGCGCCGTCTTCGAGCTCGTACTCCACCGTGAGCTTGGCCACGCAGGTGGCGTCGCCGGTGGCCTCGAGCTTCGTCTCCGTCGAGTGCGACTTGAGGTTGCCCACCCTGCTCTTAACCTCCAACACCTCAACCTTTAG</cdnaseq>

Protein Sequence

<aaseq>MSRRLSLPAGAPVTVAVSPVRSPGGDAVVRRGSGLTSPVPRHSLGSSTATLQVSPVRRSGGSRYLGASRDGGADESAEFVHYTVHIPPTPDRATASVASEAEAAAEAEELHRPQRSYISGTIFTGGLNCATRGHVLNFSGEGGATAASRAAASGNMSCKMRGCDMPAFLNGGRPPCDCGFMICKECYAECAAGNCPGCKEAFSAGSDTDESDNVTDDDDDEAVSSSEERDQLPLTSMARKFSVVHSMKVPGAAANGNGKPAEFDHARWLFETKGTYGYGNALWPKDGHAHSGAGFVAADEPPNFGARCRRPLTRKTSVSQAILSPYRLLIAIRLVALGFFLAWRIRHPNPEAVWLWAMSVACEVWFAFSWLLDSLPKLCPVHRAADLAVLAERFESPTARNPKGRSDLPGIDVFVTSADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLSFEALAETASFARTWVPFCRKHGVEPRCPEAYFGQKRDFLKNKVRVDFVRERRKVKREYDEFKVRVNSLPEAIRRRSDAYNAGEELRARRRQQEEAAAAAAAGNGELGAAAVETAAVKATWMSDGSHWPGTWTCPAADHARGDHRRDHPGDAGAADLGAGDGRRAAECGGLIDTPGCKPGAMNALVRTRSIMSNGPFILYLDCDHYVHHSSALREGMCFMLDRXGDRVCFVQFPQRFEGVDPSDRYANHNLVFFDVSMRAMDGLQGPMYVGTGCVFRRTALYGFSPPRATEHHGWLGRRKIKLFLTKKKSMGKKTDRAEDDTEMMLPPIEDDDGGADIEASAMLPKRFGGSATFVASIPVAEYQGRLLQDTPGCHHGRPAGALAVPREPLDAATVAEAIGVISCFYEEKTEWGRRIGWIYGSNNSSHMRPRHSNMTTIFLGVLSRVSDEVRLDHLEHAEVAVDDHLLLLRRQRGAVFELVLHRELGHAGGVAGGLELRLRRVRLEVAHPALNLQHLNL</aaseq>

Gene Sequence

<dnaseqindica>1..980#1233..2154#2222..2956#3142..3432#ATGTCGCGGCGGCTGTCGTTGCCGGCGGGGGCGCCGGTGACGGTGGCGGTGTCGCCGGTGCGGAGCCCGGGGGGTGACGCGGTGGTGAGGAGGGGGAGCGGGCTGACGTCCCCCGTGCCGAGGCACTCGCTCGGGTCGTCCACCGCCACGCTGCAGGTGTCGCCGGTGAGGCGGAGCGGCGGGAGTAGGTACCTCGGCGCGTCGAGGGATGGCGGCGCCGATGAGAGCGCCGAGTTCGTGCACTACACCGTGCACATCCCGCCCACGCCCGACCGGGCGACGGCGTCCGTGGCGAGCGAGGCGGAGGCGGCGGCGGAGGCCGAGGAGCTGCACCGGCCGCAGCGGAGCTACATCTCCGGGACGATATTCACCGGGGGGCTCAACTGCGCCACGCGCGGCCACGTGCTCAACTTCTCCGGCGAGGGCGGCGCCACCGCCGCCTCCAGGGCGGCGGCGTCGGGGAACATGTCGTGCAAGATGCGCGGGTGCGACATGCCCGCGTTCCTCAACGGCGGCCGCCCGCCGTGCGACTGCGGGTTCATGATCTGCAAGGAGTGCTACGCGGAGTGCGCCGCGGGCAACTGCCCCGGTTGCAAGGAGGCCTTCTCCGCGGGCTCCGACACCGACGAATCCGACAACGTCACCGACGACGACGACGACGAGGCCGTCTCCTCCTCCGAGGAGAGGGACCAGCTGCCGCTGACATCCATGGCGAGGAAATTTTCCGTGGTGCACTCCATGAAGGTCCCCGGCGCCGCCGCCAACGGCAACGGCAAGCCGGCCGAGTTCGACCACGCCCGCTGGCTCTTCGAGACCAAGGGCACCTATGGCTACGGCAACGCTCTCTGGCCCAAGGACGGCCATGCCCATAGCGGCGCCGGCTTCGTCGCCGCCGACGAGCCCCCCAACTTCGGCGCCCGCTGCCGCCGCCCCCTCACCAGAAAAACCAGCGTCTCCCAAGCCATTCTCAGCCCCTACAGGTACCAAATCCTCCTCAAAATTTGAACAATTTCAACAAATTTTACCAAATTTGAGCAAATTGGTTAGCATTTTGAGGTGGATTTGTTTTTGATTAGGTTGAATTTTGAACAATTTCAACAAAATTTACCAAGTTGGTTAGCATTTTGAGGTGGATTTGTTTTTGATTAGGTTGAATTTTGAACAATTTCAACAAATTTTACCAAATTTGAGCAAATTGGTTAGCATTTTGAGGTGGATTTGTTTTTGATTAGGTTGTTGATTGCGATTCGGCTGGTGGCGCTGGGGTTCTTCCTCGCGTGGAGGATTCGGCATCCGAATCCGGAGGCGGTGTGGCTGTGGGCGATGTCGGTGGCGTGCGAGGTGTGGTTCGCCTTCTCATGGCTGCTCGACAGCCTCCCCAAGCTCTGCCCCGTCCACCGCGCCGCCGACCTCGCCGTCCTCGCCGAGCGGTTCGAGTCGCCGACGGCGCGCAACCCCAAGGGCCGCTCCGACCTCCCCGGGATCGACGTGTTCGTCACCAGCGCCGACCCGGAGAAGGAGCCGCCGCTGGTCACCGCCAACACCATCCTCTCCATCCTCGCCGCGGACTACCCCGTCGAGAAGCTCGCTTGCTACCTCTCCGACGACGGCGGCGCGCTGCTGTCGTTCGAGGCGCTCGCCGAGACGGCCAGCTTCGCGCGCACGTGGGTGCCATTCTGCCGCAAGCACGGCGTCGAGCCGCGGTGCCCCGAGGCGTATTTCGGCCAGAAGAGGGACTTCCTCAAGAACAAGGTGCGCGTCGACTTCGTCCGCGAGAGGCGGAAGGTGAAGCGCGAGTACGACGAGTTCAAGGTGCGGGTGAACTCGCTCCCCGAGGCGATCCGGCGGCGCTCCGACGCGTACAACGCCGGCGAGGAGCTGCGCGCCAGGAGGCGGCAGCAGGAGGAGGCCGCCGCCGCGGCTGCCGCCGGCAACGGCGAGCTTGGAGCGGCGGCGGTCGAGACCGCCGCCGTGAAGGCCACGTGGATGTCGGACGGCTCGCACTGGCCGGGGACGTGGACGTGCCCCGCGGCGGACCACGCCCGCGGCGACCATCGCCGGGATCATCCAGGCGATGCTGGCGCCGCCGACCTCGGAGCCGGTGATGGGAGGCGAGCGGCGGAGTGCGGCGGGCTGATCGACACTCCCGGGTGTGTACGTCCGCCTCCCGATGATGGTGTACGTGTCTCGGGAGCAGCGCCCGGGCTACGATCACAACTAGAAGCCCGGCGCCATGAACGCGTTGGTGCGGACGCGCTCCATCATGTCGAACGGGCCCTTCATCCTCTACCTCGACTGCGACCACTACGTGCACCACTCGTCGGCGCTCCGGGAGGGGATGTGCTTCATGCTCGACCGCGNCGGCGACCGCGTGTGCTTCGTCCAGTTCCCGCAGCGGTTCGAGGGCGTCGACCCCAGCGACCGGTACGCCAACCACAACCTCGTCTTCTTCGACGTGTCCATGCGCGCCATGGACGGGCTTCAGGGCCCCATGTACGTCGGCACCGGCTGCGTCTTCCGCCGCACCGCGCTGTACGGCTTCAGCCCGCCCCGCGCCACCGAGCACCATGGCTGGCTCGGCCGCAGGAAGATCAAGCTGTTCCTCACCAAGAAGAAGAGCATGGGCAAGAAGACGGACAGGGCCGAGGACGACACCGAGATGATGCTGCCGCCGATCGAGGACGACGACGGCGGCGCCGACATTGAGGCCTCGGCTATGCTACCGAAGCGGTTCGGCGGGTCGGCGACGTTCGTGGCGTCGATACCCGTGGCGGAGTACCAGGGTCGGCTGCTGCAGGACACCCCCGGGTGCCACCACGGCCGCCCTGCGGGCGCGCTCGCTGTGCCGCGCGAGCCGCTCGACGCGGCGACGGTGGCGGAGGCCATCGGCGTGATCTCCTGCTTCTACGAGGAGAAGACGGAGTGGGGGCGGCGCATCGGGTGGATCTACGGCTCCGTCACCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACTTGTACACTGATCCACAATCTTCCATATATATTAACCATCATACACAACACATTCTTATGTGTATTTTATTCACTCGTGAAGCAAAAACACAATACTGAAATTATTACATAACCTTAAACACAGAATAATTCTTCTCACATGCGACCACGCCACAGTAACATGACCACAATATTTTTAGGCGTACTCAGCAGGGTGAGCGACGAGGTACGCCTCGATCATCTGGAGCATGCTGAAGTAGCCGTCGACGATCATCTTCTCCTGCTCCGGCGACAGCGAGGCGCCGTCTTCGAGCTCGTACTCCACCGTGAGCTTGGCCACGCAGGTGGCGTCGCCGGTGGCCTCGAGCTTCGTCTCCGTCGAGTGCGACTTGAGGTTGCCCACCCTGCTCTTAACCTCCAACACCTCAACCTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036024