Os12g0167900

From RiceWiki
Revision as of 10:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0167900| Description = 60S ribosomal protein L3| Version = NM_001072782.1 GI:115487525 GeneID:4351604| Length = 2544 bp| Definition = Oryz...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0167900

Description

60S ribosomal protein L3

Version

NM_001072782.1 GI:115487525 GeneID:4351604

Length

2544 bp

Definition

Oryza sativa Japonica Group Os12g0167900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3428274..3430817

Sequence Coding Region

3428553..3428637,3429243..3429353,3429435..3429739,3429822..3430231,3430324..3430582

Expression

GEO Profiles:Os12g0167900

Genome Context

<gbrowseImage1> name=NC_008405:3428274..3430817 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3428274..3430817 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgcacaggaagttcgagcacccgaggcatggatccctcggcttcctcccgaggaagcgctcctcccgccaccgcggcaaggtgaagtccttccccaaggatgacgtatcaaagccctgccaccttacttccttcgttggctacaaggctggaatgacacacattgtgcgtgaggtcgagaagcctggctccaagctccacaagaaggaaacctgcgaggctgttaccatcatcgagacccctccgcttgtcattgttggactcgtggcctatgtcaagacacctcgtggacttcgctctctcaactctgtctgggcccagcaccttagcgaggaggtgcggagaaggttctacaagaactggtgcaaaagcaagaagaaggctttcactaagtatgcccttaagtatgacagtgatgctggcaagaaagaaatccagatgcaacttgagaagatgaagaagtacgcatctattgttcgtgttattgcccacactcagatcagaaagatgaagggcttgaagcagaagaaggctcacctcatggagatccagatcaacggtggcactatcgccgacaaggtggactatggctacaagttctttgagaaggaaatccctgttgatgcagtcttccagaaggacgagatgattgacatcattggtgtcactaagggtaagggttatgaaggtgtcgtcactcgttggggtgtcacccgccttcctcgcaagacccacaggggtctccgcaaggttgcttgtattggtgcctggcatccagccagggtgtcctacactgttgcccgtgctggtcagaacggataccaccaccgcactgagatgaacaagaaggtttacaagattggcaagtctggtcaggagtctcatgcggcctgcaccgagttcgacaggactgagaaggacatcaccccgatgggcggcttcccgcactacggtgtggtgaagggcgactacctcatgatcaagggttgctgcgtcggtccgaagaagagagtcgtcaccctccgccagtcgctgctgaagcagacctcgcggctcgccctggaggagatcaagctcaagttcatcgacacctcgtccaagttcgggcacggtcgcttccagaccaccgacgagaagcagaggttcttcggcaagctcaaggcctag</cdnaseq>

Protein Sequence

<aaseq>MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLT SFVGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSL NSVWAQHLSEEVRRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIV RVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMI DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYH HRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG PKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLKA</aaseq>

Gene Sequence

<dnaseqindica>280..364#970..1080#1162..1466#1549..1958#2051..2309#tctgcactcagctcgcgccgccgccgccgtcgccgtcactctcctcaggtaagctcctcccctcctcatcctccaatccccgcttcgattcagattttgcctccgctccgtgtccgcaatccgccattagttgttagtgagctagctgggagatcgaattctcgtcgctggtgctgtagtttgatcgctgtggcttgcgattggtgattttacgggcattttcttggttgcggatctcatggcttgtgtgggtttcgtttgcaggtaaggaggaggaagatgtcgcacaggaagttcgagcacccgaggcatggatccctcggcttcctcccgaggaagcgctcctcccgccaccgcggcaagggtacgtgaatcctttgccttccacacgcttgattggtgatgcatgaattgcgagtttcactgtccgtattgatctgaagacggatttcgtttatgcccagcgagttgattgcgagtttcactgtccgtattgatctgacgagggatttcgttatgctctgcgaatcataatctagtgcggcatgatgtagtaatccatattgtgcagctaatagattcagctatctaagtgtgtacgcgtgatatggttcgtatgttttctgttaggtagatacaggtgtttcttattagagtattttcgcaatcatttggatgttcgtttggctatgtgttcctaaatatagcgctttattttctaatccttttggtatatatgctgctaacatacctagattgacacatgctcatagattttttgttttattgatgtggtacataaatagttaagaatgcacctgtctttaaaatgtctgtacatggatgtaacccaacttaaaatttcaggacataggcataacccaatgggatatatattgcttctgtggaacttggagaatttagttactattcagttgtacgctgacactagatcctatgtttttgcagtgaagtccttccccaaggatgacgtatcaaagccctgccaccttacttccttcgttggctacaaggctggaatgacacacattgtgcgtgaggtcgagaagcctggctccagtaagttgctctgcatcttgcattcgtgttcattggaggtatgccttgaacatattaacaccatatgttgacaatgtgcagagctccacaagaaggaaacctgcgaggctgttaccatcatcgagacccctccgcttgtcattgttggactcgtggcctatgtcaagacacctcgtggacttcgctctctcaactctgtctgggcccagcaccttagcgaggaggtgcggagaaggttctacaagaactggtgcaaaagcaagaagaaggctttcactaagtatgcccttaagtatgacagtgatgctggcaagaaagaaatccagatgcaacttgagaagatgaagaagtacgcatctattgttcgtgttattgcccacactcaggtgagattgccattgcctcttgtactcttctgaattctgaagagttatcatgttttgctgaccatttcttgtcaaaattcagatcagaaagatgaagggcttgaagcagaagaaggctcacctcatggagatccagatcaacggtggcactatcgccgacaaggtggactatggctacaagttctttgagaaggaaatccctgttgatgcagtcttccagaaggacgagatgattgacatcattggtgtcactaagggtaagggttatgaaggtgtcgtcactcgttggggtgtcacccgccttcctcgcaagacccacaggggtctccgcaaggttgcttgtattggtgcctggcatccagccagggtgtcctacactgttgcccgtgctggtcagaacggataccaccaccgcactgagatgaacaagaaggtttacaagattggcaagtctggtcaggagtctcatgcggcctgcaccgagttcgacaggtatacatctttagaacgtttgaaggccttgagtaatgttatgtgcattccattctaaggttgtgatgacatctgacctttctcccttgcaggactgagaaggacatcaccccgatgggcggcttcccgcactacggtgtggtgaagggcgactacctcatgatcaagggttgctgcgtcggtccgaagaagagagtcgtcaccctccgccagtcgctgctgaagcagacctcgcggctcgccctggaggagatcaagctcaagttcatcgacacctcgtccaagttcgggcacggtcgcttccagaccaccgacgagaagcagaggttcttcggcaagctcaaggcctaggccatcagaattcaatcgaacctcacctgatagctttcccagtttctgtacttgtcctgagttttgtggcagatattttgagtacccagtttaaatgctttgctactctgagctgctggtgctgcggatgatcaaactgttgagatttatgaattttgaactcgatagttatgttttttcgcctgccttgcatctttcagctaccaattggttgaatcaaatttgaaatttgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0167900, RefSeq:Os12g0167900