BGIOSGA036036

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Revision as of 08:14, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036036| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036036, complete gene.| tag = OsI_386...")
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Gene Name

BGIOSGA036036

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036036, complete gene.

LocusTag

OsI_38660

Ensembl Transcript ID

BGIOSGA036036-TA

Ensembl Protein ID

BGIOSGA036036-PA

Length

6352

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:17868035..17874386

Sequence Coding Region

17874166..17874386,17868806..17870444,17868035..17868634

Genome Context

<gbrowseImage1> name=IndicaChromosome12:17868035..17874386 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:17868035..17874386 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTATGGGCTTTATGGGCTTGATCACTCTGAGTGGCTGGAAGTTGAATATATCAACCACCATGCTCTGTTTGTAGGGTACCTGTCGATGGCCGTCAAAGGGGTGGGCTTCTTGGTGGGTTTATGGACCACCGTTGTTCTTCTTGGTGGCTTCGTCTCTATGCTTGAGAAGAAGGATTTCTGGAGTCTCACCATCATCACACTCGTCCAAACAGCAGGGGTGTTCGATGTTCTCCTGAACGAAAAGCTGCGCCATGCTGTGAATTCAGTCGATGGCTTCTTGGTTACTATGGACATGGTGTTCAGGTGCGAAGACGACGAGTTCGACTCGGGCATCCAGTTGTGGCGTTCACTAGCAGGACGTCTTGTGACGTTCATCCAGGCGGTGGTGTTCGCCATCATACTGTGCCCTCTGGCTGTGCTCTACCTGTTTGGGCTGGTCATCAGCACCAGTCTATCGCTGTGGCGCCTCATACAGCACGACTACGGCGACGGCGACGGCAGCGCCAACCTGACTCCGGCGCTCAATGTGCTCTACTCACTGGCACTCTTCCAGGGCGTCCTCTTCTTCTACCAGTGGGTGTCCAACTTCGCTGGGAAAAGGTTGATCGAAAAGGTGGCCAGTAAATATTGGCAAAACAGTAAGGAGGCTGGCGGGGCGAGGGCGCGGGAGGGGGCGTGGCGCAAATTGGTGAAGGTGTACATGAAGAAGACCAAGATCCGGTGCGAGAAGGATCCATCCTTCCTAGAAGAGTGGAACCTGGTGACGTTTGCCGTGGAGCTGATGAAGCCGGAGTCCAAGTCCAGCGACTACGTGTCCGGGGCGATGATCCTGGACACGATCCTCGGGCAGAAGGACCTGACGGCGCAGCACGCGCTGATCAGGAAGCTGGTCGGCTCGGCGTCCTCCAGGAAGGTGATGAAGAAGCTGCTGCGGTCGCTTCGGTCCGCGAGCCAGTACAACCGGAACATCCGGGTGCACGCCGCCCGGATCGTGTCGCGTCTCGCCGGCGAGATCAGCCTCGCCAGCTTCCCGGAGGCGCTCTCGTGCATATCGTCGCTGCTCGACACCACCACCACGGAGCAGCAGGAGCAGCAGCAGCAAGACGGAGACAGTGCACCGTCCGCTCACTACAGGGATCTCATGGTGCTGGGCCGCGTCATCCTTCAGAAGCTCGCCGCCGCCGACGAGCACAACCTTTTTCTCATCGGCAAAAAGCAGAGCACTATCTCCAAGGCCATGCTGCCCGTCAGAAAAGACCTGCTCCACATCCACAACAACGGCCATGTCGACGCATGGAAGGACATCGTGACCGAGTCACTGCAGCTCATGTCCCAGCTTGTCAGCGCCCCTGGGAAGACCGGCGACGATCTGCGCTCCCACATCTTGACGATTCACAAAGACGACATCAGAGTGAATAACATTATCATCTGTAAGCAATGCCAAAGCAACAAGAAGCTCCACATGCAGGCCATTAACATCTTCGCACAGCAACAGCATCCTATGGAAGCACTTTCGACGACGTCTTCGAATATAGACACAACAGATAGCGAAACGAACATCAGGCTGCTCGTAGACATCTTCTTGAATAACAAGGACGCCTCCACAAGAAAAATGGCAGTTGGCATACTGGCAATACTGCTGTCCGACCAAAATAAAAGCAATGCCAATGCCAATGCCAACATTATCTTCAAGGCAAGTGACACCGTTGTCCGTGATCTCAAGACAGTGCTTTTAGATGATAAGGAAACAGAATACAGAATATGCGCAGCAGAAATACTCGAGCATCTACACAGGACAAAGGAGGCCTCCTATCTCAAGAAACTGATGGAAGCCATGCAAAATGTGCTACCGAAGCAAGGAGAAAAGCAAGCAGAAAAGGCAGAAAAAGGAACAGACGGAACCAAGACAGATCCTGACATTGAAGAAGGTGCTGGTGCCGTTCCTTCGAAAGATAATGTCGACGTCAATGACCAGAAGGAGGACATTGGTAGGACGAGGAAACTACATGCAGCTTTACTGTCACTTAGTGTGGCAATATTTGAAAAACGGATCAGAGATGGTAAAGATTTGGATACACTTGCTGGTGAAATTGCCCGAGGAGACTCTGCATCCAGCTTTGTCGGTAAGCTGAGGACGATGGTAGATCAAAACAGTGAACAAACAGTCAATTGCCTGAGAATTCTGAAGATTGCCACTAGGATGATCATATCACTGCTAAAACTTGAAGGATGCTACCCCAAACAAGAGCTGGAGAACTTGATGGTATCTCTGTCCAAAGCTTCCGAACAAATGTTTGAACTGGAAGCGTTGATGATGTTATCTAGCAGCGACCATACCGGAAAGAAGACTGAAAGCTTCGGTTCTCTCGTGAAAGAAGCAGAGGGCCTTATGAAGAATAAGAAGGAAAAAAATGTGGCAACTACACCAGCTAGCACTATGAATGGAAACCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MAYGLYGLDHSEWLEVEYINHHALFVGYLSMAVKGVGFLVGLWTTVVLLGGFVSMLEKKDFWSLTIITLVQTAGVFDVLLNEKLRHAVNSVDGFLVTMDMVFRCEDDEFDSGIQLWRSLAGRLVTFIQAVVFAIILCPLAVLYLFGLVISTSLSLWRLIQHDYGDGDGSANLTPALNVLYSLALFQGVLFFYQWVSNFAGKRLIEKVASKYWQNSKEAGGARAREGAWRKLVKVYMKKTKIRCEKDPSFLEEWNLVTFAVELMKPESKSSDYVSGAMILDTILGQKDLTAQHALIRKLVGSASSRKVMKKLLRSLRSASQYNRNIRVHAARIVSRLAGEISLASFPEALSCISSLLDTTTTEQQEQQQQDGDSAPSAHYRDLMVLGRVILQKLAAADEHNLFLIGKKQSTISKAMLPVRKDLLHIHNNGHVDAWKDIVTESLQLMSQLVSAPGKTGDDLRSHILTIHKDDIRVNNIIICKQCQSNKKLHMQAINIFAQQQHPMEALSTTSSNIDTTDSETNIRLLVDIFLNNKDASTRKMAVGILAILLSDQNKSNANANANIIFKASDTVVRDLKTVLLDDKETEYRICAAEILEHLHRTKEASYLKKLMEAMQNVLPKQGEKQAEKAEKGTDGTKTDPDIEEGAGAVPSKDNVDVNDQKEDIGRTRKLHAALLSLSVAIFEKRIRDGKDLDTLAGEIARGDSASSFVGKLRTMVDQNSEQTVNCLRILKIATRMIISLLKLEGCYPKQELENLMVSLSKASEQMFELEALMMLSSSDHTGKKTESFGSLVKEAEGLMKNKKEKNVATTPASTMNGNQ</aaseq>

Gene Sequence

<dnaseqindica>1..221#3943..5581#5753..6352#ATGGCTTATGGGCTTTATGGGCTTGATCACTCTGAGTGGCTGGAAGTTGAATATATCAACCACCATGCTCTGTTTGTAGGGTACCTGTCGATGGCCGTCAAAGGGGTGGGCTTCTTGGTGGGTTTATGGACCACCGTTGTTCTTCTTGGTGGCTTCGTCTCTATGCTTGAGAAGAAGGATTTCTGGAGTCTCACCATCATCACACTCGTCCAAACAGCAGGGTTAGACTGCTTACTTTCAATATATATATTTATTTATTTATTTTGAAGCTTTCCTGCTTAGTAATGTTCTTCGCCAAACCTGTGTGGCTTTTTATTTGACTCTTTTGGTCTTTCCCTATAATAAACAAATCTACTTTTGGAACAAAGGATTTTCAGTAGTTATCCTTCGTTCCTCTGGAGGAATTTCTACTACTGTTGATGTTCATTTCTGGGGGAGGAATGCTGCGGTGGAATTTCGTTGGGAGACTGTAGCATTAGTGGAATTCCATAGGAAAGGAAGCATACACTCTGTCACTCATCCTACCTCATGTTTCACTACGTGTTTATGCTGCGTAGGATTTTTAGAGGAAAGGCTAGCTATACGCGCTGTTTTTTTTTTCCGAAAGCATAAGCATCTTACAGGTTTATTGCTGGGAACTCCAGCTAGTTTGCCTATATACTAGCATTGGTAAACAGACATCTGCTAGGGACATACTAACATCTCTATATCTGCCAAGCTAAACGACCTTCTTCCATAGAGAGTTCTTGAGAAGCTCAGAGCAAGCAAACTCCCTTCCCACAGCAACTGCAAGCTCAGAGCTACATGATTGACATCGCAAAAGACCTGACTAATACTAAGGCCTTGTTTAGTTCCCAATTTTTTTTTTCCAAAAATATTACATCAAATCTTTAGACATATGCATGGAGCATTAAATATAGATAAAATGAAAAATTAATTGTACAGTTTGCATGGAAATCACGAGACGAATCTTTTGAGCCTAATTAGTCCATAATTAGCCATAAGTGGTACAGTAACCCACATGTACTAACGACGGATTAATTAGGCTTATTAAATTTTCTATAATTTTTCTTGGGTTAAAAATGCTATTACTTTTTCTTTAAACTTAGTCAAACTTAAAGCAGTTTGACTTTAAACAAAGTCAAAACATCTTATAACCTGAAACGGAGGGAGTATTATATATCTTCATATTAAACTAATACTCCCTCCAGGTTGATAATACTTGTGTTTCGGACAAGAGTACAATCTCCCAAAAAAACAACTTTGACAATTATTTTCTATTATAATATGTATAAAAGTGTTAATAAATATATGATTTTATTAAATTACTTTTTAAGACTAGTGTATACATGTAGTCACCATATACGAAATACAAATATTTTTAAAATGATTTATAATAAAAGATTCTAAAGTTTGACCTCACCCTTGTCTAAAACGATAAGTATTATATCAGCCTTTAGGGAGTAAATACTGAATTGATAAGAATAAAATGTATTAAGGATATTGTTGGTGTTTTCTTCGCCAACATAGACTCACCTAAATATTTACGGTGCTAGCGGAGTCATTAATCACATTGATCTATAAAAGCTCTTGGTCAAGATGGATTTAGAAAACCAGCCTCTAGACTAATTTAGTTTGATTTGGAGATAACTACTCTTCTCGTGAACGAATTAAAAGATTTACGGGACAAACCTAAGGATTTCACACTCTCAAGCAAAAGCATATGTTTTATGATGCCGATAAAGAGGGACGAACCAGAGTACTTGGTAGAAGGTAAAGGTAAAAAATATGATTTAATTGATGTCTTCACAAGCCTTTTGCACGTCATATTAGACTTAGAGATCAATTAGGACTCAACTTTTCCGAGCGAACTGCCTTAATTGGATATTAGACTTAGAGATCAATTAGGACTCAACTAACCTTAGGCCTATGCTAGGAAACACGCGAACTGCCTTGATTGGATTCAGACTCTGGGCCACCGGTCCAACTGGACCACAAAATAGCGGTTCGACCACAGTTCACCCTCTGGTCCAACCGGCCATGGGAAAGCTCTGTTTGTTACAAATCTAGCCTAAACTTGCTATAAATTTATCCAAATGTCAAATTTGGTTGTAAACAGATATATTTGTCAACAAAATCATGTATTCATTGAAACAAATGTATTTGGACGAAGTATAGAGCAAGTTTATTTGCTATATAGTGTTTACTTATTAGGAAATGAAATTGCCATAAGGTTCAAAAATCAAATGGCATGAATCAACAAGGAAAAATATTTTTTACGAGATAATAGGGAAAAATATTGAAACATAATTGTTATTACATGAGATTTCAATCAAAGTTAGAACATTTGAAGTTCGACAGAATACCTACATAATTTGCAGTTATACCTATGCTGCAGTTCCAAAGCAACAGAAAAATATAATAGTAATTACTACAGCACCATCCAAAACCTTCAACTTTCTTGTGTAAAATATGGTGTCCCCTTTCTTCTTCATCTTTTTTATTTTTTTCACTTCTTCTCACCTCTTTTTTTTTCCTATCTTTTTAACTTGAACCAACAAAAACATGAAACAAAAAGGAGTTGCGACAATAAAAATTGCAACGGGAACTAGCAACACGATGAAAGCGAATGACACAAGATACTAGCAAAGCTNTGGTATTTTGTAGACCATTGGATGGAATCAAAATCAATAAGAACACTCAAATATCTAATGGAAAGAAGCTATATGTGAATGATAAACCTACCATGTCAAAGAAAGACATATGACACAAACTCACTCACCAAGGGGGGGGGGGGGTCCATATATATCTTCAATTCAGGGCAATAGGTTTGAAGCAAGGAACACCAGCATAAACTGAGCAGCTTAACGGTAACTAGCTGCGTGTAGCAAAATGATAGCTAGCTTTATTCTTACCAAGGTCGATGCGGCCAAGTAGTTAGGGAGAGAATGATTCGAAACATCTTATACTCCAATACAACAATTAAAAAAATCGTAAAACCACAATCCGGATCTACTTCACACATGAACTAGGGGGTCTATGAGAATCCTTCTCATAAGTCCAAAGAATACTCAAGAGCATTGGGGGTAAGACAATACACGGTCTTCAGCAATCTCTCATCCAAGAGTTTTTCACTTGAACAATAGTTCTCTAATAGATGGAGTAGAGGAGTATTTATACTAGAAACATCCCCCTACTAAGGTGTGAACATGAACAACCAAGTTCTGGTGTTTAATGGCAAGATAATGAAGAATGCAAAGAGTTTTCTCTGGTTCATGCACGACCTTTCAGCTCCTACGCAGTATTCAGTAAAATGATTCTAACTCCTCGGAAAATGCTTTTGAGGTGGGCTTTGTTGTGTTCAAAGCTATAATGACCCTCTTTTGAACAATGTATGCCATGCACCATGTCTCCTGATTGGCTAGGTGGCATAAACCTTAGAGTTTGGCCTTCCCTTCAGTTGTGTAAACAGTCTTCTCTCAAGCGTAATTAGTCGTTGCTAGTGTAGGAGCCCATTTCTGTTAACTGTAATCCTTCTCATCTTGAGCATATGCCATTCTCCTTAGTGTAAATCATAGTAATGCAAATGTGAAGCATTTAGGTAGTATAAACTTCTTACCATTATTTATGTTAAGTTTTATAAAGAGCGAGTTCACCTCCTGTTGTACCTTTCTAGCATGACTGCACGTAATCGATCCATGGTACGGTAAATGTGACCATATTCCCATCGAGCTAGTTGTTGAGGTGTAATTCATCCTCACAGTTTACACCATCTTCGTTTCCCACTTGTGGTGGGTGACGTAAATCATTGTTTTGGTTTACATCATGTTGATTTTCGTGTGCAGTTAGGATATCCTTATCATTTAAGTGTGTATATCTACTTACAGATATAGAGACCATATTTCTCTATCCATCGTGTAATTGTAAGAATGATCTAAACAGGGTGTTCGATGTTCTCCTGAACGAAAAGCTGCGCCATGCTGTGAATTCAGTCGATGGCTTCTTGGTTACTATGGACATGGTGTTCAGGTGCGAAGACGACGAGTTCGACTCGGGCATCCAGTTGTGGCGTTCACTAGCAGGACGTCTTGTGACGTTCATCCAGGCGGTGGTGTTCGCCATCATACTGTGCCCTCTGGCTGTGCTCTACCTGTTTGGGCTGGTCATCAGCACCAGTCTATCGCTGTGGCGCCTCATACAGCACGACTACGGCGACGGCGACGGCAGCGCCAACCTGACTCCGGCGCTCAATGTGCTCTACTCACTGGCACTCTTCCAGGGCGTCCTCTTCTTCTACCAGTGGGTGTCCAACTTCGCTGGGAAAAGGTTGATCGAAAAGGTGGCCAGTAAATATTGGCAAAACAGTAAGGAGGCTGGCGGGGCGAGGGCGCGGGAGGGGGCGTGGCGCAAATTGGTGAAGGTGTACATGAAGAAGACCAAGATCCGGTGCGAGAAGGATCCATCCTTCCTAGAAGAGTGGAACCTGGTGACGTTTGCCGTGGAGCTGATGAAGCCGGAGTCCAAGTCCAGCGACTACGTGTCCGGGGCGATGATCCTGGACACGATCCTCGGGCAGAAGGACCTGACGGCGCAGCACGCGCTGATCAGGAAGCTGGTCGGCTCGGCGTCCTCCAGGAAGGTGATGAAGAAGCTGCTGCGGTCGCTTCGGTCCGCGAGCCAGTACAACCGGAACATCCGGGTGCACGCCGCCCGGATCGTGTCGCGTCTCGCCGGCGAGATCAGCCTCGCCAGCTTCCCGGAGGCGCTCTCGTGCATATCGTCGCTGCTCGACACCACCACCACGGAGCAGCAGGAGCAGCAGCAGCAAGACGGAGACAGTGCACCGTCCGCTCACTACAGGGATCTCATGGTGCTGGGCCGCGTCATCCTTCAGAAGCTCGCCGCCGCCGACGAGCACAACCTTTTTCTCATCGGCAAAAAGCAGAGCACTATCTCCAAGGCCATGCTGCCCGTCAGAAAAGACCTGCTCCACATCCACAACAACGGCCATGTCGACGCATGGAAGGACATCGTGACCGAGTCACTGCAGCTCATGTCCCAGCTTGTCAGCGCCCCTGGGAAGACCGGCGACGATCTGCGCTCCCACATCTTGACGATTCACAAAGACGACATCAGAGTGAATAACATTATCATCTGTAAGCAATGCCAAAGCAACAAGAAGCTCCACATGCAGGCCATTAACATCTTCGCACAGCAACAGCATCCTATGGAAGCACTTTCGACGACGTCTTCGAATATAGACACAACAGATAGCGAAACGAACATCAGGCTGCTCGTAGACATCTTCTTGAATAACAAGGACGCCTCCACAAGAAAAATGGCAGTTGGCATACTGGCAATACTGCTGTCCGACCAAAATAAAAGCAATGCCAATGCCAATGCCAACATTATCTTCAAGGCAAGTGACACCGTTGTCCGTGATCTCAAGACAGTGCTTTTAGATGATAAGGAAACAGAATACAGAATATGCGCAGCAGAAATACTCGAGCATCTACACAGGACAAAGGAGGCCTCCTATCTCAAGAAACTGATGGAAGCCATGCAAAATGTGCTACCGAAGGTATGTCCTGCGATCGATAAATTTCAAATAAATGGCGGCATTTGTTTTGTTTGATTTTATTCTTATTTAACTAACCGCATCTTGAATTTTTATCCTTGCCAAATAATAAGCATCAATCCTACCGTTGCAGATTCTCAACGAAATATTTATCTCTCTCTCTCTCCACCGAAGCAAGGAGAAAAGCAAGCAGAAAAGGCAGAAAAAGGAACAGACGGAACCAAGACAGATCCTGACATTGAAGAAGGTGCTGGTGCCGTTCCTTCGAAAGATAATGTCGACGTCAATGACCAGAAGGAGGACATTGGTAGGACGAGGAAACTACATGCAGCTTTACTGTCACTTAGTGTGGCAATATTTGAAAAACGGATCAGAGATGGTAAAGATTTGGATACACTTGCTGGTGAAATTGCCCGAGGAGACTCTGCATCCAGCTTTGTCGGTAAGCTGAGGACGATGGTAGATCAAAACAGTGAACAAACAGTCAATTGCCTGAGAATTCTGAAGATTGCCACTAGGATGATCATATCACTGCTAAAACTTGAAGGATGCTACCCCAAACAAGAGCTGGAGAACTTGATGGTATCTCTGTCCAAAGCTTCCGAACAAATGTTTGAACTGGAAGCGTTGATGATGTTATCTAGCAGCGACCATACCGGAAAGAAGACTGAAAGCTTCGGTTCTCTCGTGAAAGAAGCAGAGGGCCTTATGAAGAATAAGAAGGAAAAAAATGTGGCAACTACACCAGCTAGCACTATGAATGGAAACCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036036