Os12g0168100

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Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0168100| Description = Similar to AP2 domain containing protein RAP2.6 (Fragment)| Version = NM_001072784.1 GI:115487529 GeneID:4351606| Le...")
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Gene Name

Os12g0168100

Description

Similar to AP2 domain containing protein RAP2.6 (Fragment)

Version

NM_001072784.1 GI:115487529 GeneID:4351606

Length

2695 bp

Definition

Oryza sativa Japonica Group Os12g0168100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3436445..3439139

Sequence Coding Region

3436891..3437564,3438739..3439090

Expression

GEO Profiles:Os12g0168100

Genome Context

<gbrowseImage1> name=NC_008405:3436445..3439139 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3436445..3439139 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agcggtccatgtgctgtaccggcgacgaggtggcgggacccggagagcagcggcggcggccgctcgacgccgacgccggcggcgacaagggcgcggtggcgacgacgtcgtcgtcgttgttggcggcgccgatgctgtcgcggcggaggcaggcggaggagatggcggcgatggtgtcggcgctggcgagtgtcgtggccggcggcggcggcacgtcgttgccggcgaagaggccagccgagagagagcccgaggagggcgccgccgtggagggggtgtggtggtcgtactgcagtgagctcgccgccgccgccgccgcgccgtcgccggcggctccatttccggccggtacgctacgtgccatcgccggggcaacactcgcctgcgtcggcggcggccggcgacgaggaggagctcccgtcgccgtcctcggccgactccagcggcggcacggcgaggaagcggtacagaggggtgcggcagcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacggcgccgccctccgcttccgcggcagccgcgccaagctcaacttccccgagcacgccaccctcccaccgccgccgacgacgacgacggccgccgctcaccggtgcccgccaccgccgcggacggacgcgctgctggagtcgcaggagctctctcccggcgccggcggcggtgacccgtactctcagtacgcgaggttcttgcagggctccggcggcgacggtggcgaggcggcggcgcggcccggcggtggcgcctcgcaaagaacgccacccgccactacactgctctacagcttcgagggagacgctgcttccgccgcctgcctctggcagccggagagcggcggcggcgggatggggtggccggcgacttcgccggcggcgtggttggagtacggtttctacccgccgccggagcggcgcgacacggacacgtag</cdnaseq>

Protein Sequence

<aaseq>SGPCAVPATRWRDPESSGGGRSTPTPAATRARWRRRRRRCWRRR CCRGGGRRRRWRRWCRRWRVSWPAAAARRCRRRGQPRESPRRAPPWRGCGGRTAVSSP PPPPRRRRRLHFRPVRYVPSPGQHSPASAAAGDEEELPSPSSADSSGGTARKRYRGVR QRPWGKWAAEIRDPHKAARVWLGTFDTAEDAARAYDGAALRFRGSRAKLNFPEHATLP PPPTTTTAAAHRCPPPPRTDALLESQELSPGAGGGDPYSQYARFLQGSGGDGGEAAAR PGGGASQRTPPATTLLYSFEGDAASAACLWQPESGGGGMGWPATSPAAWLEYGFYPPP ERRDTDT</aaseq>

Gene Sequence

<dnaseqindica>1576..2249#50..401#aacggaagcttagctgagttgggtttggtctcgccgctggccggagtagagcggtccatgtgctgtaccggcgacgaggtggcgggacccggagagcagcggcggcggccgctcgacgccgacgccggcggcgacaagggcgcggtggcgacgacgtcgtcgtcgttgttggcggcgccgatgctgtcgcggcggaggcaggcggaggagatggcggcgatggtgtcggcgctggcgagtgtcgtggccggcggcggcggcacgtcgttgccggcgaagaggccagccgagagagagcccgaggagggcgccgccgtggagggggtgtggtggtcgtactgcagtgagctcgccgccgccgccgccgcgccgtcgccggcggctccatttccggccggtacgtacgtgtacgtaagcagagcagtatagtaaaagttgaatgcaacatgattaattaaagtctacctcggactttgttaattaaccaaactaatataatcatgattacattgatcacaaagtgacttgcttgttctctctatcaccttttctaattaaccattaggttgatgattaacattaactaaaatgcatgcatctctcttttcctttggtgaaaaaaaaggaggattgattttgaaccttattgatatgaaaaattacaattgagaaaatgatgaacaaaacagtaaaactacgtatactttgcaattttatatgactaataataagagaaattttaatgactgattaagcacaattaaaatgaatgataaagctttttttttattattttctctttgttttattcaaaagtaatcacaaagatgttagcctggtaggagtatattgttatagtttagtggtgtttacactaacacacacgacgtgcacgcatcttgcagcatatgcataagcaaagcatatgggttggtcaatgtgcacgtgtggatccacgcgtcacacgagcagaggctgctccaaccaccgccacatcgcaactaatataatcattgttatggacaaaattaagagatcccatgggcttaatttattcattagggaaaaagattaagagaaacaatgggatgggtagctcactaacaaccaaacacgtgttccttaatcgccacgtttcgtcattcttagcatcaaacacacgaaatgaactttgttttaaaaacaaacacacgaaatgaacttgtgactagttaaaaccagtagtccgcattgacattaaaatataggaacattctgatcatccaagagaagtttgcatgtcaccttttgtattagtttaacacaaaaacagagcaagtgagaagaaaatcagagtatctcaaagagagagaagcaaaacagagtaaccaaattaaccagatcaaattacttttaaaaatcacagctcaaatcactgtgttacaaactttttttactacatagtttctggatattattagtatggatacatgaaaataattgaattttattactatagataattaagcgctaatcaaaacaggttcttgtcctaatctcccctgttttttttttcttttttttacgcgttcgcaggctacgtgccatcgccggggcaacactcgcctgcgtcggcggcggccggcgacgaggaggagctcccgtcgccgtcctcggccgactccagcggcggcacggcgaggaagcggtacagaggggtgcggcagcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacggcgccgccctccgcttccgcggcagccgcgccaagctcaacttccccgagcacgccaccctcccaccgccgccgacgacgacgacggccgccgctcaccggtgcccgccaccgccgcggacggacgcgctgctggagtcgcaggagctctctcccggcgccggcggcggtgacccgtactctcagtacgcgaggttcttgcagggctccggcggcgacggtggcgaggcggcggcgcggcccggcggtggcgcctcgcaaagaacgccacccgccactacactgctctacagcttcgagggagacgctgcttccgccgcctgcctctggcagccggagagcggcggcggcgggatggggtggccggcgacttcgccggcggcgtggttggagtacggtttctacccgccgccggagcggcgcgacacggacacgtagggttaatcacgatgtgatcctgagcggaataggcggtgacgctgacaggtggggcctacttttgccaggtgcggtcaacggtcaacctgaagttgacgtggcatgccacgtaatgcggcggtcaacgggttcagacggaagtgggtcatggacggcacgagacgccgtcagaaataaatgctcgaaactgacacgatggattacattgttcgtcaaattctcagagggccacatagttgcaggagggggaattattattcagcattgtttttttcgtaaaattcatcgctccaaaaacatcacacatctcaagcttgtacgaatgaaactagtgcagtctgaagattttctttttctggttttatagaacaaaagatttttgaagaaacccaatcctatgaaaaaaaatttcttatatgaaaggaatgggcatccaaaattcctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0168100, RefSeq:Os12g0168100