BGIOSGA036047

From RiceWiki
Revision as of 08:15, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036047| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036047, complete gene.| tag = OsI_386...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036047

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036047, complete gene.

LocusTag

OsI_38638

Ensembl Transcript ID

BGIOSGA036047-TA

Ensembl Protein ID

BGIOSGA036047-PA

Length

3706

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:17701412..17705117

Sequence Coding Region

17705005..17705117,17704790..17704907,17704440..17704498,17703827..17704314,17703566..17703726
,17703202..17703399,17702964..17703126,17702803..17702879,17702441..17702710
,17701412..17701570

Genome Context

<gbrowseImage1> name=IndicaChromosome12:17701412..17705117 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:17701412..17705117 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCCTTCCACGAGGCTCCTCTCCTGGTCCTCCTCCTCCTCCGACGACGACGGCGCCGGCGCCGGCGGCGAGCTGTCCCGCCCTCGCAGGCGGTGGCGGGCGCTTGTCCTGGGGCTCGGGGTGAGGAGGAAGAGGAGCATGGAAGGGGTGTTCGGGTTCAGGGAGATGATGGGGGAGGAGTTCATGGGCATGTTCCTCCCCTTCTTTGGCAAGATGGTTCAGAAAGTGGTTTCAGAAGAAGTAGAGAAAGCAATTTTCAGACAAGTCAGCACACCAGCGCCTCCAAGACTGCTAGCAGGATTGAATCAGCAGCGTCCAAGGTATCAACTCGTGTTCCTGAATGAACTAAAGCCTGTTTACACACTGATGAAATTAGAAGCCAAGGATGGACCGGGTCTTAAGGTGGCTATAGTCGAAAGACTCGAAAACAATCAGATGCGCATCATCAGGTTCGGTCATCTTGCTTCTGCTAAGGTTGAAGTTGTAGTCCTCCATGGCAACTTTAATGCTAAAAATGAGGAACAATGGACCCCTGAAGACTTCAGCAAGCAGATAGTATGCGGGCGAGAGAAAAGCGCGCAACTTCTCACCGGAAATCTGACGCTGAAGCTCAATGGAGGGGAAGCATTACTTGAGAATGCAACCTTCACTGATAACTCTAGCTTCACAAGCACTAAGAAGTTCAGGCTGGGTTTGAGGCTAGTCAACAATTCTGAAGATAGGGTTCTTGAAGGAATCACTGAACCTTTTCGTGTAAAGGAGCGCAGGGTGGAGGGATTTGAAAAGCACTACCCACCAATGCTGGATGACGAAGTTTGGCGTTTGGAAAAGATCGGCCGCAATGGAGCTCACCACCAGGCCTTGACAAACAGTGGAGTTAATACTGTGCAGAAGTTCTTACAATCATATTTTACAGATGAAAAGAAGCTTTTTCAGACTTTTAGCAAGATGTCACAGGCAGCTTGGAAAACCATCATAAGCCATGCCATGACATGTGAAGTCGGTGACGATCTTTGCTTGTATGAAGTGAAGGGCAACAACGTGGGACTTTTCTTCGATGCAATATATCAGCTTGTTGGGGTGAAGTTTGGTGATTCTTACAAGCCCATAAATGAGCTCGACGAAATAGATCAGAGTGCAGTTGAAACAATGAAGCAATTGGCTTATGCGAATATAAGTGGTATTCAGTATGACCATAAGATGGTCAACAACTATCCTGTACCGCTTCATAGGTTCCATTGTGGGGGAACTTCTATGTTGACTGACTTTATTCCTAAACAGCAGATCCCAACTTGTGGTCAATACAATTCAGCCCTGGCTGGTCAACCATTTGAATCAACGGAGAACTTTTCTTCATTCCATGAAGCCTCTAATGCTTCAGTGGATATGTCAAGATTTGTGCAGGGTCAAACCTCCAACGTGCAGTTTAGCCAACAGTTGGGCATGGGCAATTTTATCCCACATCATTCAAATCAAGGAACATTCATACCCAGACCAAGAATCACTCCTCTGTGTATACCTAATACCGAAAAAACATATTTTAATCCAAACGCTCATAGCAGCATCCAGGCTGATCATGCTGCCACACGAATTGGCCAGTATGCACATAATGAGCGATCTCATTCACCTGAAGAATCATACAAGTTTTCTAGCAATGAAGGAGTTGCGGTGCCATTGTCCCCACGCAAGTGGGTCAAGATCAGGGCAGCGCTGAAGCTGGCATCTGTGGGTAGGCTCTCCAGAGCCTCGAGAAAGGCTTCGCATCGCCCCCCAGCAAGGCCAAGGCTTGTCCCAATAGTATGA</cdnaseq>

Protein Sequence

<aaseq>MAPSTRLLSWSSSSSDDDGAGAGGELSRPRRRWRALVLGLGVRRKRSMEGVFGFREMMGEEFMGMFLPFFGKMVQKVVSEEVEKAIFRQVSTPAPPRLLAGLNQQRPRYQLVFLNELKPVYTLMKLEAKDGPGLKVAIVERLENNQMRIIRFGHLASAKVEVVVLHGNFNAKNEEQWTPEDFSKQIVCGREKSAQLLTGNLTLKLNGGEALLENATFTDNSSFTSTKKFRLGLRLVNNSEDRVLEGITEPFRVKERRVEGFEKHYPPMLDDEVWRLEKIGRNGAHHQALTNSGVNTVQKFLQSYFTDEKKLFQTFSKMSQAAWKTIISHAMTCEVGDDLCLYEVKGNNVGLFFDAIYQLVGVKFGDSYKPINELDEIDQSAVETMKQLAYANISGIQYDHKMVNNYPVPLHRFHCGGTSMLTDFIPKQQIPTCGQYNSALAGQPFESTENFSSFHEASNASVDMSRFVQGQTSNVQFSQQLGMGNFIPHHSNQGTFIPRPRITPLCIPNTEKTYFNPNAHSSIQADHAATRIGQYAHNERSHSPEESYKFSSNEGVAVPLSPRKWVKIRAALKLASVGRLSRASRKASHRPPARPRLVPIV</aaseq>

Gene Sequence

<dnaseqindica>1..113#211..328#620..678#804..1291#1392..1552#1719..1916#1992..2154#2239..2315#2408..2677#3548..3706#ATGGCTCCTTCCACGAGGCTCCTCTCCTGGTCCTCCTCCTCCTCCGACGACGACGGCGCCGGCGCCGGCGGCGAGCTGTCCCGCCCTCGCAGGCGGTGGCGGGCGCTTGTCCTGTGAGTCAACGGCCGAGTCAACCCTGCGTTCTTGGTTGGGTTCAGAGATGGCTTGGTTGCTCATGAATTTGTTTTTTTGTTCTTTGGTTGGTTGCAGGGGGCTCGGGGTGAGGAGGAAGAGGAGCATGGAAGGGGTGTTCGGGTTCAGGGAGATGATGGGGGAGGAGTTCATGGGCATGTTCCTCCCCTTCTTTGGCAAGATGGTTCAGAAAGTGGTAATGATTTTCATCCAACCTACTAGTATTTATTACCTTTCCTTCAGGGAGTGGTAAAAAAAGCCATATTTTTTTTTGAAGTTTTTTACCCAATTGTGAATTTACACATGCATCTACCAATTTTGAGATATACTATCGATTTTGTGCAACATTCAGAGCAAAGATATGTTAGATTGATAAGTTCATCCCAATAAAAGAAGAGACATGCGGACATTGTTGTTGATTTCAACTTGGATATTAGAATTTAGAAGTGCTCCCTGTCCGCTGACCTGAAATTTGTGCTTTTTTCAGGTTTCAGAAGAAGTAGAGAAAGCAATTTTCAGACAAGTCAGCACACCAGCGCCTCCAAGGTGAGGCTTGAGACATATACTAGCTTTCATTTATTATGATTACTAAATTTCACATGTAATAAAAAAAATTTGATGTTTAGTTTCTTTCTGCTCTAACATACTTAATTTGGTTCTTTCATCTGCAGACTGCTAGCAGGATTGAATCAGCAGCGTCCAAGGTATCAACTCGTGTTCCTGAATGAACTAAAGCCTGTTTACACACTGATGAAATTAGAAGCCAAGGATGGACCGGGTCTTAAGGTGGCTATAGTCGAAAGACTCGAAAACAATCAGATGCGCATCATCAGGTTCGGTCATCTTGCTTCTGCTAAGGTTGAAGTTGTAGTCCTCCATGGCAACTTTAATGCTAAAAATGAGGAACAATGGACCCCTGAAGACTTCAGCAAGCAGATAGTATGCGGGCGAGAGAAAAGCGCGCAACTTCTCACCGGAAATCTGACGCTGAAGCTCAATGGAGGGGAAGCATTACTTGAGAATGCAACCTTCACTGATAACTCTAGCTTCACAAGCACTAAGAAGTTCAGGCTGGGTTTGAGGCTAGTCAACAATTCTGAAGATAGGGTTCTTGAAGGAATCACTGAACCTTTTCGTGTAAAGGAGCGCAGGGTGGAGGGTATGCCATTGTCCCAAAGATTCAGATTGTTTGTTTCTTCAGAAATATCTTTTGGACCTTATAGCTGAGACTAATAATATGCAACTCACTATTTTTGCAGGATTTGAAAAGCACTACCCACCAATGCTGGATGACGAAGTTTGGCGTTTGGAAAAGATCGGCCGCAATGGAGCTCACCACCAGGCCTTGACAAACAGTGGAGTTAATACTGTGCAGAAGTTCTTACAATCATATTTTACAGATGAAAAGAAGCTTTTTCAGGTAGAGGTTCTATGAATTTCCTTAAATATTAAATTTCAGATGATGTTTCCATAACACAAGGACCTGATAATATAGATGAGCCGTTGGTTTCAAAAGAAAAAAAAATAGACTCACCGAATTCCCTAAAAAGAGTGACTGACAGAAGATCTTTGATATTTGTCTATAGACTTTTAGCAAGATGTCACAGGCAGCTTGGAAAACCATCATAAGCCATGCCATGACATGTGAAGTCGGTGACGATCTTTGCTTGTATGAAGTGAAGGGCAACAACGTGGGACTTTTCTTCGATGCAATATATCAGCTTGTTGGGGTGAAGTTTGGTGATTCTTACAAGCCCATAAATGAGCTCGACGAAATAGATCAGGTACTGTTTCCTCACTTCCTTCAACAGGAGATTTTCTCACTATTTTCCTAATAATTTGGTGTTTTTTGTTCACAGAGTGCAGTTGAAACAATGAAGCAATTGGCTTATGCGAATATAAGTGGTATTCAGTATGACCATAAGATGGTCAACAACTATCCTGTACCGCTTCATAGGTTCCATTGTGGGGGAACTTCTATGTTGACTGACTTTATTCCTAAACAGCAGATCCCAACTTGTGGTAATATCTTGTTCTGAGAATTTCAATCACTAGCGATAATTACTTTTTTGGGGATTTTTGGTCATCTATTCCAATTGTTTACAGGTCAATACAATTCAGCCCTGGCTGGTCAACCATTTGAATCAACGGAGAACTTTTCTTCATTCCATGAAGCCTCTAATGTAAGGAAGATATTTTGAAATATACAAAATACAGTACATAATAAAATACATATGCATGTTAGTCTAAGATAGTTTCATCAATTTTCTAGCAGGCTTCAGTGGATATGTCAAGATTTGTGCAGGGTCAAACCTCCAACGTGCAGTTTAGCCAACAGTTGGGCATGGGCAATTTTATCCCACATCATTCAAATCAAGGAACATTCATACCCAGACCAAGAATCACTCCTCTGTGTATACCTAATACCGAAAAAACATATTTTAATCCAAACGCTCATAGCAGCATCCAGGCTGATCATGCTGCCACACGAATTGGCCAGTATGCACATAATGAGCGATCTCATTCACCTGAAGAATCATACAAGGTAAGAACCTTTTTTTATGTAAAAATCTATGTATTTTGTCTAGATAGAAATCAAAGAGTAAAAATTTGACATTACTTATGCTCTTCATTCAACAGAACTAATCCATTCTGTATTTGTGTTGACAGCGCTTTTCTCCAGATAATTTCCTCCATACAGATGAAGTTGTGGCTTTGATGCAACCTCACTTAGTGCCTCCAAGCAACAGTAATTACTCTCTGCTGATTTTTTTTTTTTTTTGGCTACATCTGATTCATTCATCTTGATGCTAATTACTAAGGATGGCATCTGCAGGCGAGAATTTCAGTAACCTGCTCAACCTATCAAGCAATGACCAAACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAAGAACCTTTTTTTATGTAAAAATCTATGTATTTTGTCTAGATAGAAATCAAAGAGTAAAAATTTGACATTACTTATGCTCTTCATTCAACAGAACTAATCCATTCTGTATTTGTGTTGACAGCGCTTTTCTCCAGATAATTTCCTCCATACAGATGAAGTTGTGGCTTTGATGCAACCTCACTTAGTGCCTCCAAGCAACAGTAATTACTCTCTGCTGATTTTTTTTTTTTTTTGGCTACATCTGATTCATTCATCTTGATGCTAATTACTAAGGATGGCATCTGCAGGCGAGAATTTCAGTAACCTGCTCAACCTATCAAGCAATGACCAAACCTCACAGCAAATTGCCGCTCCATTCCAGCCATCAAGAACAAACAGCTTTGACTCCAGCTGATGTGATCAGCTCATACAGAATTTCATTTCTCAGTTTTCTAGCAATGAAGGAGTTGCGGTGCCATTGTCCCCACGCAAGTGGGTCAAGATCAGGGCAGCGCTGAAGCTGGCATCTGTGGGTAGGCTCTCCAGAGCCTCGAGAAAGGCTTCGCATCGCCCCCCAGCAAGGCCAAGGCTTGTCCCAATAGTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036047