Os12g0168200

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Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0168200| Description = Ssu72-like protein family protein| Version = NM_001072785.1 GI:115487531 GeneID:4351607| Length = 3976 bp| Definiti...")
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Gene Name

Os12g0168200

Description

Ssu72-like protein family protein

Version

NM_001072785.1 GI:115487531 GeneID:4351607

Length

3976 bp

Definition

Oryza sativa Japonica Group Os12g0168200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3449133..3453108

Sequence Coding Region

3449617..3449721,3452008..3452126,3452283..3452428,3452766..3452998

Expression

GEO Profiles:Os12g0168200

Genome Context

<gbrowseImage1> name=NC_008405:3449133..3453108 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3449133..3453108 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcatggaggcgaggaggaagatgaggttcgcgatggtgtgctcgtcgaacatgaaccggagcatggaggcgcactcgctgctcggccgcgcggggctcgacgtcgcctcctacggcaccggcacccacgtcaagctccccggcccttccctccacgagcccaacgtctacgacttcggcaccccctacaacgtcatctacgacgacctccgccgcaaggaccccgacctgtacaagaggaacggcctgctgccaatgctgaagaggaacacctcagtcaagctggcgccgcagaggtggcaggacaatgccggcgatgggctgtttgatgtgatattcagctttgaggagagggtcttcgacttaatcgtcgatgatatgcataaccgtgagcaaaggatgctaaagaacgcgctgataatcaatatggatgtgaaagataaccatgaagaagctggtgttggtgcaaagcttgctttagatttgtgtcagaagcttgaaggggcagatgaagattgggaggaaattattgatgacctgattattacatttgagaagcagcacaagcggaagctcacatacaacatggcattttactaa</cdnaseq>

Protein Sequence

<aaseq>MGMEARRKMRFAMVCSSNMNRSMEAHSLLGRAGLDVASYGTGTH VKLPGPSLHEPNVYDFGTPYNVIYDDLRRKDPDLYKRNGLLPMLKRNTSVKLAPQRWQ DNAGDGLFDVIFSFEERVFDLIVDDMHNREQRMLKNALIINMDVKDNHEEAGVGAKLA LDLCQKLEGADEDWEEIIDDLIITFEKQHKRKLTYNMAFY</aaseq>

Gene Sequence

<dnaseqindica>3388..3492#983..1101#681..826#111..343#gaatctcaaagcggacagccacacacccctcacaggcgagctcggtcggagcggcggcggcggcggcggcgaaccgaccctaccttgccggcggcgagcggcggcggcggatgggcatggaggcgaggaggaagatgaggttcgcgatggtgtgctcgtcgaacatgaaccggagcatggaggcgcactcgctgctcggccgcgcggggctcgacgtcgcctcctacggcaccggcacccacgtcaagctccccggcccttccctccacgagcccaacgtctacgacttcggcaccccctacaacgtcatctacgacgacctccgccgcaaggaccccgacctgtccgtcctactgctcttttcccttcttgattctgtgttctttccgggggctcttggtggtggcactggagaaggcaggatctcctttttagagtcgatttcgaatttatgagttatttgtggtgatttggttggtgttggcggaaatctgggatggtcatgatgggaacagatagctgttgtcttgcaatttgggggttttgttctaaatgtattgctccttagggcttagataactcttcacaatatttgattttgcgatatgcgatccttgttgatttgcggaaatggcagaaaagtttcttattaatgcattattatgtggtgtgccattcaggtacaagaggaacggcctgctgccaatgctgaagaggaacacctcagtcaagctggcgccgcagaggtggcaggacaatgccggcgatgggctgtttgatgtgatattcagctttgaggagagggtcttcgacttaatcgtcgatggtaatcaactgataacaattaacaataggggcaagttttttcggtctatcaaatgcatcacagtaacagttgtagtatccatatactagtatttacgtggatatgtaatcattcactaagatgggctagtatgttttttttctctttttgctgcagatatgcataaccgtgagcaaaggatgctaaagaacgcgctgataatcaatatggatgtgaaagataaccatgaagaagctggtgttggtgcaaagcttgctttagatttgtgtcagaaggtataagtaccataacatatatatagctcataaagctactccttcgattatgttgtttacctattgatctagttaatcttgttgtttgctactgatattaatgaagtgatttgtgttcggcagcccagcctcttggatcaacacatgctagatgggttgggctgggtctttgtatgtgtcaaatacaaaattagagagcagtgttagataaaaacaaactaatgtcaatcagtatgtctcctttgtcaaatttccagagaaaaaatagcatcttgtactgccctacatttataacacaatggtgcatcattaattaatttgggaacctgccaagatcactaattttctggatgcactatgctatagcatagccttatgtagtgtacctcatccgcagtctcatccgcagtctctagactgggagcacatgcaaatcattaccccaatatcgagggttggtgaattatctctagaatagggaacacatgcaaattaataccacattcagggttgtgaatgtctctagttggttattatcttaaggcttaagaagctcactgcaggcctactactgcctcacatctcatatcatgcaagacaatatggcacaaatttctcacatgtactatgtacctgtgtcttactaattttcacaacgatgagctactacacatgcatggcttcagttgagaaagatatatatcggggaggctcaaattctacttgatgtgaagatgaagatgaagcccaaatcaaaacgtttagatgctaggatcaagtttttaccagaaatgttgttcgttctgagttgtggcttacaaggattgctttgaaatttactacttttcagccaatttacattgcaaacacaaagttcataacctacaaaggttcagttagttgagtccaacaagtctatttacttggtttgtgccgaatctagtaactaggattgaaattgttggcactaaagggtgtctttgtatactcaaagggcttaatgtaagtggttcactgccacgtcaagaatattctgccaatagattgtattccttgtttccacatcggcgacaaatttggccttcaataacatccttgtgctcccttcaaatcataggccatgtggacaagcccaattgaattcccttattattctcagtgattgtgtttgctgggttctatacttctgtgattgctatttttgtggattgacatgctcaaatttgtgtttgtagaatattaaatgcttgcatattactttttcagtcaaatatctacattctgatcttttgactttctgttgggaagtgacaaatgaccgccgctcagttggatagcgatgtttctcaaatgctacccacccatgtttgactcccgactaggtgttccctgttgatggttgcttctccctattaaaaaagatagctagttcctccaagctgttccttttattttctatagccgagtgctgctcgggtggctagctgcgacctattttcttgcccactcgggttcgatccttgaccctaatgtgtttcgcgttgcttcctcccataaaaagagaactgctacttctgttttttttcctactctgttcgaaagttgacaaagtcgctggtaagtgtgttctaggaataaagacagggtaaccttgtttactcatatatttagatggtcaatcacttatatagtataatgaactttgaacctccaagttgctctaaattaacatagaaaaagtccccatgaatattctcattgtggtgaaaaccatgtatggactatggagcaaatctaacactcaccataaagaactttccatttcataaaagatgatgaagtgtattttgatgtttctttgtgtgtggtatactttcctaaaacaagtttagttatatgattcttctttgctttcttggacctgtatgctatccacatctgtttcttgaatgcgttacataacatctgcatattactaattaaccattgtctcaatagctatctcatatctgatggtatgattatgttgtaaatgaattttgacatcaatctgcacactagcaatccattgtgtgaaagtagaatttgatctatatattactattgttttctcattatgcttctcttcagtagttcctactacaatattttttttaccttagtttgtgcgggctagactggtaaaaggattcacttctgtaaagtgggactattgaaatatttgaaatgagataatgtacttggtgaaccacgagaagttaattcatatattgcttcctttttcagcttgaaggggcagatgaagattgggaggaaattattgatgacctgattattacatttgagaagcagcacaagcggaagctcacatacaacatggcattttactaacttctgtagttcatcgtgcggattatacagaggcagcagaatcattcttaaattaactcgatcgtgtggatggctggtagcttggcatgcagggaaatgtacaaaaactgaggtaccaactggatccaagtgtggttcctgttccatgccaacaaatgggggaagatgtgtgaaacttgattaaagaaaatatgttctgcgttgagtcgctcgattgttgttagaggataattggatattcagatgttgatcttgaagctacccatcatctcaaaaccatgcagcaccgaatgttactcatttgctttagtggctgcctaaaattcatggtgagcctgatgaatggtacagtacatgttaatgaattggcctatcagtacagtacagtaagattcagaaggtgaacgaggcagacagtgaccaaaaccatgaatttcagtggtgatggctttcaaaatatagctagaaatgcattatatttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0168200, RefSeq:Os12g0168200