Os12g0168500

From RiceWiki
Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0168500| Description = Hypothetical protein| Version = NM_001189878.1 GI:297728886 GeneID:9271014| Length = 2412 bp| Definition = Oryza sa...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0168500

Description

Hypothetical protein

Version

NM_001189878.1 GI:297728886 GeneID:9271014

Length

2412 bp

Definition

Oryza sativa Japonica Group Os12g0168500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3469266..3471677

Sequence Coding Region

3469266..3469742,3469846..3469935,3470056..3470338,3470423..3470479,3471592..3471677

Expression

GEO Profiles:Os12g0168500

Genome Context

<gbrowseImage1> name=NC_008405:3469266..3471677 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3469266..3471677 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctatagtggttgatagtgaactcatggctaatcctaatcctttagagccattgtgtgttgttccacctactcatagtgcacggggattatctgcatctaaagtggcagattctaccgaatcctcaacctcagaaacaaaactcttagtgcttatatgtgttgttccacctattcagacagggcaaggagcatttgtatctgaagtgacagtttctactgaacctgcaaccaaagaagcatatgggacattgcctaatgtgtttgataatgtggaagagtatatatgtgtcaatggtaaggggttatatattgatgtgccacctattccatctactgatggtgctgaaccctctgtgcctactcaaacttatggccctagtgagacttttggggttgcagaaccttatgcagaggttgaggtcaatgatgatgactcaaatgaactgaatgtgttgcataatcttgagatgccaatccccacaagatacattaccaaatgcaagcacatagggtgtaaatggcgtattcatgcctctaagcttcatgatgacagaattatccaaaggctatcgtttccacatgaatgcccaacaaccaagctgatggaaggaaagatggccagtcaaggatggattgcagataggttgtctgattggttaaagaagaatccccagagaggccccaaggatgcaaaggaaaagttggaagagaaatatgagataaaggtaaagtattctaaagcatggttaggtgtgtatgtggcacttgaccaaattcatgggaagtatgaggaaaattttcagctattgttcaactggaaggcagagattgagaagaaatcaccagatgggttcttgaatggctgtaagccctacattggtgtagatgcaactaggttaactgaaattgaggcagctccaaggaagaggtactacctacttatcttgcataaattgtgtattgccaattaccatgtggctaacatgtag</cdnaseq>

Protein Sequence

<aaseq>MAIVVDSELMANPNPLEPLCVVPPTHSARGLSASKVADSTESST SETKLLVLICVVPPIQTGQGAFVSEVTVSTEPATKEAYGTLPNVFDNVEEYICVNGKG LYIDVPPIPSTDGAEPSVPTQTYGPSETFGVAEPYAEVEVNDDDSNELNVLHNLEMPI PTRYITKCKHIGCKWRIHASKLHDDRIIQRLSFPHECPTTKLMEGKMASQGWIADRLS DWLKKNPQRGPKDAKEKLEEKYEIKVKYSKAWLGVYVALDQIHGKYEENFQLLFNWKA EIEKKSPDGFLNGCKPYIGVDATRLTEIEAAPRKRYYLLILHKLCIANYHVANM</aaseq>

Gene Sequence

<dnaseqindica>1..477#581..670#791..1073#1158..1214#2327..2412#atggctatagtggttgatagtgaactcatggctaatcctaatcctttagagccattgtgtgttgttccacctactcatagtgcacggggattatctgcatctaaagtggcagattctaccgaatcctcaacctcagaaacaaaactcttagtgcttatatgtgttgttccacctattcagacagggcaaggagcatttgtatctgaagtgacagtttctactgaacctgcaaccaaagaagcatatgggacattgcctaatgtgtttgataatgtggaagagtatatatgtgtcaatggtaaggggttatatattgatgtgccacctattccatctactgatggtgctgaaccctctgtgcctactcaaacttatggccctagtgagacttttggggttgcagaaccttatgcagaggttgaggtcaatgatgatgactcaaatgaactgaatgtgttgcataatcttgagatgccagtaattgaaaaggatgcttgttttcctaacatgataacatttagacaagctattaggcactttgttgttacccaaggatttgagcttgctaatattcaaacagatccccacaagatacattaccaaatgcaagcacatagggtgtaaatggcgtattcatgcctctaagcttcatgatgacagaattatccaagtatgtgttacatatttgacccaagttgtttagttttgatcatatccgagcatgttgtttacttttcatcatgtttgatcatattgttctgttttgttatgcttgtatgcacatataaagaggctatcgtttccacatgaatgcccaacaaccaagctgatggaaggaaagatggccagtcaaggatggattgcagataggttgtctgattggttaaagaagaatccccagagaggccccaaggatgcaaaggaaaagttggaagagaaatatgagataaaggtaaagtattctaaagcatggttaggtgtgtatgtggcacttgaccaaattcatgggaagtatgaggaaaattttcagctattgttcaactggaaggcagagattgagaagaaatcaccaggtacacttgtgaacattgaattgcagaaagtagggaagaaaatgtgttttagtagaatgtttgttgatttcaaaccatgtgtagatgggttcttgaatggctgtaagccctacattggtgtagatgcaactaggttaactggtaaatacacaggacaactagcatatgctacatctgttgatggtcacaattggttattctacatggcctttgctatttttgattcagagacagatgataattggtcatggttcatgcaacaactgcatgcagctataggttcctctagtgacttaagttatttcaattgatgcatgtaaagggttagagaaagctgtaggtgttgtctttaaaaaagttgaacatagggagtgcatgagacatctgtatagtaacttcatgaagaaatattgtggacctatcttcacacaacacttgtattctgctgcaagaagctttatagaagatggatttaggtatcacacagaacaagtttataagctgccctaggtgttgtgaaatacttagaagaacatcactcaagaatctggtataggtgtgggttcaaagaaacatgcaagtgtgactacttgaccaataatgtattcgagagttttaacaatcagatcaaaggaatgaaaaggctacatcttcataagttagttgattctttgaggaagctcatgatgaagaagatgtgcctaagaagacaagttggcaaaaagttgcctgatggtatcttgccaaatgtcattaaggagctgaatgcaacaagtaacaatttgagggtggtgaagatagctagacctgatgatgacatggcagtgatggcatttgttgatgttgacaaccaggctgggaggcatatagtgcacttgacaaacaaaacttactcatgcataaagtggtaggtatcaggcaagctttgcaatcatgcattaacatggatttgttccaacagaggtgtacaaatttcttattttgtgaatgattgctattttgtggccaagtttagggcatcatatgcaggtagagtaccaactatgctagatagaacacaatggcctgtgtaggatctaggattcaaagtgtgagaacctaagctcaagaggattgctggaaggcctagagttcagaggattaggggtgcacttgagccgggactagaagggtgagatgcaaaagatgtggagggtttggtcattttcagaagacttgcaggcttgctaaagcacatgatgatggtgatgcagaaattgaggcagctccaaggaagaggtactacctacttatcttgcataaattgtgtattgccaattaccatgtggctaacatgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0168500, RefSeq:Os12g0168500