BGIOSGA036080

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Revision as of 08:15, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036080| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036080, complete gene.| tag = OsI_385...")
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Gene Name

BGIOSGA036080

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036080, complete gene.

LocusTag

OsI_38556

Ensembl Transcript ID

BGIOSGA036080-TA

Ensembl Protein ID

BGIOSGA036080-PA

Length

5359

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:16547927..16553285

Sequence Coding Region

16553162..16553285,16553033..16553082,16552662..16552748,16552242..16552334,16552075..16552163
,16551891..16551969,16551526..16551608,16551285..16551363,16550590..16551205
,16550482..16550509,16548889..16549206,16548370..16548483,16548214..16548310
,16547927..16547947

Genome Context

<gbrowseImage1> name=IndicaChromosome12:16547927..16553285 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:16547927..16553285 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGTCGTATATGCTTTTCGGGAGAAAATGAGGGTAGTACAAAAGCTGCCAAAATGCTTCCATGCAAACTCTGCAACAAAAAGTATCATAGAAGTTGTTTGAAAAACTGGGGGGAACATAGAGATCTTTTCCATTGGAGCTCATGGGTCTGCCCCTCTTGCCGCAGTTGTGAGGTGTTACTAGACTGGAGTCTTGGATTTGATGTCAATCTGGCCAAGACGTTGGTTTGCGGGGTCACTGGTCCAACCTCTGGGTCATCGGTATGTCGACGACCTGGTGATCCCAACAAGTTAATGTTCTGTAAAAGGTGTGATGGTGCTTATCACTGCTACTGTCAGCAACCGTCGCACAAGAATGTTACCCATGGACCATACTTATGTCCAAAACATACAAGGTGTCACAGTTGTGGATCTGGTGTACCTGGGAGTGGCCATAGCACAAGGTGGTTTCTGGGTTACACATGCTGTGATGCTTGTGGACGATTATTTGTGAAAGGAAACTACTGTCCAGTTTGCTTGAAGGTTTATAGAGATTCTGAAGTGATACCAATGGTTTGTTGTGATGTTTGTGAAAAGTGGGTACATATTGAGTGTGATGGCATCAGCGAGGAAAAATACCAACAATTTCAATCGGACCAAAACCTTCAGTACACATGTGGAGCATGCCGTGGCGAATGCTCCCAGATTAGGGACACAGAAGATGCTGTTAGGGAGCTTTGGAAGAGGCGGGATGTAGTTGATCATGACCTTATGGCTAGTTTAAGGGCTGCTGCTGCACTGCCTTCTTTGGAAGATGTCTCACCATCTCATCCTAACTCAGATGATGAAAAACTTGGTGCATATGTAATGAAAAATGATGGTAGAAACACACTCAAATTCTCTTTCAAAAGCAACAGTACTAAGCCTGCGTTAGATTCATCTGAACAAGAGAAGAATGCTATCAAGAGCTCAGGGTCAAATAAGAAGCATTCCAAGAAGAAAGGGAATCAAAATAATAAAACAGTTAGCGAGCAGGATGAGATATTTTTGGAGAAAAGGAATGAAACTAAATCATTGGGTAGTTTGGGAGATCAAATTGCAGATGTTACTCGTGATAAGAGTTCATTTAAAAATGATGCCGATGCGTTTGTGCTGTCTTCAGCTCAAAGTGCAGAGAAGGCTTTGAAATTACAATCTGCCAAAGCTGCAGCACATAATGCTGATATGATACCCAAAGTCAAGATTAAAGGAACTAAGGTTCCGAGTTTGCATTTCAAGGATGTAGGCGAGGAAAATGCTGCCAAGAGTGACACAGGGAAAGAAAGAGCAAGAGCTGGTTTCAATACATGCTTGAAGCCATCATTGCTCAAGCTTAAATTTAAACGTCCAATTTTTGAGCAGCCAAGCACTCAGTCTTCTCAACCAGAGGAGCCGGGCACCTGGGCTTCACCGCAAGAGGAGTTAAATGTTGCTAAAGGCCAGAGATCAAAGAGGAAGAGACCTTCATTAGACAAGATGGATGGTTCGGAAAGTAAGGCTCCAGCTGCCAAGAGACATGAGCAGAGCACAGGAGAAGAAGCAATGGATGCGAACTGGATCCTGCGCAAGTTGGGCAAGGATGCGATTGGGAAGAGGATTGAGGTCCAGCTAGCTTCTGATGGCAAATGGCATCAGGGGGTAGTCTCGAATGTAATCAATGGCACTTTGTGCCTTCAGTTAGATAATGGTAGGTCTGAGAACATAGAGCTGGGAAAGCGGGCAATCCGCTTGATAGCACAAAGTCAACTTCCTGCCACCAGGGTAGTAAGCAGACCTCTCCAGGCTCCAGCATTTGGATTGTCGCAGTCTCTGATTCATGGGAGATTGGGAGGTCTGAAGTTTACCCAGAATTCCCTGTGA</cdnaseq>

Protein Sequence

<aaseq>MCRICFSGENEGSTKAAKMLPCKLCNKKYHRSCLKNWGEHRDLFHWSSWVCPSCRSCEVLLDWSLGFDVNLAKTLVCGVTGPTSGSSVCRRPGDPNKLMFCKRCDGAYHCYCQQPSHKNVTHGPYLCPKHTRCHSCGSGVPGSGHSTRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSEVIPMVCCDVCEKWVHIECDGISEEKYQQFQSDQNLQYTCGACRGECSQIRDTEDAVRELWKRRDVVDHDLMASLRAAAALPSLEDVSPSHPNSDDEKLGAYVMKNDGRNTLKFSFKSNSTKPALDSSEQEKNAIKSSGSNKKHSKKKGNQNNKTVSEQDEIFLEKRNETKSLGSLGDQIADVTRDKSSFKNDADAFVLSSAQSAEKALKLQSAKAAAHNADMIPKVKIKGTKVPSLHFKDVGEENAAKSDTGKERARAGFNTCLKPSLLKLKFKRPIFEQPSTQSSQPEEPGTWASPQEELNVAKGQRSKRKRPSLDKMDGSESKAPAAKRHEQSTGEEAMDANWILRKLGKDAIGKRIEVQLASDGKWHQGVVSNVINGTLCLQLDNGRSENIELGKRAIRLIAQSQLPATRVVSRPLQAPAFGLSQSLIHGRLGGLKFTQNSL</aaseq>

Gene Sequence

<dnaseqindica>1..124#204..253#538..624#952..1044#1123..1211#1317..1395#1678..1760#1923..2001#2081..2696#2777..2804#4080..4397#4803..4916#4976..5072#5339..5359#ATGTGTCGTATATGCTTTTCGGGAGAAAATGAGGGTAGTACAAAAGCTGCCAAAATGCTTCCATGCAAACTCTGCAACAAAAAGTATCATAGAAGTTGTTTGAAAAACTGGGGGGAACATAGAGGTAATAAAAAATGTCTCATTTTACTACCTCTTTGAATACTTTATTTTATAAGCCTTTGACAAGTTTATGTTCCATCTAGATCTTTTCCATTGGAGCTCATGGGTCTGCCCCTCTTGCCGCAGTTGTGAGGTTAGTTGTCTGTATATTTAAATTGTGTTTCACACCTTTGTATTTTTTTTTCTTTGCCTCCAGAAGTACCTTATCCAGTAAAGTTAAGCTTTGTTTCCTGTGGAAACTTCACCTCTTCAAGTTAAAGGGCTGCAAAGTTAGGCCATTTACTGTACTTGAGGGATCTAGTGCCTATACACGTACCAGCTGTTATGGTGGCCATGCATTCATGTTAATGTCGAAGTGCACTCCCCCCATTTCTTCATGTAGATTATCATTTGTTTTTCATGCCATTATTCTAGCAGGTGTTACTAGACTGGAGTCTTGGATTTGATGTCAATCTGGCCAAGACGTTGGTTTGCGGGGTCACTGGTCCAACCTCTGGGTCATCGGTTGGACCGCTTGTGCCATACAATATTTATCATCCTATATCATACATAGTTCACCATTTGAACCATGAATGGATGGGTGGGAGATCTGGGATTCGAGTCCCAGCATTGCATTCCATTTTTGAAAAATGGAGCCGCATGTCCACCATGGATTGAAAAACTGCTGGTTGAACTGGAATTTTGCCGGGTCAATTGCTTAACTGGTCTTGCTGCCTGGACCATCCTGGCTCAGGTGCCTGGAACAGCTGGGCTTGTCCAGGTCTAATAACACTGAATTCTACACTAGCATCTCAAATGTTTTTATACCATAACTACTTGTCATACGTACAGGTATGTCGACGACCTGGTGATCCCAACAAGTTAATGTTCTGTAAAAGGTGTGATGGTGCTTATCACTGCTACTGTCAGCAACCGTCGCACAAGGTACACCTTCATCCCCCCTTTTCTATTGTTTTAATCTATGGCTCATACCTTAGCACTGCACAACATGTAATGTTTCAGAATGTTACCCATGGACCATACTTATGTCCAAAACATACAAGGTGTCACAGTTGTGGATCTGGTGTACCTGGGAGTGGCCATAGCACAAGGTACTGATTCAAACAATTGATCATAATTTTATTTATCTTTTTGGCAAGTCATGATCACCAGTTGTCTAATGCCTTTTCTGCAACATTATGAACGTGGATATACAGGTGGTTTCTGGGTTACACATGCTGTGATGCTTGTGGACGATTATTTGTGAAAGGAAACTACTGTCCAGTTTGCTTGAAGGTAACCCCTTCCGAATTTCTTATTGTTGACATAGTTACGTCTATGATGGCTTCGCCAGTGACATAACTTTGTTTTGGCCTGTGACATTTGTTATTTCCTGTTCAATTTCAGTGATTGTGTATTCCTTTCTCTCTTTCTATGCTCTATAGCTGAATGTCTTTTTGATTGATACTTCATTTCTGTGGCTGAGTCGAGAGTGTATAATTTAAGCTGTAATGTGCCCTTACATTTTATTAACTTCTATTTATATGCTTGTCTGTTCTTTCGGTTCCCTCCTTTCAGGTTTATAGAGATTCTGAAGTGATACCAATGGTTTGTTGTGATGTTTGTGAAAAGTGGGTACATATTGAGTGTGATGGCATCAGGTGTGTATGATTATCGAACCCAATTTATTTTGTTTGAATAGATGCTCTGATATTTTTTCCCTCCATATGTACTGCTTCTTGCCTTAATATGTCAATTCTCTATATGTATGTACCATCTTCTGTCGATTGCCTCACCATCACATCATTTCATGTATTGTGCAGCGAGGAAAAATACCAACAATTTCAATCGGACCAAAACCTTCAGTACACATGTGGAGCATGCCGTGGCGAATGCTCCCAGGTAAATTTTACTTCTCCCATATTTTCCATTGATATAGAACTGTTGTTTTTCTAACACCCTTTTTTCTTGCAATCTTCAGATTAGGGACACAGAAGATGCTGTTAGGGAGCTTTGGAAGAGGCGGGATGTAGTTGATCATGACCTTATGGCTAGTTTAAGGGCTGCTGCTGCACTGCCTTCTTTGGAAGATGTCTCACCATCTCATCCTAACTCAGATGATGAAAAACTTGGTGCATATGTAATGAAAAATGATGGTAGAAACACACTCAAATTCTCTTTCAAAAGCAACAGTACTAAGCCTGCGTTAGATTCATCTGAACAAGAGAAGAATGCTATCAAGAGCTCAGGGTCAAATAAGAAGCATTCCAAGAAGAAAGGGAATCAAAATAATAAAACAGTTAGCGAGCAGGATGAGATATTTTTGGAGAAAAGGAATGAAACTAAATCATTGGGTAGTTTGGGAGATCAAATTGCAGATGTTACTCGTGATAAGAGTTCATTTAAAAATGATGCCGATGCGTTTGTGCTGTCTTCAGCTCAAAGTGCAGAGAAGGCTTTGAAATTACAATCTGCCAAAGCTGCAGCACATAATGCTGATATGATACCCAAAGTCAAGATTAAAGGAACTAAGGTTCCGAGTTTGCATTTCAAGGATGTAGGCGAGGAAAATGCTGCCAAGAGTGACACAGGGAAAGGTACCAAGTTGGTTATTCATATCGGTTCACGACACAAAAGTAGGAGTGGCTCTCCCAAGTCTGAAATGTCCAATTCTCAGAAAGAGCAAGAGCTGGTTTCAATACATGGTACGCCCCTATGTAGTGTAGTAGTTTTGTGTTTACCATTTGGTTTGCCTACTATAATATATATTTGGAATGCACGTATGTTCTATTTTACAAAATTGAGCTGTCATTAAGGTTATTATATGTGTAGGTATAACATTATACTAGCAACTCGGTGACACTTCTATAGTTGTATGGATGTCCTTTTTTACACATAGAGGAATTGCTGCATGCCTTTTTTGTTAGTATCTCTGTTCCATTTATTTGTTGTTTCGGTCATTGACACAGTTTCTATACACCCATTTGGCCATTACATTTCTTATTATATTATTAAAAGCAATGGTACACAAGCATTTCATGAAGAATCGAGTGGTATATTTGTCATATGGAAATTCTAGGCAGCTTCATATATTATCTACTCATTTTAAAAACAAGTTAAAGGTTAATGCTGCCATTCTAAAAACAACACAAATTAAAATAGAATGTTGATTCTGCTTAGCACATCCTGATTCTCTACAAAGCCTGATGGTGACCATGTCATCAACAAATATTAGCTGTTTGATCATTTAAGCCTGTGTCTGATCAGGCGCTCCTATCATTTGTCTCGCCATAGTTTAAAGTTGGGGTTTATTCACTTCATATCATTTCTATTTATGAAAACCCAATTTTCCTTTTTATATGTCATCCCTGAAGTGGCAATCACGACATTGGTCAATGTGTGTTTTATGCCTTGCATGTACTAATAGTTTTAATCAGCTTCGCTGTCTATCCTTTATTCTTGTTTATTTTTCTGATTTTTTTTACCATCTTAATGCTCCTGCACTTGGTTCATTGTTTGCTTGTAACCAGTAGCCCATGATTCTTTGTTGATGTTCTTGTTCTAATAAATAAAATACTTAAGCCCTTTAATAATGGTTAACAGTGCAAGATTTCTCAGGTCTAGTTCAGGTTTTGCTCCCTTGATAATTGATCTCATATTGAAGAGTGATAACTTGATATTTGCTATTTCAGGAGGGAAAGTTGATGTGACAAGCCAGTTCAAAAGCTCTAGAAGTGAAATAAAAGAAAAAAGTGTAATGAAGCTAGTTAGAGAGACTGGAGTACAACAAAATAGCCTTCTAGGAGATCTAGGTGCTTCAAAAAAGCATGCAACCGGAAAAAGGAGCAATGCTATAGTTTCTGCAATGGAAAATGCAAGTGAAAGTGGTACCAGAAGCAGATCGTTTGGACAAAAACAATCTGTTATCATCTGACTGAGAACAGGAATGCTTCATTTTCTGTGAACAACTCTCCTGACAGCTTGAAGCCATCATTGCTCAAGCTTAAATTTAAACGTCCAATTTTTGAGCAGCCAAGCACTCAGTCTTCTCAACCAGAGGAGCCGGGCACCTGGGCTTCACCGCAAGAGGAGTTAAATGTTGCTAAAGGCCAGAGATCAAAGAGGAAGAGACCTTCATTAGACAAGATGGATGGTTCGGAAAGTAAGGCTCCAGCTGCCAAGAGACATGAGCAGAGCACAGGAGAAGAAGCAATGGATGCGAACTGGATCCTGCGCAAGTTGGGCAAGGATGCGATTGGGAAGAGGATTGAGGTCCAGCTAGCTTCTGATGGCAAATGGTGAGCTCTTTATCCTGAATTTATGATACCACTTTGTTATTACACTGTAATGTCAAGTATATCAACACTTTTATTCTCATTAAGTAATTGTTATCCTTCTAGTCAGGTAATGAACTAAAATGGGCTGTATTGGGCCCTGAACTCATTAGTAATTCTTAGCCATCTACTCAGCTCACAAACTATTATTTGGTATTTTTCCTTGTACATTTGTTTGGTCCATTGGCACTAACACAATTAGCCTGTGTTCATTGTAATCTTCCCGAATAACCTTCCTTTTTTTATCCATGCATTTTATTTATTGTTAAAGGCTAATTCATTGATGGACTTAGTTAACTTTCATGGCATCAAGACTTTATGAATATGACTGCAGGAAATTGATGACTAAAATATTCCTTTTTTTGGCAGGCATCAGGGGGTAGTCTCGAATGTAATCAATGGCACTTTGTGCCTTCAGTTAGATAATGGTAGGTCTGAGAACATAGAGCTGGGAAAGCGGGCAATCCGCTTGATAGCACAAAGGTCAAAGGGCGGAAAGCGATGAACCCATTTTGCGCCTGCCTCCCTGTTCTTGCTCTCAGTCAACTTCCTGCCACCAGGGTAGTAAGCAGACCTCTCCAGGCTCCAGCATTTGGATTGTCGCAGTCTCTGATTCATGGGAGATTGGGAGGTCTGAAGGTCTGCCGTTCTTGCTGCCTTAAGCTGACTGGATGAGACGTAGAAATGCAACATCATCCGTTGCGCGGTGTCTCACTAGCCTAGCATGTAACAGACTAGTTTTTTTTTTTGTCCTGCTGCATGAAGCGCATGGCTTCATTTTGACTTCTGGTAGTGTAGGAACAAACAACTGGGAAGGCTTTTTAGGGGCCACCCTGGATGTAGAAGAAATGCCAGATGATGGCCATGTACATGTAGCTGCTGAATGAGTTCTTTTTTTTAACCAGTTTACCCAGAATTCCCTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036080

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA036080&oldid=52385"