BGIOSGA036091

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Revision as of 08:15, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036091| Description = BGIOSGA036091| Definition = Oryza sativa Indica Group BGIOSGA036091, complete gene.| tag = | tid = BGIOSGA036091-TA|...")
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Gene Name

BGIOSGA036091

Description

BGIOSGA036091

Definition

Oryza sativa Indica Group BGIOSGA036091, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA036091-TA

Ensembl Protein ID

BGIOSGA036091-PA

Length

3357

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:16255858..16259214

Sequence Coding Region

16259195..16259214,16258779..16258818,16258563..16258652,16258072..16258145,16257857..16257986
,16256888..16257250,16256689..16256810,16256496..16256580,16256255..16256300
,16256054..16256162,16255858..16255936

Genome Context

<gbrowseImage1> name=IndicaChromosome12:16255858..16259214 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:16255858..16259214 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTGTGGGGGTTGGGGGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCTCCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATAGATATAGGCAATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACCATCAAAATTTTGGACAAACTAACTCAGACTTGGGTTGTACCTACAGTACTTGGGGCACCTCCAAATCCAACCAGCTCACACTCAGCGGTTCTCGTAAACAATGAGAAGATACTGATTATTGAGAAGGGTGTTCCCTTGAATGATTCTATCTGGTTCCTTGAGGTAGACACTCCTTTTGTTAAGCAGCAGAGCAAAATTAAGGGCACAGTTGTTGTTGCATGGAGCAAGGGAGTAATTGGTGAGGGCCAAAAGCCAATTGTGATTAGCGGGCCTTCTGGTGTTGGTAAAGGGACATTAATTGCAAAATTAATGAAAGAATATCCATCAAAGTTTGGATTTTCTGTTAGCCACACCACAAGAGCTCCAAGGGAGAAAGAAATAGATGGAGTTCATTACCACTTCACAGAACGAAGCAAGATTGAGGAAGAGATAAGTGAGGGCAAATTTCTTGAGTTTGCTCATGTTCATGGAAATGTCTATGGCACTAGCATTGAAGCAGTTGAATCTGTTACTGATGAGGGGAAGAGGTGTATTCTCGACATTGATGTCCAAGGAGCTCGTTCTGTGAGGGCTTCTTCTCTTGAAGCAATATTCATCTTTGTATGCCCTCCATCGTTCGAGGAACTAGAGAAGCGCCTTCGGGCACGGTCGTATAGTAGCGGTGAAACGTGTAACACTATGAGAGTAGTCGACACACTCCAGAAGCGACTGAGGAAGTGNNCATCGNTTGGCAAGTTGCTTTCTTTGGATGATGACCACGAAGATTCAAATGATTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGAACCACAAACTTGATATCGCTCGACTTGTCGTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAG</cdnaseq>

Protein Sequence

<aaseq>MVVGVGGIGGASALITAHFMGEEAPEFRVESVALESKDCLQNAIDIGNKTYVISRSDDPKSSITIKILDKLTQTWVVPTVLGAPPNPTSSHSAVLVNNEKILIIEKGVPLNDSIWFLEVDTPFVKQQSKIKGTVVVAWSKGVIGEGQKPIVISGPSGVGKGTLIAKLMKEYPSKFGFSVSHTTRAPREKEIDGVHYHFTERSKIEEEISEGKFLEFAHVHGNVYGTSIEAVESVTDEGKRCILDIDVQGARSVRASSLEAIFIFVCPPSFEELEKRLRARSYSSGETCNTMRVVDTLQKRLRKXXSXGKLLSLDDDHEDSNDSFIKDGKETACYSILSKTNSEILLQSETNEAEKGTTNLISLDLSSLSGGAPGRTRGLKISPVN</aaseq>

Gene Sequence

<dnaseqindica>1..20#397..436#563..652#1070..1143#1229..1358#1965..2327#2405..2526#2635..2719#2915..2960#3053..3161#3279..3357#ATGGTTGTGGGGGTTGGGGGGTGTGTGCTTCTGTTGTTTGACTAACTATTGCCGGATATATTACTATTAGTGCTTGTTTTTGTTCTTGTGTGGATCTAGCTTTTGGAATGGTGATGAGTCATGTTGGTTTAGTGTGGATTGGTTTGTGGTTAAGTTTGTGCTCTCTGTGGATTGGTTTGGTCTTGAAATGTGGGGGGTTCAGGGGCTTGGTTTAGTGGTTGGGGGGTGTTTGGGTTCTTGTTTTGGTATGGTATGGTGGTGGTAGTTCTTGAATGCTTACTATGGATAGATGTGTGTGGGAATGGTGTCTTCAATTCAGTCTCCTTGTATTAGTAACCAGAATGTGTATTCTTGTATTATGTTCTAATTGTTCGGTTGTTTTATTTCTGTATATAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGTGAGTTTAGCTGTGGTGGATATTTCAGGGGCTTGCCAATGTGCTGCTTATTATGTGTGGATGCCAAGAAGAGTTTGTTAAGGGGACCCGCATGCTTAACTTGCTCTGGTTTTGATTTGGCCACAGGGTGAAGAGGCTCCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATAGATATAGGCAATAAGACGGTAAGTTGAATTAATAGGTTCATTTATGTACTGTAACTTTGGTTTGATTTTACATACCCATGATGGTTGTCCTCCTTGTTTGAGATGCTAGGCTGTGTGCTGTCACTTTGTGTTATGTTGCTTGAGTTTAAGAAAACGTGTTCGTAGCAATCTGTCACCACTGATAAATAGCGCCACTATTCATTAAAATTAACTATGCTGATAGTGTTGCCTTTTCTTTTGAACATGACTGATAATGTTCCTAATATCAAGTCAAGTTTATATCTGTCTTTGCTCATTCTTAGTTGGACCAGCTAGTACTATTGACAGTATTTAACGTAAGTAAAGCATACTCCCCTGTGTATTGTCAATCGGTGTTAATCTTACTAGGGAGTACTCTAAATTTATATTGTAACAGCATGTTCTTGCTTTTTGCAGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACCATCAAAATTTTGGACAAACTAACTCAGACTTGGTACGTGTTCTGTCATTTTGGTTTGCGATCTCTATTTACTGTGCTTTCATTTTGGTAGTTAGTCACTCCCATTGTGTTTATGCAGGGTTGTACCTACAGTACTTGGGGCACCTCCAAATCCAACCAGCTCACACTCAGCGGTTCTCGTAAACAATGAGAAGATACTGATTATTGAGAAGGGTGTTCCCTTGAATGATTCTATCTGGTTCCTTGAGGTAAAGCTGGAAAATTGATGCAAGCGCTCTTCTTTTCTTTACTTCTGTTCTCTTTTAATTTACGGAAAGTAATTAGTTTTTAGTTAGCACCAAGGAAACTGCATACTCTTATGGTTTCCTTTCATACAAACTTAACAAGAAAATAATTTTCTTGCTGTTCCTGTAGACTCTCATGCATATTGATTGTTCTATAGTTATATAATATATGGTATATAATAATGCTACTTCCGTCTCTTGTATTACTTGTAAGCTAGAAGTCTATTCTTTTATTCATGTCATAACATTATTATGTTAATCTGCTGGTGTGGTGCATTATGCCAGTTTGTTAATCTGAAAGTGTATATTTTTCGTTCACAAGATGCTAGCTCAGGGGTCTTTTGTGTTTCATATTTTCTGCATTGACCTGAAAGCATGGTTTCTCTTTCACTAGATGCCAGCACAAGGGTCTATTTGTGTTTCATGATTTCTGTGTGCTTTCTGTCTAGAGGCCTAGGAGTATATTGTATTCTCAGTGCACTTGATCAGTATACTTATCTCCTTTTCTTTTGCTTTTCCAATATTCACCTTACTGAGATGGCATGGTTTCTTCTGCTTTGTTTATTTTAGGTAGACACTCCTTTTGTTAAGCAGCAGAGCAAAATTAAGGGCACAGTTGTTGTTGCATGGAGCAAGGGAGTAATTGGTGAGGGCCAAAAGCCAATTGTGATTAGCGGGCCTTCTGGTGTTGGTAAAGGGACATTAATTGCAAAATTAATGAAAGAATATCCATCAAAGTTTGGATTTTCTGTTAGCCACACCACAAGAGCTCCAAGGGAGAAAGAAATAGATGGAGTTCATTACCACTTCACAGAACGAAGCAAGATTGAGGAAGAGATAAGTGAGGGCAAATTTCTTGAGTTTGCTCATGTTCATGGAAATGTCTATGGCACTAGCATTGAAGCAGTTGAATCTGTTACTGATGAGGGGAAGGTAAAGTTATTACTCTTTTTTCATGAAAACTTCTGAAAGGTGAATTGCTACATCTTTCCATTGCTTTTTCATTGAAGAGGTGTATTCTCGACATTGATGTCCAAGGAGCTCGTTCTGTGAGGGCTTCTTCTCTTGAAGCAATATTCATCTTTGTATGCCCTCCATCGTTCGAGGAACTAGAGAAGCGCCTTCGGGCACGGTATATTTGTAGTTTACGAAATGCAGTGATAGCCTAAGCTCATGTACTTGATTATTCAATTCCTTGAACCATTACTGAACATAAATACTTTTTGATTTATGCNACTAGGTCGTATAGTAGCGGTGAAACGTGTAACACTATGAGAGTAGTCGACACACTCCAGAAGCGACTGAGGAAGTGNNCATCGNTTGGCGTGAGGGCNTTTGGAGCGCCAGNTCCCACATTCACCAGGTCTTTTCGATCATCTTTTGGTAAATGATGACCTTGAAGCTTGTTATGAAAATTTGAAGGTAATTAACCTTGTGCCTTGGCTGCATAAACTTTCCTTGTGAGAGATGCTTATTGCAATACGCTGTTCTGTTCCTTAATTTTTACCTGTGACCTGCAGAAGTTGCTTTCTTTGGATGATGACCACGAAGATTCAAATGATTCTTGTAAGAAACATGAGCTTTTACATTTTTCCTTCCATTTTATTATTATTAGTGTTTCATCATAAATCTGATAGTAACTTTCATTATGGGATCAGTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGAACCACAAACTTGTAAGCCATTTCCCCCTAACTTTATGTATGGTAATGATAGCTGATTCGCCTTATTTTCAAGCTAATGATAGCTGAAAAGCTGATTACACGATCTTCTCTCTATTTGTATTCCTACAGGATATCGCTCGACTTGTCGTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036091

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA036091&oldid=52396"