BGIOSGA036094

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Revision as of 08:15, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036094| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036094, complete gene.| tag = OS12G05...")
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Gene Name

BGIOSGA036094

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036094, complete gene.

LocusTag

OS12G0514500

Ensembl Transcript ID

BGIOSGA036094-TA

Ensembl Protein ID

BGIOSGA036094-PA

Length

5677

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:16126252..16131928

Sequence Coding Region

16131788..16131928,16131226..16131429,16131061..16131134,16130798..16130923,16130625..16130718
,16130441..16130524,16130168..16130311,16129974..16130087,16129839..16129895
,16129682..16129756,16129452..16129556,16128645..16128776,16128462..16128554
,16128281..16128358,16127937..16128191,16127406..16127508,16126957..16127131
,16126772..16126877,16126599..16126688,16126252..16126437

Genome Context

<gbrowseImage1> name=IndicaChromosome12:16126252..16131928 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:16126252..16131928 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTCGGGGCCTCGAGGCGTTCCGTCTGCACCGCCGCGGCGGCGGCGGCGGCCGGGTCACGCCGCCGCGCCGCCGCCGGCGTCGCCTCCGCCGTTTCCGGGGATTCCTCCGTCTCGTCTTCCTCGGCGCCCCCACGCTCGGTGATTAATGGGGAGCCTGGTGTCCCTCAGCTTCAGAAGAGGTTGCTCTCTGTGCTTGCTGCGCCCAAGCTTACCAGGACCGACAATGCTGCCTCCCTCAAGTTGAGGGAGGGTTCCCTTGTTGGCAGGCGATATGAATCGAGTGCTGCAGCAGTTGATTCTTCTGATACGCCACCTGTGGAGAAGCATGAGTACCAGGCAGAGGTCAATAGGCTCATGGACTTGATTGTTCACAGCTTGTATAGCAACAAGGAGGTGTTTCTTCGAGAGCTTGTCAGCAATGCAAGTGATGCACTTGATAAGTTGCGGTATCTTAGTGTCACTGATCCTGATCTTATAAAGGATGGTGCTGGTCTTGACATTCGCATCCAAACAGATAAGGAGAATGGAATAATAACAATCACTGATACTGGGATTGGTATGACGAGGCAAGAACTTGTTGATTCTCTTGGAACTATAGCGAGCAGTGGAACTGCCAAATTCCTTAAGGCACTAAAGGAGAGCCAAGAGGCTGGTGTTGACAGCAACTTGATTGGTCAATTTGGTGTTGGATTCTATTCTGCGTTTCTTGTTTCTGATAAGGTTGCAGTGTCAACTAAGAGCCCAAAATCTGACAAGCAATATGTTTGGGAAGGCGAGGCAGAATCTAGTTCTTACACCATTAGAGAGGAGACAGACCCAGAGAAGCTCCTTCCTAGGGGAACTCGCCTTACTCTGTACCTTAAGCGTGAGGACAAGGGTTTCGCACACCCTGAGAAGATTCAGAAACTTGTGAAGAATTACTCACAGTTTGTTTCCTTCCCTATTTATACTTGGCAAGAGAAAGGTTACACAAAAGAGGTTGAGGTCGATGAACCTGTTGAAGCCAAAGAAGGCGACGATGAGACTAAAACAGAGGTTAAGAAAAAGACAAAAACAGTTGTTGAGAAGTACTGGGATTGGGAGCTTACAAATGAAACACAACCTATATGGCTTCGGAACCCTAGAGAGGTATCAACTGAGGAGTACAATGAGTTTTACAAGAAGACATTCAATGAGTACATGGATCCCTTAGCATCCTCACACTTTACTACAGAGGGGGAAGTAGAATTCAGATCTATTCTCTATGTGCCTGCTACAAAGAAGGAGGATATAACTGATAGGAAGACCAAAAATATCAGGCTTTATGTTAAGCGCGTGTTTATATCAGACGACTTTGATGGGGAACTGTTCCCAAGATACCTGAGCTTTGTGAGGGGTGTTGTTGACTCAAATGACCTTCCATTAAATGTTTCTCGTGAGATCCTGCAAGAAAGCCGAATTGTGCGTATAATGAGAAAGAGGTTGGTGCGAAAGGCCTTTGATATGATACTTGGCATCTCTTGTAGCGAAAACAGAGATGACTATGAAAGGTTCTGGGAAAACTACGGCAAGTTCTTAAAGCTGGGTTGCATGGAAGACAAGGAAAATCACAAGAGAATTGCTCCTTTGCTCCGATTCTTTTCTTCTCAAAGCAATGAAGAATTAATTAGCTTGGATGAATACGTGGAAAATATGAAACCTGAGCAAAAGGACATTTACTACATTGCTGCGGACAGTTTGAGTAGTGCAAAACATGCTCCTTTCCTGGAGAAGCTCAATGAAAAAGAGTACGAGGTTCTATTTTTAGTTGACCCAATGGATGAAGTGTCTGTCACAAATCTGAACTCCTACAAGGATAAGCGTTTCGTTGATATTAGCAAGGAAGACTTGGACTTAGGTGATAAGAATGAGGAAAAAGAGAAGGAGATCAAGCAGGAATACAGCCAAACATGTGACTGGATCAAGAAACGCTTGGGTGAAAAGGTTGCTCGAGTTGATATATCAAACCGTCTCAGCTCATCACCATGTGTTCTAGTTGCAGCTAAGTTTGGTTGGTCTGCGAACATGGAAAGGTTGATGAGAGCGCAATCTATGGGTGACATGTCATCTCTGGATTTCATGCGTTCTAGGAAAGTTTTTGAAATCAACCCAGAGCATGAGATCATCAAGGGCTTGAATGCTGCCTGCAGAGCCAACCCTGATGACCCAGAAGCTCTAAAGGCTGTAGATATCCTGTTTGAAACTTCTATGATCTCTAGTGGCTTTACACCTGACAACCCTGCCGAGCTAAGTGGGAAGATATATGAGATGATGAGCACAGCTATGGCCAGCAAGTGGGCCTCGCACGCTCAACCCGCTGAGATGAACCTGCAGCGAGACTCACCTGTCAGCTCTGAGCCGATTGAAGCCGAGGTGATTGAGCCGGAGTTGGTGGACGATAGCCAGAAGAAATAA</cdnaseq>

Protein Sequence

<aaseq>MLGASRRSVCTAAAAAAAGSRRRAAAGVASAVSGDSSVSSSSAPPRSVINGEPGVPQLQKRLLSVLAAPKLTRTDNAASLKLREGSLVGRRYESSAAAVDSSDTPPVEKHEYQAEVNRLMDLIVHSLYSNKEVFLRELVSNASDALDKLRYLSVTDPDLIKDGAGLDIRIQTDKENGIITITDTGIGMTRQELVDSLGTIASSGTAKFLKALKESQEAGVDSNLIGQFGVGFYSAFLVSDKVAVSTKSPKSDKQYVWEGEAESSSYTIREETDPEKLLPRGTRLTLYLKREDKGFAHPEKIQKLVKNYSQFVSFPIYTWQEKGYTKEVEVDEPVEAKEGDDETKTEVKKKTKTVVEKYWDWELTNETQPIWLRNPREVSTEEYNEFYKKTFNEYMDPLASSHFTTEGEVEFRSILYVPATKKEDITDRKTKNIRLYVKRVFISDDFDGELFPRYLSFVRGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISCSENRDDYERFWENYGKFLKLGCMEDKENHKRIAPLLRFFSSQSNEELISLDEYVENMKPEQKDIYYIAADSLSSAKHAPFLEKLNEKEYEVLFLVDPMDEVSVTNLNSYKDKRFVDISKEDLDLGDKNEEKEKEIKQEYSQTCDWIKKRLGEKVARVDISNRLSSSPCVLVAAKFGWSANMERLMRAQSMGDMSSLDFMRSRKVFEINPEHEIIKGLNAACRANPDDPEALKAVDILFETSMISSGFTPDNPAELSGKIYEMMSTAMASKWASHAQPAEMNLQRDSPVSSEPIEAEVIEPELVDDSQKK</aaseq>

Gene Sequence

<dnaseqindica>1..141#500..703#795..868#1006..1131#1211..1304#1405..1488#1618..1761#1842..1955#2034..2090#2173..2247#2373..2477#3153..3284#3375..3467#3571..3648#3738..3992#4421..4523#4798..4972#5052..5157#5241..5330#5492..5677#ATGCTCGGGGCCTCGAGGCGTTCCGTCTGCACCGCCGCGGCGGCGGCGGCGGCCGGGTCACGCCGCCGCGCCGCCGCCGGCGTCGCCTCCGCCGTTTCCGGGGATTCCTCCGTCTCGTCTTCCTCGGCGCCCCCACGCTCGGTACGTGCCATCTCCGGCCTTGACTTTCTCTACGGCTGCGGCTGTTTCGGGCTGGTTGCGGGTTCAGAGGGAAAATGTGGGGGCTGGTCGTGATCGCAAATTAGCGGAAATTGAGTGGTGCTTAATCTGTATAGTACTCTTGTTCGCCCATTACGTGGTATCAATTTGAGTTAATTTTGCGGTGTGTGTTAATTCAAGCTAATTCGTTGGTTTAAGTTCATCTTGTTGATTGTGATATTTAATAGTCGATTGGGGGAATCATTAGATTTTTACTGTCTGATTGATTGTTTGAATTGAGTCGAGCCTTTGAGCTTCTGTATGTGATACTCACAACCCACATGTATCGTCCGATTCTCAGGTGATTAATGGGGAGCCTGGTGTCCCTCAGCTTCAGAAGAGGTTGCTCTCTGTGCTTGCTGCGCCCAAGCTTACCAGGACCGACAATGCTGCCTCCCTCAAGTTGAGGGAGGGTTCCCTTGTTGGCAGGCGATATGAATCGAGTGCTGCAGCAGTTGATTCTTCTGATACGCCACCTGTGGAGAAGCATGAGTACCAGGCAGAGGTAACTACTGGAGCAATGGCTAATGTTTTATTTTTCTTAATCAATCTCGTGTTACCAACGGTGTCATGATATTGTCCAATGTGCATGGCAGGTCAATAGGCTCATGGACTTGATTGTTCACAGCTTGTATAGCAACAAGGAGGTGTTTCTTCGAGAGCTTGTCAGGTGGGTGTCATTCAAGAACATAAGTTGTTCACTAATTGAAGTTTGTACTAATCATCATCTTGGTTTACTCTTGTGCGTTTAGTTTGATCTCTATGGTTTAATTTTTTTTAATTTCTTCATCGTGTATCTGTTTGCAGCAATGCAAGTGATGCACTTGATAAGTTGCGGTATCTTAGTGTCACTGATCCTGATCTTATAAAGGATGGTGCTGGTCTTGACATTCGCATCCAAACAGATAAGGAGAATGGAATAATAACAATCACGTAAGTATTAGTTACTTGATCAATTATGTGGCTCCTTTCTTGCAAACTCATGCCTGCATTTGCTCCTTTTTATCTTTAGTGATACTGGGATTGGTATGACGAGGCAAGAACTTGTTGATTCTCTTGGAACTATAGCGAGCAGTGGAACTGCCAAATTCCTTAAGGCACTAAAGGTGTGTTCCATTTGCACTTTGCTGATGTTACCTTCATGTCCTTATTTTTCTTTGTTTCTTATCCTGTCATATTACTAATCTTAAGTATATTATATAATAGGAGAGCCAAGAGGCTGGTGTTGACAGCAACTTGATTGGTCAATTTGGTGTTGGATTCTATTCTGCGTTTCTTGTTTCTGATAAGGTAAGATGCTATCGTGATTGTCTTTAATTAGAAGGTTAATAGCTGGCTGTTAATGACCTAGTGTTTATTTCCCATTGTCCTTGGCTGACATGTTAATATTTCATGAATATTATTTATTTTGTCTAATAGGTTGCAGTGTCAACTAAGAGCCCAAAATCTGACAAGCAATATGTTTGGGAAGGCGAGGCAGAATCTAGTTCTTACACCATTAGAGAGGAGACAGACCCAGAGAAGCTCCTTCCTAGGGGAACTCGCCTTACTCTGTACCTTAAGGTCTATTTGCTTATTTTGATATCATCCAACTCATTTTATACATTACCTGTTTCTAACTACAATTCTCGGTATTGTTTCAGCGTGAGGACAAGGGTTTCGCACACCCTGAGAAGATTCAGAAACTTGTGAAGAATTACTCACAGTTTGTTTCCTTCCCTATTTATACTTGGCAAGAGAAAGGTTACACAAAAGAGGTGAATGCTCTTCCTTTGTTAATTATTTTTTATTGGACCAATGCATCAATTTAATTGTGGCATATTTTGCTCTTTTAGGTTGAGGTCGATGAACCTGTTGAAGCCAAAGAAGGCGACGATGAGACTAAAACAGAGGTAACTGTGATATGCTTTTCTGCCAAGATAAATCTGTTATACTTAATACTTGTGCATAATTGTATTACTATGATATTAACAGGTTAAGAAAAAGACAAAAACAGTTGTTGAGAAGTACTGGGATTGGGAGCTTACAAATGAAACACAACCTATATGGGTGAGATTTGATCTGTTCAGTGTGCTAATATGTTTTTATTAATGAATGCACCCATCACTTATTGAAAATATGAAGGTTCCAAAAAAAAACTGAAGCTTTTTTTTTTCATTCTCTGTTTATGGTAGCTTCGGAACCCTAGAGAGGTATCAACTGAGGAGTACAATGAGTTTTACAAGAAGACATTCAATGAGTACATGGATCCCTTAGCATCCTCACACTTTACTACAGAGGTATGTCTGATTGCATTTGATTAGTTACCAGTTGATTCTTTCTTTTTGTCAATTGAACCAGAATCAAGGTTTATATAGGTAGCAGTGCAGTTATTTTGATGATATGTTCATTGTGCATGACTATTCTATGAAGACAAGTTTTTTTTCATGCTTATACATTTGACAAATTTAACCAAACTTGCGATATCACAGTATTCTGTAACTGCTGTGACCAAATTAATATCTTCATACTATTCTTTCACAAAGAGTCAAAGACACACGAGTGCTATTCATCAGGCAAACATATTTATATACAGGAACAGATAATAGTTCATCCTTCGTTAACACTAACTCAGCTGGTAAAGTTATGTAATACATGTCTATTGCTGCATATGCGACTCTTCATTTCAATTATGGTGGTTCTATTCAAATATTTTTTTGGATATCCACAAGCATGTGAATGTTTGGTTTTGTAACATTGTATTGCATTATTCAGTGAAAATGATATTGTGATCAGTGTGGCAAAGATGCCAAACTGGTTCATCTTTTTGGTTAGAATTGCGCCGATCTCCATGTGATAGTTCATTTATCTTCATGGGTTGGCACCAATATAGCACATCTGTCTATCGCACGGTAAAACTGTGCCTGATTGCACTTCACAGGCTCACTTGGCTGTGCTTGATTTTATTCATGCAGGGGGAAGTAGAATTCAGATCTATTCTCTATGTGCCTGCTACAAAGAAGGAGGATATAACTGATAGGAAGACCAAAAATATCAGGCTTTATGTTAAGCGCGTGTTTATATCAGACGACTTTGATGGGGAACTGGTATGCTTAATACACAGCAGCTCTTCATGATTCTTTGTCAAGTTTTAGATAACCATGGAAATCTGACAATAAAAAAATGTTATTGATCAGTTCCCAAGATACCTGAGCTTTGTGAGGGGTGTTGTTGACTCAAATGACCTTCCATTAAATGTTTCTCGTGAGATCCTGCAAGAAAGCCGAATTGTAAGTGTTAATGAATGGTTTTCTGTCTGTGTCTTGTACATTTCTATCATGATCTTCTAACAATGATTTATCTTTCCTTTTTTTTTTTCCTTGTTTGTTACAGGTGCGTATAATGAGAAAGAGGTTGGTGCGAAAGGCCTTTGATATGATACTTGGCATCTCTTGTAGCGAAAACAGAGATGTAAGTTGTTTACTTTCCTTTTGTGCATGATGCCTCTGCTCTCTCCCTTATCCTTCAGTAGTTCAGTTCTCACCTGAAATTTACTGTAGGACTATGAAAGGTTCTGGGAAAACTACGGCAAGTTCTTAAAGCTGGGTTGCATGGAAGACAAGGAAAATCACAAGAGAATTGCTCCTTTGCTCCGATTCTTTTCTTCTCAAAGCAATGAAGAATTAATTAGCTTGGATGAATACGTGGAAAATATGAAACCTGAGCAAAAGGACATTTACTACATTGCTGCGGACAGTTTGAGTAGTGCAAAACATGCTCCTTTCCTGGAGAAGCTCAATGAAAAAGAGTACGAGGTATGTACTGTGAATAGCTTACCATGTTTGCAGACACATGATCATATTTCTTAATTATATTTTGCTATTGGATTCTGGGCTTTATTGAATGCATTCATTGCCCATGCAAACTTTGCCCTGAAAGGCAAATATAGTTTACTGGCCTTCAGGGCCTGTTGAATTTCATAGTTGAGATGCCTTATATTTTCCCAAATATTGGAACAAACATGCTTGTTTTTGCTACTATCTCACTGACATCTAGCCATCTAGAAGGCTTAAGCCGGAGAACCCAATGGCAAAAACAGTGTTGCAGTACTGCTGAATGGCAAAAACAAAGTTTCTGTATTTGTTTACATGTCTTACTGATTAATGCTTTTACCCAGAAATGAGTTGATTCACTTCATCACTTGTTTCCTTTTTGTGACGGTTCTAACTTGTATATTTTGTAGGTTCTATTTTTAGTTGACCCAATGGATGAAGTGTCTGTCACAAATCTGAACTCCTACAAGGATAAGCGTTTCGTTGATATTAGCAAGGAAGACTTGGACTTAGGTATGCATACACAATCTTTGAAACCTCCTTCTACTGCTGAATGAGATGAGTTTGAAAATAGTTGTTTTGCCACATGAGAATTATTATTGTCCTTCATTATGGCAAGACTTGTTTATATTTCACCCTTTTAATATAATGAATAGAGCCCTGTATGTCTTGTTTATATAATAAATGTAGGCAATGTCTTAACCTTGCAGAATTGGGACAATTACCTCATTTCAGTCGTGTAAATCTTTTTTCCTGATTTCTGATTTTCATCTATAATGTAACTTAGGTGATAAGAATGAGGAAAAAGAGAAGGAGATCAAGCAGGAATACAGCCAAACATGTGACTGGATCAAGAAACGCTTGGGTGAAAAGGTTGCTCGAGTTGATATATCAAACCGTCTCAGCTCATCACCATGTGTTCTAGTTGCAGCTAAGTTTGGTTGGTCTGCGAACATGGAAAGGTTAGTCTCTATCATGTTGACCTTTCTAGCACATAATTCTTGTAACTCAAAGTTCTTAATAGTATTGTTGTGTTAACAGGTTGATGAGAGCGCAATCTATGGGTGACATGTCATCTCTGGATTTCATGCGTTCTAGGAAAGTTTTTGAAATCAACCCAGAGCATGAGATCATCAAGGGCTTGAATGTAAGTGTTCGGTCTGCTGTTTGCACTTCGCGCTTGTAATTTCCTGATAGTCCTTATGGGTTCCTTTTTCCTCCTCAATGCAGGCTGCCTGCAGAGCCAACCCTGATGACCCAGAAGCTCTAAAGGCTGTAGATATCCTGTTTGAAACTTCTATGATCTCTAGTGGCTTTACAGTAAGTACACCTGATTGCCTTCTTTTCCATCAAATAACCCTGGTCCATTTGATATGATAGGATATTCCGCCTTACCGTTGTGCATGTTTTCTATACTGAATGTCGTAATCTGTTTAAATTTCATCAATTTGTGTCATCTCATTCGTGGTATCATATTGCAGCCTGACAACCCTGCCGAGCTAAGTGGGAAGATATATGAGATGATGAGCACAGCTATGGCCAGCAAGTGGGCCTCGCACGCTCAACCCGCTGAGATGAACCTGCAGCGAGACTCACCTGTCAGCTCTGAGCCGATTGAAGCCGAGGTGATTGAGCCGGAGTTGGTGGACGATAGCCAGAAGAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036094