Os12g0168800

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Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0168800| Description = Similar to AG-motif binding protein-2| Version = NM_001072789.1 GI:115487539 GeneID:4351611| Length = 1727 bp| Defi...")
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Gene Name

Os12g0168800

Description

Similar to AG-motif binding protein-2

Version

NM_001072789.1 GI:115487539 GeneID:4351611

Length

1727 bp

Definition

Oryza sativa Japonica Group Os12g0168800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3495008..3496734

Sequence Coding Region

3495126..3495155,3495275..3496489

Expression

GEO Profiles:Os12g0168800

Genome Context

<gbrowseImage1> name=NC_008405:3495008..3496734 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3495008..3496734 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggtggagggcggaataggagagccgcccggattagccagggaaaggcgcctacggctccggcgatctgtggcggcgaccggcgacatggacggcgacggcgacgttggcggcggcggcggcggtggtggtggtggtggtgttaggtacgtcctcgcgctcccggccatggcgtcgctggccgtcctcatcgcccacctcgacgccgccgtgcccgtgccccgtaggcctcgcagctacctcccccgcgccgtgcccatggcgtggtgggccttccggctccccgtcttccgccccccgcctccgcctccgccaccgccggccaagaatccggtcaaggaggaggagggggtggcgcgcgtggtggtggtggtggcgccgccgccgcccgtcgatcccggcgaggaggaggcgggcaagagggcggcgaagagggcgaggaggtgcctgaactgcgacgcggtggagacgccacagtggaggtcgggcccgatggggaggagcacgctctgcaacgcctgcggcgtccgcctcagggcggtcggctcgctgcctgaacaccgcgcgccggcggcgaggacgacgacggccgcccccgcgtcgccgcccgatagcccgatctggacgcccggccacaagccgccctcgtcgtcgcccgacatctacctcgtcaggaggacaccgaagctgccggtgacgcggcctccccgtaccaagcaagctccgcccacagcgcccgcgcccgcgcctccgccgccgccgccgcagccggcgtcgccgaagacgaagacgaaggcgaaggcgaagaagccgaagaggaagagaagctgcgtgcactgcggctcgacggagacgccgcagtggcgggaggggccgacggggcgcggcacgctgtgcaacgcgtgcggcgtgcggtacaggcaagggaggctgctgccggagtaccgccccaaggggagccccaccttctcgccgtccgtgcacgccgccaaccaccgccaggtgctcgagctccgccgccagcagcggcagagcaccaacccctccactccaccgccgccgccggtgtccgccgccgagccaatccccgacgagcaaaaagaagaggtggtaagcgtgccagtcgccgccgccgcgcccgccaccgacggcggcgcggcgagctcgctggacgcgctgctgctcgacgggccgtcggcgccgctcatcgtggacggcgacgatttcttggttagttag</cdnaseq>

Protein Sequence

<aaseq>MAAVEGGIGEPPGLARERRLRLRRSVAATGDMDGDGDVGGGGGG GGGGGVRYVLALPAMASLAVLIAHLDAAVPVPRRPRSYLPRAVPMAWWAFRLPVFRPP PPPPPPPAKNPVKEEEGVARVVVVVAPPPPVDPGEEEAGKRAAKRARRCLNCDAVETP QWRSGPMGRSTLCNACGVRLRAVGSLPEHRAPAARTTTAAPASPPDSPIWTPGHKPPS SSPDIYLVRRTPKLPVTRPPRTKQAPPTAPAPAPPPPPPQPASPKTKTKAKAKKPKRK RSCVHCGSTETPQWREGPTGRGTLCNACGVRYRQGRLLPEYRPKGSPTFSPSVHAANH RQVLELRRQQRQSTNPSTPPPPPVSAAEPIPDEQKEEVVSVPVAAAAPATDGGAASSL DALLLDGPSAPLIVDGDDFLVS</aaseq>

Gene Sequence

<dnaseqindica>119..148#268..1482#acggaagaaggaaaaaaaaaaaaaagctcccctctttccctctcctgctgacgcgccccgtcgccgccgctcgcttgccgcgcgcggccaaagcaagcaagctcgccgccggccatccatggcggcggtggagggcggaataggagaggtacaagtatccgtcaatctcttggcttcttgtttttcttttctttttcttttatgggtttgatttttgttgcaaaacgagagggagttgtctaaagatagcatttcgttgccgagcagccgcccggattagccagggaaaggcgcctacggctccggcgatctgtggcggcgaccggcgacatggacggcgacggcgacgttggcggcggcggcggcggtggtggtggtggtggtgttaggtacgtcctcgcgctcccggccatggcgtcgctggccgtcctcatcgcccacctcgacgccgccgtgcccgtgccccgtaggcctcgcagctacctcccccgcgccgtgcccatggcgtggtgggccttccggctccccgtcttccgccccccgcctccgcctccgccaccgccggccaagaatccggtcaaggaggaggagggggtggcgcgcgtggtggtggtggtggcgccgccgccgcccgtcgatcccggcgaggaggaggcgggcaagagggcggcgaagagggcgaggaggtgcctgaactgcgacgcggtggagacgccacagtggaggtcgggcccgatggggaggagcacgctctgcaacgcctgcggcgtccgcctcagggcggtcggctcgctgcctgaacaccgcgcgccggcggcgaggacgacgacggccgcccccgcgtcgccgcccgatagcccgatctggacgcccggccacaagccgccctcgtcgtcgcccgacatctacctcgtcaggaggacaccgaagctgccggtgacgcggcctccccgtaccaagcaagctccgcccacagcgcccgcgcccgcgcctccgccgccgccgccgcagccggcgtcgccgaagacgaagacgaaggcgaaggcgaagaagccgaagaggaagagaagctgcgtgcactgcggctcgacggagacgccgcagtggcgggaggggccgacggggcgcggcacgctgtgcaacgcgtgcggcgtgcggtacaggcaagggaggctgctgccggagtaccgccccaaggggagccccaccttctcgccgtccgtgcacgccgccaaccaccgccaggtgctcgagctccgccgccagcagcggcagagcaccaacccctccactccaccgccgccgccggtgtccgccgccgagccaatccccgacgagcaaaaagaagaggtggtaagcgtgccagtcgccgccgccgcgcccgccaccgacggcggcgcggcgagctcgctggacgcgctgctgctcgacgggccgtcggcgccgctcatcgtggacggcgacgatttcttggttagttaggtagccagaaaaaaaaaagaggaataatttcagctgagaatgagatgaggaataccaatttttcgtttgatttttcaggaaaaacagttttaccacctgacattgtgaatactcgtcgatcctggggaaaatctttgcgtgaaatttagctagttttgctgcccagatgaactagttctggtgcttggtagctgatgaagttgaaaccggttttaatggatcaagggggatggatgttcaatgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0168800, RefSeq:Os12g0168800