BGIOSGA036122

From RiceWiki
Revision as of 08:16, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036122| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036122, complete gene.| tag = OsI_384...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036122

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036122, complete gene.

LocusTag

OsI_38474

Ensembl Transcript ID

BGIOSGA036122-TA

Ensembl Protein ID

BGIOSGA036122-PA

Length

5924

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:15801998..15807921

Sequence Coding Region

15807785..15807921,15806946..15807144,15803609..15803926,15803057..15803096,15801998..15802095

Genome Context

<gbrowseImage1> name=IndicaChromosome12:15801998..15807921 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:15801998..15807921 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAGAAAATGCAAAAATATACCAATTCCACGTGAGAGGAACGTGGGGACACACAACGCGGTGCGGACTGCGGAGAGGGGACCAACAGCTGGACCATTCCTGTGGCATGGGAGGGAGCGTGGAACAGCTGTATGGACACATTCGGTGGTTTTATCCAGCTACGAGTTCGACTGCGAGAGAGGAGACGCGGTGGCTCATGGGCTGGTGACCGTGGAGTGCGACCCTGACACCGGAGAGATCAGCCACCGGGAGGCGACGTTCCTCGTCCTGAGTGATGGGCGAGTCCGGGAGGAGGGACGCGGTGAGGATGTTCGAAGCGACCTGCAGGCTCAGGACACATTCGGTGGTTTTATCCAGGGCTACGAGTTCGACTGCGAGAGAGGAGACGCGGTGGCTCATGGGCTGGTGACCGTGGAGTGCGACCCTGACACCATCAGCCACCGGGAGGCGACGTTCCTCGTCCTGAGGAGGGGCGAGTCCGGGAGGAGGGACGCGGTGAGGATGTTCGAAGCGACCTGCAGGCTCAGGGGATCCGTGGCGATCGCCAACGCCTTCCTCGTCGCCAATTGTGATGGCCTCAAGAGATGGGTCATCTGCTACGAGAAGCTGGCTGGCATTCAGCCTCTCGCCGTATTGGAGCAATCAGATCAAGATGATCATTACAACATTGTCAGACATGGGGATAAGAAATGGGCGATGGTCAGATGCACATTTCTGCCACAAAATAGGGCAACTTTTTCCAGGGTTCATGAGTGTGGCCTACGCACTTTCAAAGGCTACAAGGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MGRKCKNIPIPRERNVGTHNAVRTAERGPTAGPFLWHGRERGTAVWTHSVVLSSYEFDCERGDAVAHGLVTVECDPDTGEISHREATFLVLSDGRVREEGRGEDVRSDLQAQDTFGGFIQGYEFDCERGDAVAHGLVTVECDPDTISHREATFLVLRRGESGRRDAVRMFEATCRLRGSVAIANAFLVANCDGLKRWVICYEKLAGIQPLAVLEQSDQDDHYNIVRHGDKKWAMVRCTFLPQNRATFSRVHECGLRTFKGYKE</aaseq>

Gene Sequence

<dnaseqindica>1..137#778..976#3996..4313#4826..4865#5827..5924#ATGGGGAGAAAATGCAAAAATATACCAATTCCACGTGAGAGGAACGTGGGGACACACAACGCGGTGCGGACTGCGGAGAGGGGACCAACAGCTGGACCATTCCTGTGGCATGGGAGGGAGCGTGGAACAGCTGTATGGTCCGACGGCGTGGGCGGGCGGCACCGCCATGGTCCTACGCCACAGAAGCATGGCAACGCGGTGGCGAGCCGAATCGTGCGATACCAAGTTACCAACGCGATCCCGCGAGTTGGGAGCGCGGTATCGATCTGACCAAAGCATCGCATATATATATATATATATATATATATATATATATATATATATAAGTAATTGAAAAAGTTTCATACTCATTTGAATTGGGTATATACTCAATTTCAACAATGGTGCCCGGGCACCATGGAGCACCAAACAAATTTACTATATATATATATATATATATATATAATAATAATTCTCTTTTATCTCCTCCATGATATAGTATATTGCAAAAATATACTCCCTCCGTCCCAAAATAAATGCAGTTTTAGCACTGTTCATGTCCAACGTTTGACCGTTTGTCTTATTTGAAAAAATATTATGATTAGTATTTTTATTGTTATTAGATCATAAAACATGAATAGTACTTTATATGTGGCTAATTTTTTAAATAAGACGGATGGTCAAAGCGCTGAGCACATAGATACTATGGCTGCACTTATTTTGGGACGGAGGTAGTATTAATTAACCTGCGCTGCGATGATTATTTAATTATTAATATTTGTGTGGCATTTTGATCAGGACACATTCGGTGGTTTTATCCAGCTACGAGTTCGACTGCGAGAGAGGAGACGCGGTGGCTCATGGGCTGGTGACCGTGGAGTGCGACCCTGACACCGGAGAGATCAGCCACCGGGAGGCGACGTTCCTCGTCCTGAGTGATGGGCGAGTCCGGGAGGAGGGACGCGGTGAGGATGTTCGAAGCGACCTGCAGGCTCAGGTGATCCGTGGCGATCGCCAACGCCTTCCTCGTCGCCAATTGTGATGGCCTCAAGAGATGGGTCATGTGCTACGAGAAGCTGGCTGGCATACAACCTCTCTGCCGTATTGGAGCAATCAGATCAAGTTAGTATTTACTATTATACTTCTCTCTCTCTCTCTCTCATATTCATCTGGTCATATATATATATATATATAGTGCGTGGCTGAGATTATTCACCGTGAATGATTAATTTTCCAAACACTTAATTTGGTTGAAAATTAAATACTAGCATGGTACGTATGTGTAGATTAATTAATTCTGCCTTGGAATTAATAATTATATAATGTATTTTCATAACCTCGTAAATTTGTTAATTAGATCTTATAAACTTTATTATTTATAACTGCAATATAAGATTGTGGTTAATTTTCTACATTAACCTTGATCGAAGACCATTATAATATATGCCTAGGCTTCATATCTGTTTTGATCAGAGTATTTTAGATACTTGCATACGGTTAGTGCATATATAGATATATACATATGCACATGATATATTGATTGATATATATTGATCGCTTAATTACATATTGATATATATGTATCTTTGCAGGATGATCATTACAACATTGTCAGACATGGGGATAAGAAATGTAAGTCACGGGGGCATGTCAAACCCTGAAAGTTATGCTCTTACCGAAAGTCTAGACATCAAGTTGATTAACATGGGCAAAAATGAAAATTCGAGGACGTATCAGCACGACCTTCCGATTTTGGTACATTTCTGTGCCAGACTCCATACATCGGTGCCTCCCAATGCGTAGTTGACGGGATTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGACGGCACCGGTGGCGGCGGATGCGCGGAAGGCGGCGGCGTTAGTCGAAGGCAACGACGCACCGCCGAAGTGGCGGCTCGGCCCGGCTTGGCGCTAGGAGGGAGAGGAAGGGGAAAAGAGGGGGAGGGGTTCCTCACCGGGGTTCGGCCGGCGTGGGAGGAGGCGACGACGAACGGCGACGGCGAGCGACCGGAGGGCGACGGCGAACGGCGGCCGAGCTCCGGGACACCCTAAGAGAGGAAAAGAGAGAGGTTAGAGAGAGAGAGGGAGTCCACGGCGAGCAAAAACATGGCCGAAGGCAGCGGTAATGGTGGAACCTCACCGGAGCGCGGGCAGAAGCGGGCTCCGGCGGCGGAACTCGACAGAGGGGAGGTGGACGAGGTGGACCTCAGCCGCGCGAACCCGATGGCGGCGGTGGCGTGGTGCGGCGGCGGCCCTAGCGGCGGCTAGAGGCGGCCAGAGTAGTGGAAGAGGCGGCGGCGGGTGGGTGCACGGTGCGGGAGCGGTGGAGAGCTCGGGAGAGGCCGGCGAGTGAGGGAAACGAGAGAGGGGGTTGCGGGGAAGCTTTATAGGGGCTCAGGAGGGGTGGACACGGCCGGGAAACCCCCGATTTGGCTGGCGACGTGGGAAAGTGGGGAGAAAGAGTTGGGGGGGGGGGATTCAAATCGAATCCCGCCCTTGCGGGGGCGCGCGCGTGCGGGAGAGGAGGGGGAAGCGGGTGGTGACGTGGGCGCGGCGACGTGGGCGTGGGGTGGGGCGCGGATGCGGAGTGGAGGAGGTGGGGCGCCGGCGGTTGGAGCTCCAGCTCCAATTGCTAGAGGAGGAAGACAATCGACAGGTGGGCCCCACCTGTCGGCGCCCGAAGGAGAGAGGGAGGGAGGGAGGACTTCGGGGAGGGGAAGAAAAGGAATGGGCAGGCGGCCCATGATGAAAGGAAAGGGAGGAAAAAGAAAGAAAAAGAAGGGAAAAGGAAAAAGGGGATTTTCTTGGGATTAAATATTGCACTTTGATGAATTTTAATTGGTTAAAATTATTCCCGGGGCTCTGAAAATTCCACTAAAAATCCTGTTAATGTATTGTGACATGGGGAACTCAAGAAAAATTCTCCATGCCGATTCCGATTATTATTTGCATTTATTAATTTGAGTAATTAGCTCTAGGTTAAATTGAACAATTTCTTCGGACGATTTATTTTATGAATTTAAAGAAGGGAGGGGAACTTCATGGCGTGACATGAAATCAGGTCTTTTAAGATCGAAGAACTCTACAGTGAATCTATAACTTAGCTTTTGGAAAAGAATTCAAGAATATATATTTTTTTCTAAACAATTTATGTTTATATACATGCATGGGGAGAAAATGCAAAAATATACCAATTCCACGTGAGAGGAACGTGGGGACACACAACGCGGTGCGGACTGCGGAGAGGGGACCAACAGCTGGACCATTCCTGTGGCATGGGAGGGAGCGTGGAACAGCTGTATGGTCCGACGGCGTGGGCGGGCGGCACCGCCATGGTCCTACGCCACAGAAGCGTGGCAACGCGGTGGCGAGCCGAATCGTGCGATACCAAGTTACCAACACGATCCCACGAGTTGGGAGCGCGGTATCGATCTGACCAAAGCATCGCATATATATATATATATAAGTAATTGAAAAAGTTTCATACTCATTTGAATTGGGTATATACTCAATTTCAACAATAGTGCCCGGGCACCATGGAGCACCAAACAAATTTACTATATATATATATGTATATATATAATAATAATTCTCTTTTATCTCCTCCATGATATAGTATATTGCAAAAATATACTCCCTCCGTCCCAAAATAAATGCAGTTTTAGCACTGTTCATGTCCAACGTTTGACCGTTTGTCTTATTTGAAAAAAGATTATGATTAGTATTTTTATTGTTATTAGATCATAAAACATGAATAGTACTTTATATGTGGCTAATTTTTTAAATAAGACGGATGGTCAAAGCGCTGAGCACATAGATACTATGGCTGCACTTATTTTGGGACGGAGGTAGTATTAATTAACCTGCGCTGCGATGATTATTTAATTATTAATATTTTTGTTGCATTTTGATCAGGACACATTCGGTGGTTTTATCCAGGGCTACGAGTTCGACTGCGAGAGAGGAGACGCGGTGGCTCATGGGCTGGTGACCGTGGAGTGCGACCCTGACACCATCAGCCACCGGGAGGCGACGTTCCTCGTCCTGAGGAGGGGCGAGTCCGGGAGGAGGGACGCGGTGAGGATGTTCGAAGCGACCTGCAGGCTCAGGGGATCCGTGGCGATCGCCAACGCCTTCCTCGTCGCCAATTGTGATGGCCTCAAGAGATGGGTCATCTGCTACGAGAAGCTGGCTGGCATTCAGCCTCTCGCCGTATTGGAGCAATCAGATCAAGTTAGTATTTACTATTATACTACTCACACTCTCTCTCTCTCGCTCTCTCTCTCTCTCACATATTCATCTGGTCATATATATATATATATATATATATATATATATATATATATATTGCGTGGCTGAGATTATTCACCGTGAATGATTAATTTTCAAAACACTTAATTTGGTTGAAAATTAAATACTAGCATGGTACGTATGTGTAGATTAATTAATTCTGCCTTGGAATTAATAATTATATAATGTATTTTCATAACCTCGTAAATTTGTTAATTAGATCTTATAAACTTTATTATTTATAACTGCAATATAAGATTGTGGTTAATTTTCTACATTAACCTTGATCGAAGACCATTATAATATATGCCTAGGCTTCATATCTGTTTTGATCAGAGTATTTTAGATACTTGCATACGGTTAGTGCATATATAGATATATACATATGCACATGATATATTGATTGATATATATTGATCGCTTAATTACATATTGATATATATGTATCTTTGCAGGATGATCATTACAACATTGTCAGACATGGGGATAAGAAATGTAAGTCACGGGGGCATGTCAAACCCTGAAAGTTATGCTCTTACCGAAAGTCTAGACATCAAGTTGATTAACATGGGCAAAAATGAAAATTCGAGGACGTATCAGCACGACCTTGCAGATTTTGGTACATTTCTGTGCCAGACTCCATACATCGGTGCCTCCAAATGCACTAGTTGGACGGGATTTCATTTCTTAATAAATTCAAATGCAATGTCACAACGGTACGCAATGCTCTTTGTTTTCCATCTAAAATTTATTACTGAGTTCTCTTGTTTGGCAATTTAAAAATTAGCTAGTTAATAATTATTTCCTTCCATGCAAGATCGATCTAGCTAGTCTAAATGTTTCCTCCCTTACCATCTAATATCCTCCACCATTATGCAAATAAATTCCATGCATCTAATTATTGGCAATAAGAGAATAACCATAAGAATTTTTCTCTAACATATATGATATATGCATTCTTCTATGTTAGACAGTTAGAGTGATTAATTTCGCTTTCGTTCAAGATCTTTTTACCATAAAAAAAATATTTGAATACAGGTACTTATGGGCTGACATAGTTAAGGGGCATCCACTTTTTCTTGATCCGCCATCAAAACTTAGATGTTACGTGAATCTGTTTGAGTGGTCAGAATTGATCCAAACATCAGAGAAAACGGCTTTTTGTGATGCATGTTACAAATTAATGCCTGATCTCACACAAAAAACACTTTGGGGGTTGGATAAGTTGTTGCCCAGCTTCTGTCAAGATTTATTTGAATCAAGCTTATAAAGGAATTAGCATCTATGAAGATATCATCACTTTTGTAAAGAACATGATACTTCATGGAAGACAGGAGCTCATGAATGCAAATGGGGTAATTAACTAACACGCTTAATTTCTCTCTCTTTCTCACACATTATGTATTCATAACTAACTATAATATGTATGCAATTTTTATTCTAACATTTTTTTCAGGGGCGATGGTCAGATGCACATTTCTGCCACAAAATAGGGCAACTTTTTCCAGGGTTCATGAGTGTGGCCTACGCACTTTCAAAGGCTACAAGGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036122