Os12g0169100

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Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0169100| Description = Protein of unknown function DUF869, plant family protein| Version = NM_001072792.1 GI:115487545 GeneID:4351614| Leng...")
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Gene Name

Os12g0169100

Description

Protein of unknown function DUF869, plant family protein

Version

NM_001072792.1 GI:115487545 GeneID:4351614

Length

6838 bp

Definition

Oryza sativa Japonica Group Os12g0169100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3513931..3520768

Sequence Coding Region

3514274..3514618,3514735..3517115,3517654..3517981,3519141..3519257

Expression

GEO Profiles:Os12g0169100

Genome Context

<gbrowseImage1> name=NC_008405:3513931..3520768 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3513931..3520768 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttatggatcgaacgagttggctctggaggcgcaagccgtcagacaagagccccggaggcgccgagaacaccgtgtctgtgtcgtcacattctgagcactactctgatgatcaggaggttctgaggcctgtctcaaacaatgcttcaccacatcttggccaatcacctggaatgccttcaagggttagggatgatgggacccaagagattggagtcacaaaaccctcgaatgagaagttagcattgggatttaaactaaatgattcttctccacggcatggtcaatcatcagagccacagtcatcttcaaatgtcagagatgaagatgtaaaggagaacttgaagagtttgaatgataaacttgctgctgcatttttgacaattaatgctaaagaggaattggtgaggcagcacgctaaagtcacagaagaggctgttttgggttgggaacaagctgaatctgaagttgctgccctaaagaagctacttgaagcttcagcccagaagaatggttccctcgaggttcaagtcagccacttagctgaaaaaaatgcttctctcgaggttcaagtcagccgcttagatgaggctctgaaggaatgtgtcaggcagctgcacctagcacaggaagatcaagcggagaaagtccatgatgtagttaccaagtcccaggagttggagtctgagaactcaaagctccaaaaccgcatcactgaactgaagaagcagctggaaaccacgaaactagaagcctccaacatgtctatagatcatgatctgcaagagaagtttcaggcaattaagaaagagaacatggatctcaagtccaagcttcttgtacagtccaaggacctgaagatactatcattggaaagagacttgagcaatcaagcagcggaaacagcaagcaagcaacatttggaaaacgtgaaaaaaattgcaaggcttgaggcagaatgccgcagattacatcatctaactcgcaaagcaacattaattaatgattctaggcctctggcaaacaatacttgtgtggagtcacttactgatagccaatctgacagtgctgaacgcatggctgctgttgataatgaactgcggaattccgactcatgggcatctgctctggtagctgagtttgatcagttcaagaatggaaatgctgatgagaaaaatcttgtgaacaatcctgttgtgattgatctaatggatgatttccttgagatggagaggttagctgcattgcctgaatcagatcgcacaagctctaccttcgatatggaaacagattctgataaagctgtgaccagaaacagctcctctaaacttgaaactgaagagttgaggaatcaggtggctgatttgcatgcacaggttgagaagattgaaagtgagaaaaaggagcttgagatggcactaatggaggcaagaaatcaacttgacatctcctgcaatgcactagtggcagcaaagaacaggctagttgaaatgcaaatggagttggacttggcaaatgactccaagcatgatgctttgagggattttgagggattgaactcagagaagaaggctttggagtttcaactggagtctaaatctgtacgagtggaggagttacttcaggtggtggcttcattggaagaaaacacagataaaaaggaattggagtcacaattagaactgctgtctgcggaagccaaagagcttcgtctgactgtaacatcattattagagaagattgaagctgaaaggtctctttctgtgcagcatcaagcagaagcagtggctgcatgtaatgcgaaagaatcgttggaggaacagctatattcagcaaacactgaagtagagagattgcatgtcattgtcaaagaactggaggatgaggtagaaaaagagaagatgaggcaggaagaactcgtggcagaattagaaatgaagatggaaacagctgtcgaggctattaaagaatcattggaggcacaactatgtgcagcaaacactgaagtagagagactgaatagcatagttcaggcactagagaacgatatagaaaaagagaaggcgctgcataaagaactgacagcacagttagaggtgaagtttgaagaagagaaagctcgttctgttcagactgttaaggaatcaatggaggcacagctatgctcatcaaacaccgaagtactaaaactgcgtgacattgttaaagcactagaaaatgaggtagaaaaggagaaggcactgcatgaagatctttcagcacagttggaggcgaagatcgaagcagagagaactttttctgtggaggctattaaagaatcatttcagtcagaactccagtcagtgaactcagaagttgtggagctgcgcggtatggtgactgcacttgagcatgaggtggtaaaggagaaaacattttctgcagagctccaaatgcagctagaagctctggaggcaataaaaagggtgttggagtctgagattgagtctgcacatcaggataacagaaagctcaatgataaggtgaagtcttttgaagcaaaactgaaaaaacaggtgtcttcagcggtggacttcacagccaaggaagaagccatgcagtcagagagaagggccatgaagcaacaacttgaagcagcaaagatggaagttggaaagctgacaaacaaggtgagcttgctccaaggggaggtgttacaggagagattgttatcagaagagttcgaacaagaataccacaagctggaggctcggctgtcaagggatagccgggacgcgaagctctggcgactcgcaaattcaaatgggggtctgaaggccaagcaggagaaggaacttgcaaatgctgctgggaagctcgcagaatgccagaagaccatagcttctctcggccgtcagttgaaatcattgaccgacatcgacaatacgattgtggagcctgagagactggaacccagagaaatcagagaaatgccgctcgattttagaaatagtgatgctgactttgcagtatttgcagatgagttatatgattttgatcttccaaaggtcaacagcagctgcttttcgccgttaccgtcgatccagccctcttcgccaccttcagaaatgtcagtatttgcagggggcctgtcttcacttagtagtttcagaagcaaaagaagaaagtaa</cdnaseq>

Protein Sequence

<aaseq>MVMDRTSWLWRRKPSDKSPGGAENTVSVSSHSEHYSDDQEVLRP VSNNASPHLGQSPGMPSRVRDDGTQEIGVTKPSNEKLALGFKLNDSSPRHGQSSEPQS SSNVRDEDVKENLKSLNDKLAAAFLTINAKEELVRQHAKVTEEAVLGWEQAESEVAAL KKLLEASAQKNGSLEVQVSHLAEKNASLEVQVSRLDEALKECVRQLHLAQEDQAEKVH DVVTKSQELESENSKLQNRITELKKQLETTKLEASNMSIDHDLQEKFQAIKKENMDLK SKLLVQSKDLKILSLERDLSNQAAETASKQHLENVKKIARLEAECRRLHHLTRKATLI NDSRPLANNTCVESLTDSQSDSAERMAAVDNELRNSDSWASALVAEFDQFKNGNADEK NLVNNPVVIDLMDDFLEMERLAALPESDRTSSTFDMETDSDKAVTRNSSSKLETEELR NQVADLHAQVEKIESEKKELEMALMEARNQLDISCNALVAAKNRLVEMQMELDLANDS KHDALRDFEGLNSEKKALEFQLESKSVRVEELLQVVASLEENTDKKELESQLELLSAE AKELRLTVTSLLEKIEAERSLSVQHQAEAVAACNAKESLEEQLYSANTEVERLHVIVK ELEDEVEKEKMRQEELVAELEMKMETAVEAIKESLEAQLCAANTEVERLNSIVQALEN DIEKEKALHKELTAQLEVKFEEEKARSVQTVKESMEAQLCSSNTEVLKLRDIVKALEN EVEKEKALHEDLSAQLEAKIEAERTFSVEAIKESFQSELQSVNSEVVELRGMVTALEH EVVKEKTFSAELQMQLEALEAIKRVLESEIESAHQDNRKLNDKVKSFEAKLKKQVSSA VDFTAKEEAMQSERRAMKQQLEAAKMEVGKLTNKVSLLQGEVLQERLLSEEFEQEYHK LEARLSRDSRDAKLWRLANSNGGLKAKQEKELANAAGKLAECQKTIASLGRQLKSLTD IDNTIVEPERLEPREIREMPLDFRNSDADFAVFADELYDFDLPKVNSSCFSPLPSIQP SSPPSEMSVFAGGLSSLSSFRSKRRK</aaseq>

Gene Sequence

<dnaseqindica>6151..6495#3654..6034#2788..3115#1512..1628#agtagtagtagtatccgagaaagctgcgagcttttcttccccgattcgagctgcacgcgcgggaaggaggaaggtaatgcgggtcgccaatggcggatgatgcaggtgagctcttcttcttcttcttcgacctcgtcgatggcggtgttcgtcgtgaaatctctctgtttttttttcttcttctttctttcttttcttttctttttgagctttggatgctgtgttgcatttatcactttccccgatgcatttattctgctcgggggagagggagagttgagtgcagaagcgagaggagggagatagctgtactggcctcacatggtgaaagctgcaggtggtggtggcggccatggcctggaccccgcgcctttctttcccctccgcttttgagctcgcctcctgctccgatctgcccgcgtgagctgtgaccccgcgcttttccccccctctcccccccagctcagctcaagaggatagagatagagagagagagagagagagagagagagagagagagagagagttattgggaagcaagaagaaatgtggtgttgagattgagagagtgtgtgtgttcttcacggagttcttgcgatgcgatgcgaggcattcccgtcttctccgtgtagtcgttgaattcgaggaggtattaatgcccgccatccctcctcgcttcctgctctacctctgcttgttttttgctccctctcgcttcgttcttggattccctcatggaatttcttcttcgcttcctctgaatatttttttgttctttctgtttttgttactctttcttccgccggatttagtgggaatacctcttgatttgggggcttcgagaggaatttcggcgtcaagctgcaatctttttcggggattttcaccctggtttcttgggttctcttggggaattgcgagtagtcggtggctactgttattttgcactctgacattctctctgtgaaaaaacacttactttttttttactgttttatttgctgctactgcaaaagcatgctagtaaaacaacagggtttgattgggtatcaatggtgataaattccatcttacctccactgtttttttggtacaatgatgcattgttcttctcttgcaatgttttgatctctttgttttctcggcactgtttgtttctgattggatttagtgtcagtaagaatgctagtctgatttaacttttgccaagttgtgctgaaaaaagaaataagtgacagtcttgcagcatgtgctgtgggctactagtcaatgcaaaaaggttgtgtgcttgtgaattgtcacggcattcttctttctttatagtaggtagtgtgttgaggatgttgcgtctttcacaatcaaatgttatcattctcggtgctaattttctactgcatgttgtttgatccagaccagcaacctgcaactgggcgagctgctgatcaatgaaaagcagcatacggtggtaattaagaaatcaggggtttcagctctgatctgttgaacagttgatggttatggatcgaacgagttggctctggaggcgcaagccgtcagacaagagccccggaggcgccgagaacaccgtgtctgtgtcgtcacattctgagcactactctgatgatcaggttctatcccatgtctgatgactttgttttgtataactagagttctttctacctcaataggacagtttagttgctatgttcttttcggacctacgtcgcggttgttacattctttagtcgtagccattctctttctagctgttataaacaaatctcctttttagcttttaagaaaatgagaggcaggataaattacttgctttttttatctgaatgagaatggaatttgaatccaggactccaacaatgtgataactgtactatcgacctattgttttcagagatagcgaagtttgtcttagaaaagaagtctgaaactttacattataagtgttacagaaatgtcactttaggattgtacaggcaagatgtcattttcacttccttgggcagatatatatcgcagacaaacttatagtttggcctgattctaatggagcatagtggttcagatgataatgtctgatgaatgcattgatattgacttgatgtattatggtactagagattgagcagcatgttgctacctagtacctaccgagtacagactatcgtgctcataacagtagctcaaaccgtataaaatctgtcatgttgaggttgagtatgaagctgaatctcgacttctattaatgaaaatgttgtagcgatgtgccgatgtttcataatatttgtaatgcccttttccgtgcaagcaaagaaaaagctttgaacagacaaaatgatgctggtagtatttaagggagttaagtaccctgttcagttaactccaagagagttcttctaattatgagaaaattcattccttaaaatttattctgaatagtatctgccaactaaagacaattaaattcaattcgcccaatctcctgtaagatgctcttgaaatctatgcatatttttcaaggttctaactattaagttctgcaacagtctatattgatgtacctttttgtcaacctgtttgtgttttcttgtatgaaggtaaatgagctgcctaatagcactaaatatggacataaatagttaatacttgtaatataatttatacatatatggcatcttttgctaaatctggatgctgttttatttctttttctgaatgataataaatgatttatcctgagtgttcgaattttgtttgctcatgttaaaccaggaggttctgaggcctgtctcaaacaatgcttcaccacatcttggccaatcacctggaatgccttcaagggttagggatgatgggacccaagagattggagtcacaaaaccctcgaatgagaagttagcattgggatttaaactaaatgattcttctccacggcatggtcaatcatcagagccacagtcatcttcaaatgtcagagatgaagatgtaaaggagaacttgaagagtttgaatgataaacttgctgctgcatttttgacaattaatgctaaagaggaattggtgaggcagcacgctaaagtcacagaagaggctgttttgggtaaatatatcctttctataacatcttttttttttttggagaaagggaggtaggccttccccacttctattaccagaaatggctgaaatgacatgtagttcttacagcaaacaaaataaaacatagataggagcttcagcatgccttttagcctgatgccgtcctgttgggtgcacaccgatggctggatagtctgctgctttgagatctgataatgactagaaagaaaagataaagctataatagtttctagaaaagcaacttgaaagcatcacttcctgtgtggctgtgctacacaaaatcctttctataatttacgcatattaactaaatgattcctccatgttagttattttgtaggtaaactttagaaactgtgcacttaattgatccacacttccattcattaatctgcaaagttacttctgagtactgaattgcgtttgtaaaaattgttgtaagagatcaaattgatttaggtaattttatttgtctttgttgcatattactaatcttgtcattgatatacattttttaggttgggaacaagctgaatctgaagttgctgccctaaagaagctacttgaagcttcagcccagaagaatggttccctcgaggttcaagtcagccacttagctgaaaaaaatgcttctctcgaggttcaagtcagccgcttagatgaggctctgaaggaatgtgtcaggcagctgcacctagcacaggaagatcaagcggagaaagtccatgatgtagttaccaagtcccaggagttggagtctgagaactcaaagctccaaaaccgcatcactgaactgaagaagcagctggaaaccacgaaactagaagcctccaacatgtctatagatcatgatctgcaagagaagtttcaggcaattaagaaagagaacatggatctcaagtccaagcttcttgtacagtccaaggacctgaagatactatcattggaaagagacttgagcaatcaagcagcggaaacagcaagcaagcaacatttggaaaacgtgaaaaaaattgcaaggcttgaggcagaatgccgcagattacatcatctaactcgcaaagcaacattaattaatgattctaggcctctggcaaacaatacttgtgtggagtcacttactgatagccaatctgacagtgctgaacgcatggctgctgttgataatgaactgcggaattccgactcatgggcatctgctctggtagctgagtttgatcagttcaagaatggaaatgctgatgagaaaaatcttgtgaacaatcctgttgtgattgatctaatggatgatttccttgagatggagaggttagctgcattgcctgaatcagatcgcacaagctctaccttcgatatggaaacagattctgataaagctgtgaccagaaacagctcctctaaacttgaaactgaagagttgaggaatcaggtggctgatttgcatgcacaggttgagaagattgaaagtgagaaaaaggagcttgagatggcactaatggaggcaagaaatcaacttgacatctcctgcaatgcactagtggcagcaaagaacaggctagttgaaatgcaaatggagttggacttggcaaatgactccaagcatgatgctttgagggattttgagggattgaactcagagaagaaggctttggagtttcaactggagtctaaatctgtacgagtggaggagttacttcaggtggtggcttcattggaagaaaacacagataaaaaggaattggagtcacaattagaactgctgtctgcggaagccaaagagcttcgtctgactgtaacatcattattagagaagattgaagctgaaaggtctctttctgtgcagcatcaagcagaagcagtggctgcatgtaatgcgaaagaatcgttggaggaacagctatattcagcaaacactgaagtagagagattgcatgtcattgtcaaagaactggaggatgaggtagaaaaagagaagatgaggcaggaagaactcgtggcagaattagaaatgaagatggaaacagctgtcgaggctattaaagaatcattggaggcacaactatgtgcagcaaacactgaagtagagagactgaatagcatagttcaggcactagagaacgatatagaaaaagagaaggcgctgcataaagaactgacagcacagttagaggtgaagtttgaagaagagaaagctcgttctgttcagactgttaaggaatcaatggaggcacagctatgctcatcaaacaccgaagtactaaaactgcgtgacattgttaaagcactagaaaatgaggtagaaaaggagaaggcactgcatgaagatctttcagcacagttggaggcgaagatcgaagcagagagaactttttctgtggaggctattaaagaatcatttcagtcagaactccagtcagtgaactcagaagttgtggagctgcgcggtatggtgactgcacttgagcatgaggtggtaaaggagaaaacattttctgcagagctccaaatgcagctagaagctctggaggcaataaaaagggtgttggagtctgagattgagtctgcacatcaggataacagaaagctcaatgataaggtgaagtcttttgaagcaaaactgaaaaaacaggtgtcttcagcggtggacttcacagccaaggaagaagccatgcagtcagagagaagggccatgaagcaacaacttgaagcagcaaagatggaagttggaaagctgacaaacaaggtgagcttgctccaaggggaggtgttacaggagagattgttatcagaagagttcgaacaagaataccacaagctggaggctcggctgtcaagggatagccgggacgcgaagctctggcgactcgcaaattcaaatgggggtctgaaggccaagcaggtatatatatactgaagtcttgtaatttacatcacaccatttacccttggcttaacacactcgcctggtatttatcaagaaatggatccaactataaatcgttgtgtttgtcacaggagaaggaacttgcaaatgctgctgggaagctcgcagaatgccagaagaccatagcttctctcggccgtcagttgaaatcattgaccgacatcgacaatacgattgtggagcctgagagactggaacccagagaaatcagagaaatgccgctcgattttagaaatagtgatgctgactttgcagtatttgcagatgagttatatgattttgatcttccaaaggtcaacagcagctgcttttcgccgttaccgtcgatccagccctcttcgccaccttcagaaatgtcagtatttgcagggggcctgtcttcacttagtagtttcagaagcaaaagaagaaagtaaagagctggtgaaaacaaactgtccagatgctactaacagttcatggatgctctcatctgtaggtagatcagtgtacatttacagaaactgattgtagattctgtgtgctgaattccgttccagcaagctcagtttttttttcacagccttcttgatgagatttttactgtatcagtgttggctgttttggtgccagaaaaaatgggaagaaaaatgtaaactcagtatcagtgtgagactgcagaagtgcagatacattgtggtgtatttgtgttgtgcggcttatacttgctgtgtgaattgtgatctccatattaccaatcatacttattctgcctgattg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0169100, RefSeq:Os12g0169100