Os12g0170200

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Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0170200| Description = Bile acid:sodium symporter family protein| Version = NM_001189880.1 GI:297728890 GeneID:9271666| Length = 3593 bp| ...")
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Gene Name

Os12g0170200

Description

Bile acid:sodium symporter family protein

Version

NM_001189880.1 GI:297728890 GeneID:9271666

Length

3593 bp

Definition

Oryza sativa Japonica Group Os12g0170200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3572531..3576123

Sequence Coding Region

3572750..3572923,3573375..3573435,3573651..3573788,3573887..3574008,3574083..3574238
,3575342..3575482,3575648..3575716

Expression

GEO Profiles:Os12g0170200

Genome Context

<gbrowseImage1> name=NC_008405:3572531..3576123 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3572531..3576123 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcgccatgggcctcaccctcgagctccgggagttcttggctctcctccgcgagaggcccctctccatattgtttggttgtgctgcacagtacaccataatgcctgcctttggagcaattgttagccgggtgctggggctctctccaccaatatcagtgggactaattctgctaggatgctgtcctggaggaactgcttccaatgtggtgactttagttgctaaaggtgatgttccactatcaatcgtcatgactgtgtgcagcactcttggtgcagtgttccttactccactgttaacaaaaattcttgctggtgcttatgttccagtggacgcggtgaagctttccttaagtactctgcaggtggttgttgctccaattctattaggttcctctatacaaagtgcattcccatcagtagttaaatttgttactccttttgcccctcttctagcggtcttaacttcatcacttctggcgtgcagcgtgttctctgagaactttgtacggctgagatcaacaattgctgatgcatcatatgggaatggaggcctgttttctggggatattggggttgtgatgctgtctgtcttcttgctgcactgtgctggttttgttgtcgggtacacgacagcagctataggtggtttcaaggaaagacaaaggagagcgatatccattgaggtagggatgcagaattcatccttaggagtagtattagcaactgcacatttctcctcttccttggtcgccttgccagctgcactctccgctgtcatcatgaacataatgggtagcacattaggtcttgtatggcaatttatgacaccgcctgattcgaagaacgaaaaccgttga</cdnaseq>

Protein Sequence

<aaseq>MLAMGLTLELREFLALLRERPLSILFGCAAQYTIMPAFGAIVSR VLGLSPPISVGLILLGCCPGGTASNVVTLVAKGDVPLSIVMTVCSTLGAVFLTPLLTK ILAGAYVPVDAVKLSLSTLQVVVAPILLGSSIQSAFPSVVKFVTPFAPLLAVLTSSLL ACSVFSENFVRLRSTIADASYGNGGLFSGDIGVVMLSVFLLHCAGFVVGYTTAAIGGF KERQRRAISIEVGMQNSSLGVVLATAHFSSSLVALPAALSAVIMNIMGSTLGLVWQFM TPPDSKNENR</aaseq>

Gene Sequence

<dnaseqindica>3201..3374#2689..2749#2336..2473#2116..2237#1886..2041#642..782#408..476#ctcgccgcgcgccacgcgcgggaaccggacgaacacccacctcccaccgcccaccgcccaccgccgcgccggccatggctcccctcctcctcctcctccccccactccgcctcctccccgccaccctcctccgcgccacaagccgcccggcgtcgccaaggcgcggcctctcctactcctaccccaggcgcgtcgccgccgtcctgcgacaatgccgcgccgcggcgccgcctccgcctgctcctccggatgccgtgccccggtggcacgcggcgctcgcggctgcggcggggctgtacccggcgtacgtgacggccggcgccgcggtggccgtggcgcggcccgatgcgttccggtggttcgtcgcgctggcgccggggtcgtacacgttcgccctgggactcatcatgctcgccatgggcctcaccctcgagctccgggagttcttggctctcctccgcgagaggcccctctccgtaagcaccccaccccaccctgcaaattttggcactaaatatttctccatttctaggtgtacaattccatggcaatctttcaaatttcaattgtgtccttgaatccaagatcccaaaattgtgactgatccaaaggaaataaattgtgtgttttggccgctgtagatattgtttggttgtgctgcacagtacaccataatgcctgcctttggagcaattgttagccgggtgctggggctctctccaccaatatcagtgggactaattctgctaggatgctgtcctggaggaactgcttccaatgtggtaagattctcaaacttgctcagagaatatgccccatttgagatggatcctcgactggattattgccgcgaactgtctactttattgtggagataaattaaacattttgagaaataaacttaacaaaataatttagaacaagtggtctaagcaatgtagtagaatttgtttttaaagaaaatgtatttttagaggcgtgaagccaggggcggacccagcccagaggcaaggcccggaccggcctatagtatttgttttcataatattagcccatgggatattgggctttcaaccccaggccccgtgccatggcctagggtgcccggggtcggggtccgcccctgcatatagcaaataatacatggctcgactatgagtctatgacccgttttgtactgaaggggaattaaggatcaacacttcaacagacacatagtagtgtaaatcaagaattcaaatgtgcatattatttgaatgttcgagtgttctagcaatttcacagtgccacagtccaatgttgaattttaaatttccaactaggattaagatcaagtgtgctttatgaaggtatatcgactatttaaacgattgattccaacagttaacatatgttttctgagtgccaagaaacacacaattatctagagcaccaagttatttttggtggttcctttaggttatttctacataagacgttctgttattttactttatcttcttggctttatgaaccctgagctctccaagtatatgctgtgtgagtcaaatatgcatgattaaacaaagggtctctcattcaagataaaatcatgatggttggaggcagagtatcccacataggttgtccatgtatgtggatgatgtagttatgttcttcctagcaatattcggggaagcgtcgggtctaaataccaagttcgcaaaattctcggtgtttctgagctgcctagtgtggaattgcccctgtgctgttcatgattcccatgtaccttgggttgcctctgtatgaaaaggcacacaaatattttgcatgctgaaaaaatcatttgtacctggattttctttgttatgtattgacctagttcttccatatagtggttcaggtgactttagttgctaaaggtgatgttccactatcaatcgtcatgactgtgtgcagcactcttggtgcagtgttccttactccactgttaacaaaaattcttgctggtgcttatgttccagtggacgcggtgaagctttccttaagtactctgcaggtgaaatttatgataccactgttcattgtagaatttgaattagcttttatctgacattctcttttctggtttaggtggttgttgctccaattctattaggttcctctatacaaagtgcattcccatcagtagttaaatttgttactccttttgcccctcttctagcggtcttaacttcatcacttctggcgtgcaggtttgagttcttgtaacatgttatgttattggattttgaatagctgaaacagcacgcatttttagttttttttaccatttttttattcttatggacagcgtgttctctgagaactttgtacggctgagatcaacaattgctgatgcatcatatgggaatggaggcctgttttctggggatattggggttgtgatgctgtctgtcttcttgctgcactgtgctggttttgttgtcgggtgagcactggactgtttgctatagttatttttttatatgaaggaattacattggttgtgtgaatagtagaaatttttgtttaagaaaaactgtaagggaacaaatcgtgatgtttcatccttccattaattcaaccaaaatgttatggatgcttgtagtagttagtatctatcatccagatttctgattgtttacataattttaccacgcataggtacacgacagcagctataggtggtttcaaggaaagacaaaggagagcgatatccattgaggtatgcagtctgatcgctaaagctactactagtaatttatcatcgtcagaaatgcagaacatagcattccaaagctaccaattttctatcatcattaaacgtggagtcttattaaaatatatgaaatcacacttccatttagaaaatcagatggtttaaattgcttcggagagatcaacactaaacgtaacaatatctagccattatcaacactgagttactaaccataaaaatatctaaccatttgttataatttaaacagttgcattccccacagtgtaagtttatttctcatactacctttaaatatgtagcattacaaaacaatactattactatggccttgatcatatttatttggtctttgttcagtttataactggcatgaatataatttgtttctggatagttttctccaggatgatgaatattatgcctttttggattgcaggtagggatgcagaattcatccttaggagtagtattagcaactgcacatttctcctcttccttggtcgccttgccagctgcactctccgctgtcatcatgaacataatgggtagcacattaggtcttgtatggcaatttatgacaccgcctgattcgaagaacgaaaaccgttgactcgcgtgatgtatgacctgctcctactttgtgtggttaatctcctgtcatagtctgctgtaagaaacattagaaacgttaaaaccatgccgtgtatatcctcaactttcagcccttcctgatgtcaacttgtcaagtagggattgtacatagttttggaatgttgattttctgaacttttgctgatatacagtctaaaatgcacatgtggccaaatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0170200, RefSeq:Os12g0170200