Os12g0170500

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Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0170500| Description = Conserved hypothetical protein| Version = NM_001072802.1 GI:115487565 GeneID:4351625| Length = 1596 bp| Definition ...")
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Gene Name

Os12g0170500

Description

Conserved hypothetical protein

Version

NM_001072802.1 GI:115487565 GeneID:4351625

Length

1596 bp

Definition

Oryza sativa Japonica Group Os12g0170500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3580103..3581698

Sequence Coding Region

3580295..3581695

Expression

GEO Profiles:Os12g0170500

Genome Context

<gbrowseImage1> name=NC_008405:3580103..3581698 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3580103..3581698 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcacccgcgaattgctcggatggcagcagcatcgcgagcgaagcatccaactgcccgaatccgaaatccatggcgccgaagcttcccgcggagaagaactcatccccaccaccggagccggacccgacgccggcgatccctttgacgtcaagaaactcattgccgccgccgccgccccacgtgaactccggctcctcctgcttgtggcggcggcgacccgacgtcggcggcggcgggggaggggggagagcgggggcgtggccctggaagagggcgacgtgggcgaagagcttgtccttgcgggagaagctggtgccgcaggagcagagccagcggtcgcggccgcagtgcttctcgtgggtcttgaggtcggccatgacggagaagcgcttggcgccgcagcggccgcagacatggcgcttctcgcagtggctccgcttgtagtggttcttcacgcacaggatcgtcttcagcggctggaagctcgcgtgcatccggttccgcttgcacccggcgtgcgggcacgagtacctcctctccggctgcggcggctgctcctccccctccggcggcggcggcggcttcgccagcgccgccgcgctcttgtactcgtcgccgtgcccgcgcatgtgcatccgcaggttcgcgtcgcgcttgaaccccttgccgcagatgccgcagaagtgcgtgtgcggcgccaggatctcgtcctcctccagctgcagcacctcgtacttctcctcctccgccgccgccgccggattctccctcgcatcctgctcgtcgccggcagcgccgacgcattcgtccatggcgccgccgttagtccataccttgaagagctcgtcgtagtcggggctacccatctgctcctcctcatcttccctgttcgtctcgttattacgagccgagctggagctctcgccggcggcgaggctgaccgcttgtgcggctccggccgcggcggcgggcggcggggtggtgcggctgaggaacgaggagttcttgagcgacgggaggaggctgccggcggtggagatgagctggacgatgaggcatgtcaggtcggcgttgacaagctgctgctccggcgtcgccgccgacgacgacgaggcgcggcggccggccatggatcggatgacgtccttgacctgccggatcttctcctcgatgaaggtgaggttgtccagcatcgtgtccgggctccagtccatgtgctggatgctaaccgacggcagcagctgctgcggcggcggcggcgccatgccgaggagagcgtcatccgccatgaacgggtagaagagaggattcatggaggtcaggttcgcagcctgatcgcgcatcgtgttcgtcatctggtcgcgatccattgcaagcttctgaataatctcgcgtga</cdnaseq>

Protein Sequence

<aaseq>MITRELLGWQQHRERSIQLPESEIHGAEASRGEELIPTTGAGPD AGDPFDVKKLIAAAAAPRELRLLLLVAAATRRRRRRGRGESGGVALEEGDVGEELVLA GEAGAAGAEPAVAAAVLLVGLEVGHDGEALGAAAAADMALLAVAPLVVVLHAQDRLQR LEARVHPVPLAPGVRARVPPLRLRRLLLPLRRRRRLRQRRRALVLVAVPAHVHPQVRV ALEPLAADAAEVRVRRQDLVLLQLQHLVLLLLRRRRRILPRILLVAGSADAFVHGAAV SPYLEELVVVGATHLLLLIFPVRLVITSRAGALAGGEADRLCGSGRGGGRRGGAAEER GVLERREEAAGGGDELDDEACQVGVDKLLLRRRRRRRRGAAAGHGSDDVLDLPDLLLD EGEVVQHRVRAPVHVLDANRRQQLLRRRRRHAEESVIRHERVEERIHGGQVRSLIAHR VRHLVAIHCKLLNNLA</aaseq>

Gene Sequence

<dnaseqindica>4..1404#ctgatgatcacccgcgaattgctcggatggcagcagcatcgcgagcgaagcatccaactgcccgaatccgaaatccatggcgccgaagcttcccgcggagaagaactcatccccaccaccggagccggacccgacgccggcgatccctttgacgtcaagaaactcattgccgccgccgccgccccacgtgaactccggctcctcctgcttgtggcggcggcgacccgacgtcggcggcggcgggggaggggggagagcgggggcgtggccctggaagagggcgacgtgggcgaagagcttgtccttgcgggagaagctggtgccgcaggagcagagccagcggtcgcggccgcagtgcttctcgtgggtcttgaggtcggccatgacggagaagcgcttggcgccgcagcggccgcagacatggcgcttctcgcagtggctccgcttgtagtggttcttcacgcacaggatcgtcttcagcggctggaagctcgcgtgcatccggttccgcttgcacccggcgtgcgggcacgagtacctcctctccggctgcggcggctgctcctccccctccggcggcggcggcggcttcgccagcgccgccgcgctcttgtactcgtcgccgtgcccgcgcatgtgcatccgcaggttcgcgtcgcgcttgaaccccttgccgcagatgccgcagaagtgcgtgtgcggcgccaggatctcgtcctcctccagctgcagcacctcgtacttctcctcctccgccgccgccgccggattctccctcgcatcctgctcgtcgccggcagcgccgacgcattcgtccatggcgccgccgttagtccataccttgaagagctcgtcgtagtcggggctacccatctgctcctcctcatcttccctgttcgtctcgttattacgagccgagctggagctctcgccggcggcgaggctgaccgcttgtgcggctccggccgcggcggcgggcggcggggtggtgcggctgaggaacgaggagttcttgagcgacgggaggaggctgccggcggtggagatgagctggacgatgaggcatgtcaggtcggcgttgacaagctgctgctccggcgtcgccgccgacgacgacgaggcgcggcggccggccatggatcggatgacgtccttgacctgccggatcttctcctcgatgaaggtgaggttgtccagcatcgtgtccgggctccagtccatgtgctggatgctaaccgacggcagcagctgctgcggcggcggcggcgccatgccgaggagagcgtcatccgccatgaacgggtagaagagaggattcatggaggtcaggttcgcagcctgatcgcgcatcgtgttcgtcatctggtcgcgatccattgcaagcttctgaataatctcgcgtgatctttattaggaaaagagatggcgcctctgaaatctgcagaggaagaggaatcaagatcgttagccagttcaaagattgttcttgttttttttcccccaagaaactatttgatgttatttttgagttggttgaaaagtcaagaaactgggaactaattagtagtagtaatctactagattatcaagtgatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0170500, RefSeq:Os12g0170500