BGIOSGA036244

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Revision as of 08:18, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036244| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036244, complete gene.| tag = OsI_382...")
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Gene Name

BGIOSGA036244

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036244, complete gene.

LocusTag

OsI_38227

Ensembl Transcript ID

BGIOSGA036244-TA

Ensembl Protein ID

BGIOSGA036244-PA

Length

7577

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:12451056..12458632

Sequence Coding Region

12458471..12458632,12456575..12456700,12455841..12456272,12454853..12455091,12453195..12453322
,12453091..12453128,12452838..12452930,12452280..12452381,12452097..12452199
,12451567..12451662,12451345..12451472,12451056..12451157

Genome Context

<gbrowseImage1> name=IndicaChromosome12:12451056..12458632 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:12451056..12458632 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGCAGTCTCACGCCGGCGACGGCGGCGGCGGCGGCGCGGGCTCCGGGGAGCCGACGAACTGGAGGAAGGAGGCGGACGATAGGCTGCGGCGGCTCCACTCCCTCCAGTTCGGCGCGGACGTCGCGCTGGAGGGCAAGGACCCCGCGGGGGCGCAGCTTGCAGAAAAGGATGTTGGTTGTGTTTTTGCAAAGACAGGAGAAGTTAATATTGAAAAGATCAAGTGTTCAAAGTATTTTCAAGCACTTCTTCAGAAATCCAAAGGACATGCTGCTGAACAAATGAAGACCACTGATTGCCAAGAGTCCAACATTGAAGAAGGTCCGCATGTAGAGGAAAACTCAACTGATATGGAAAATGAGAAGCTTAGCATCAGGGCTTCAAAATTAGTAATGCAAAGAAAACTAACATCACTGCGTAGCCATAAGCCCCTGAAGGCAAATGTTGTACAAGATGGGAATATGTTCAAATCAGTGAGTAACATATCTAATGAGAGTGTTGCTGTCGAAAATGGAGTCAGAACAAATCATACTGATAACAAGTATACTGCTTATATGGATCTTGAAGATGATGACAGACCCCGTGGACTGTTGCAGAATGCAAAGCGAAAGCATGCAGGATTCAGAAGCCCAATCTGCGAACATGCAAATTCTCCATTAAGTAATGATGAAGCCGATGCCCCTGCCAATGAGTTTGTGACTGCCAGGACAAAGTTGGAGATGGATTCTGTGCAAAAGTATGGGCATAATGGTACTCAAGGTGCTTCTGTATCCCCACAATGTGATAACAACCCAAATAACCGGAATTATGGTGTGAGGCCAACCTGGAATTCTCGTCGTGGATTACGTGGTAATTTTGTTCCTCCTATCAGAAATAATGGAGGATCCACTTCCAATATGACCTCACGGGTCATTGGAAAAAATGATGATTCAATGGGAGATTCAACAAGAAAATGTTTAGAAATGCTTTGTGGACCTGATGGTGAGCTTCCTGAGAAGCTGAGAAATCTGGAACCTCGCCTAATTGAGCATGTCAGTAATGAAATAATGGATAAAGATCCTAATGTCCGCTGGGATGACATAGCTGGTTTGGAACATGCAAAGAAGTGCGTGACGGAAATGGGAACAGGCAAAACCATGATTGGAAAAGCAATAGCTGGTGAAGCCAAGGCAACATTTTTCTACATTTCTGCAAGTTCACTGACAAGCAAATGGATTGGCGAGGGTGAAAAGCTAGTTCGAGCACTATTTGGGGTGGCCTGTTGTCGTCAGCCAGCTGTCATATTTGTGGATGAGATTGATTCACTACTATCACAGCGCAAATCAGATGGTGAACATGAGTCAAGTAGGAGGTTGAAAACACAGTTTCTAATCGAGATGGAAGGTTTTGACAGTGGAAATGATCAAATTTTACTTATAGAGGCACGGGCCTGGATAATTCGCAATCTATTGGAGAAGGATGGCCTTTTCAAGCTCACAGAGGAAGAAACAAATATTGTTTGCAAGTTAACAGAAGGTTACTCAGGATCTGACATGAAAAATCTTGTGAAAGATGCCTCAATGGGACCACTAAGGGAAGCTCTTCAACAGGGTGTTGGCATAACAAAGCTAAACAAGGAGGACATGCGGCCGGTGATGCTCAAGGATTTTGAGACTGCTTTGCAGGAGGTTAGACCTTCTGTTTCCTCAAGTGAACTGGGAACTTATGAAGAATGGAACAGGCAATTTGGGAGCTTAGCAAATTAA</cdnaseq>

Protein Sequence

<aaseq>MAEQSHAGDGGGGGAGSGEPTNWRKEADDRLRRLHSLQFGADVALEGKDPAGAQLAEKDVGCVFAKTGEVNIEKIKCSKYFQALLQKSKGHAAEQMKTTDCQESNIEEGPHVEENSTDMENEKLSIRASKLVMQRKLTSLRSHKPLKANVVQDGNMFKSVSNISNESVAVENGVRTNHTDNKYTAYMDLEDDDRPRGLLQNAKRKHAGFRSPICEHANSPLSNDEADAPANEFVTARTKLEMDSVQKYGHNGTQGASVSPQCDNNPNNRNYGVRPTWNSRRGLRGNFVPPIRNNGGSTSNMTSRVIGKNDDSMGDSTRKCLEMLCGPDGELPEKLRNLEPRLIEHVSNEIMDKDPNVRWDDIAGLEHAKKCVTEMGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVACCRQPAVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGFDSGNDQILLIEARAWIIRNLLEKDGLFKLTEEETNIVCKLTEGYSGSDMKNLVKDASMGPLREALQQGVGITKLNKEDMRPVMLKDFETALQEVRPSVSSSELGTYEEWNRQFGSLAN</aaseq>

Gene Sequence

<dnaseqindica>1..162#1933..2058#2361..2792#3542..3780#5311..5438#5505..5542#5703..5795#6252..6353#6434..6536#6971..7066#7161..7288#7476..7577#ATGGCGGAGCAGTCTCACGCCGGCGACGGCGGCGGCGGCGGCGCGGGCTCCGGGGAGCCGACGAACTGGAGGAAGGAGGCGGACGATAGGCTGCGGCGGCTCCACTCCCTCCAGTTCGGCGCGGACGTCGCGCTGGAGGGCAAGGACCCCGCGGGGGCGCAGGTGCTCGCGCTCCGCCTCCTCGGCTTCCTCGACTCGCAGGCCCTCCCCGGCGACGGCGGCGCGGCGGGCCACGAGGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCGTACACAGCCACGCCACCCCGCGCGCTCTCCCGCATTGTCGCCCAAATCATGCGTTGAGACGGCTCGCTGTGTTTACGAGGGTCTCCTCGATTCGATTCGGGCGAAGAATGGGAGCGATTTGGATGGATTTGCTTTCGCTATTATTCAGATTGTGCGAATATATAGAGCCATTAGCTGATACTGTAGTATTCACTTAATATGGTAGTTATATAGCTCTAGAAATCTGTGGATTTTGGAGAATTGCCGTGACTAAGATGAACTGGTACCGTGTGCACAAACAAGCAAGCTAAGTACTAGTGCCTCCACTGTTTGTGTTGGGTGGTTCTCGGGAGCTTGCTTTTATTTGTTTCCAAATACATTAAGCCATCTAATGTAATATTAGTATGCTATATACATTATATTTTGCTGGAATGGAAATAAAATAATACACGCTGCTCTTCCTCTTAGCATATAGTGTCTTTTTTATGCATGCTCTATGAAGCAAAACAATATTGACCAGAGCAGGTATAATGGTGCCGAAAGTCATGTGTAATTGTGGGAAAGTAATTTTTCAAAGCAAAGGGTACTCAAAGGTGATGGTCTATCTTCCACCATGATTAGTGGTATGTATATGTTGAATACATGTGGATCACATAATTCAAATTGCATATCCTGTTTAGGATTCGTTGCTCCCTATAGTAGGATTCAACCCACTAGACCTTGACTCAAGTTTAGAAATTGTTGTCTAAATAAATAGGGCCAAGAACATTTTTTCTTCTTATGTTGCACATTGCGTACTGAAATATTTTTGCCTTTTTGTTTGTGCTCATTGTTTAAGTGAGGAAGAAATCACCAGGTTACCACTGCGGCAGTGGTTGACATCAGCCTGTGTTTTGGTTCAATTTTAAGGTCCTCAGATCATTCCATGTATGTGCTAAGCATGTTTGAATTGACTAACATATTCATATACCACTACAAGTTAGATTCAGATATAAGTGTTGCAGGACATACACATGTCTTCATTATTAATGTGCTGCGATCTGGTAAATAACGATTGTGGCGTTGCAGAAATCACTGTCAGGGCTAAGCAAGTAAGCATGAAAGTTAAGGAGTGTCATTTGTGAAAATTCCGCAACATCGAACCAAGTTCTGCAAGGATGAATCCAACTTCTGATATTTGTAGTCAAAATAATTTTATAGTAGAGATGATAGCAGTAGCAGATATTATCAGGGTCAGGACTACTGGACTAGTAAATTTTTGGAAATGTGATTTCTTTTTGGTGGTGGTACGGATACCATATGCATTGGAGCATTAAGTTGCCATCACTGATGGAAACTGAGTGGCTTCTTGGGTTTAATCTTGAACAAATAGTTGTCTATTTCATTTTTGACCGGAAACAGTGAGGGAGGCCCCCACGGTATATTTTTCTTTATTTAAGTCTGAAATTCGCTCCCTTGGGGAGTTGAACCCAGGACGTAGAGGTGCTACTTGAGCAATGTAACCGCTAGAACAAATAATTGTCTGTTAAACCAAATTACTTTAGCTTTGTTCTGCACTGTTCAAGTTTATTTGTGATGCTCTGATGCATACTATCGTGATACTTGGTGTCAGTCCTCACTTTAGATGTTTTCGATTTCAGTGCTGTGTTTAAGCTTGCAGAAAAGGATGTTGGTTGTGTTTTTGCAAAGACAGGAGAAGTTAATATTGAAAAGATCAAGTGTTCAAAGTATTTTCAAGCACTTCTTCAGAAATCCAAAGGACATGCTGCTGAACAAATGGTACAATTCAATTTATGTTGTTAGGCTTTACGTGCTCAAAAGACCTTATTGTTCGTACTTCTCATTCTTAATTTTCTTCCTTCTTGAGGGACATCTAACCATTGCCCCATTTTTCTTAATTCTTTATTTACAACATCATTTCTGAAAGGTGATTTAACTCTTTTTAATGTTTTTTTTGTTGAAGCACCATATGAAGAAACACATAGCTTTCAACTTCCAATGTTAATTGTTTGCAAATTGTCATTGTTTGCTGGCTGATTTTATCATCATTTTCTCTTTTTGTGACATGAACTGAAATACAGAAGACCACTGATTGCCAAGAGTCCAACATTGAAGAAGGTCCGCATGTAGAGGAAAACTCAACTGATATGGAAAATGAGAAGCTTAGCATCAGGGCTTCAAAATTAGTAATGCAAAGAAAACTAACATCACTGCGTAGCCATAAGCCCCTGAAGGCAAATGTTGTACAAGATGGGAATATGTTCAAATCAGTGAGTAACATATCTAATGAGAGTGTTGCTGTCGAAAATGGAGTCAGAACAAATCATACTGATAACAAGTATACTGCTTATATGGATCTTGAAGATGATGACAGACCCCGTGGACTGTTGCAGAATGCAAAGCGAAAGCATGCAGGATTCAGAAGCCCAATCTGCGAACATGCAAATTCTCCATTAAGTAATGATGAAGCCGATGCCCCTGCCAATGAGTTTGTGACTGCCAGGACAAAGTTGGTACGCTCAGTGCTTTTATTCTATATTGTACAATTTTGGTAAATATTTAGAGTGCCTCTATTATTCTATGATCCTCCAACAAAAAGACATCGTAAGCACTAGTGGCATATGATAGTAGGTGTATTTAACTTCTGCATTTACTATTCGTGCCAAGACTCTTTCTATTATTTTAGCATCGCATAGTTTTGAAAATGGGTAGCTTCTTTGTTATGCTCGTTTATGCTTGCTGGTTTGCCACTATGGCAAATCCTGTGCATTTCTTAATGACCATTGGTTGATGGCAAATCCATATCATTTAACTGTTCTTTTTTTTTTTTTTACTTTTCTCTGTCTGCTGCATGCACTGCAGTCCTGAGCATTCTACATGTTACCTAACAAAGCATCATTAGGTAACAGTTAGCTAAAGTTAGAAATAAAGTTCTACTTATGGCATAGCTTGAAACCATGATATGTATTGCAGCATATTCTGTGCGAATATTTTATTTGTAAAAACGACAATTTTCCAGATCCTTATGGTGTTTCTTCTGAAATCATATAATTTTCAAGAAAACTCTTTTAGCAAGAGAATTATAATTTATTTTTTGGTGCTAAACACACAATATTTGCATTCTGGTGAAACCATTTTTGTGCGCTATGTGGCATCTGCCTTGCTGTGGTATCGTTATTAGGAGAGCTTAGTATTGCCATTCTGGTTTATGTTGAATATTTTGTCAATGTAACCTTCACTAGCTGATGCTTCTGTTTTCTAGGAGATGGATTCTGTGCAAAAGTATGGGCATAATGGTACTCAAGGTGCTTCTGTATCCCCACAATGTGATAACAACCCAAATAACCGGAATTATGGTGTGAGGCCAACCTGGAATTCTCGTCGTGGATTACGTGGTAATTTTGTTCCTCCTATCAGAAATAATGGAGGATCCACTTCCAATATGACCTCACGGGTCATTGGAAAAAATGATGATTCAATGGGAGATTCAACAAGAAAATGGTCTGTATTTCCATCTTGATCATATGATACCATTTGAATTTACTTTTATCTTCATGTTATTGTAACAATTTACATGACATTTACATAGCTATTTATCTCGTTGCTTTTCTTATGTTTAGCATGACTACATCTTTTCCTTTTTTTTCTAAGACTCAGATTTATTGGTACTAGAAGCAAAGTACATGAGATACATTTCTTTGACTTCATTGCCATAATGTGTTTTTTGTTTTGCAATTGAGATGACTAAGATTATCACTATCATATTCAGTATGATTGCCTTTCTTACATCTGTTTGGTGATTTGGACACTGGTTTGCATTTTTTGCTGGGTATCCTTGTTGTAGACGTTGCTTTAAAGTCAATGTAGTGTGTTAAAGAACTAGGCAAATTTCTGGATGGCAATATTACCTGTCACTTAACAATTTCAGAACAAGAGTATGAATTGATCAAGTGGATATAGCAGCATTAGTATGATAATAGATATTTGCTAAATGTGAAAAAAAAATAAAAACTACTACTAGTTTCTATTAATACAGTGTGTTTGAAATTCCTTGACCACTAGTGCAAGCTAATCTTGAACTCCCAATGTGAGACAAGCATATGGAGTACCCATTAGGCCATTATTTTAAATAACTCTGTGTAGCCCTGATATAACGGTCATGATCCGGGGGTAGTTGTGTCTGCACAACAGCTGTCTGTGGCTCTATGTACAGTTCCGGGTCCACTGAGGCCTTCTATTTCTTGCTACAATCTGCTGCAGCCACTGTAAAGTATGATGTGTAGCGCTTTAAACATATTTTTGGTTTTCATACGATTGATTTGTTGCATTGATTTCAATTTGCATTTTAAATCAGTAATCGTAAGCTTAAGATCTGCATGGAAACCAGGGTTGTTTTTTTTTGCCACTAAGGAAAGATCGTATCTCACTTTTGCCCTGTGCATTTTGTTTTTGCCACTGGGGCTAGCACAATAAGTGGCAAAAGTGAGATCTTCATACAACTTAAGTCATTTGATATCACAAGTGACAACTCTAACATTATTTACAGCTAGCTGAGAATGTTCCATTTTCTATTATCTATCTACTGTACAAAAAACACTTTGTTACACTCTCAAAACACACTGATCACCAAGTAATTGTTGGATGTTGAATGTGTGAATGAGTTTAATTGTCTTAAGAATCAGAGTGAATGCTCTCAGCCACTGTAATTACTCATCTGTCTAAATTTTGACATTTGTTTGAATCATTTATCTGCATAACTGAAGGCACATAGTTGAAGTGCGCTAAAAGGAGCATGAAAATTACTAATATCGTTTCTTATTGCATAATTCATTCTAGTTTGTCTGATGTGCTCAATAAGGAGCATTCAAATAACTAATATTGTTTCTTTCATTTAGCTTATTTTGCATCAATCATTCTAGTCTGTTTGATGTAGATTGTATATGCATAATTTGAGCTTAATCAATTTTCAGTATTCAACATAATTGGTGTTATTTATGTTCATATCTCACAAATGTATTTCACTATCATCAGTTTAGAAATGCTTTGTGGACCTGATGGTGAGCTTCCTGAGAAGCTGAGAAATCTGGAACCTCGCCTAATTGAGCATGTCAGTAATGAAATAATGGATAAAGATCCTAATGTCCGCTGGGATGACATAGGTACATAATTGCATTCTAGTACTTTCAGAACTTGTCTTGTAGCTAATTCATGCCAACCTGCAATAGCTGGTTTGGAACATGCAAAGAAGTGCGTGACGGAAATGGTGATATGGCCACTGCTACGTCCAGACATCTTTCGCGGTTGTCGGTCTCCTGGAAGAGGTCTTCTATTGTTTGGACCTCCTGTGGGTATTTATCTCATCTGGTTATGTTGCTCTTCCCCCATTTTATTCAATTTAAAGATAAGTGCATTAATTTCCACAGGGAACAGGCAAAACCATGATTGGAAAAGCAATAGCTGGTGAAGCCAAGGCAACATTTTTCTACATTTCTGCAAGTTCACTGACAAGCAAATGGGTCTGTCTGCTGCTTGTTTTAATTTTCAACATAGTTCCATTTGTATCCTATAAAGTCAAGGCTAGTTACATCTTTCTGGTCTGCATATCTTTAATCAATCATAAAGGTGCTACGGAAAACAAATTCATTTGTTTATATGCTAATAAATCCATCTTATTAATGTTTTCAAAGAATTATAGTCTATATGGATTAGAACCAAGATTTAGTACAAGCGTGGAACATGCTTGTACTCCCTACAATTGTTTGTGATCTCTCTCACTTGCTAATTCTCTCATCCCAGCCTTTATATGCCCTCTCCTCAGAAAGTAGAAATCCTAATCTCTGTCAAACTATGTTTGCCCATTTTGTGCACAGTAATTACGCAATCTTTTTTTTTCAAAAAAAAATACATTATGACATAGAATGTGAAGGCATACCTTTAGATTGATAATGATTGTTAATTCTCCTGCTGTGCAGATTGGCGAGGGTGAAAAGCTAGTTCGAGCACTATTTGGGGTGGCCTGTTGTCGTCAGCCAGCTGTCATATTTGTGGATGAGATTGATTCACTACTATCACAGGTTTTTCTTAGTGAATTGTTTTTGTTATGCACATACATGTTGCATCAGTTGACACCTAACACCCTTACACATGATTTCAGCGCAAATCAGATGGTGAACATGAGTCAAGTAGGAGGTTGAAAACACAGTTTCTAATCGAGATGGAAGGTTTTGACAGTGGAAATGATCAAATTTTACTTATAGGTACCTCATGCGTTAAAAAGATGAAAATATCAAGTGTGATATGCATTAATGTATGTCATGGTAGGAATTACAGGATATTTATATGTATGAGGTTTGAGCATCAACATAGTATGTGCTTTTCTATTGTCCTTGTGAAATGCATTATTGCATATCCATCTTTGCCTAAAGGCCTATGCTTTGAAGTTGTGTTGCATAGTCTATGAGGTGGATGTTAAATGTGGGGTCATAACCAATGGTGGAACTTAGATTGGGCTGATGTCATGGAGAAAAAATGATGGCAGGAGCAACAAACAGACCTCAAGAACTGGATGAAGCAGCACGGAGGCGACTTACAAAACGTCTATATATTCCCCTTCCTTCATCAGGTAATGTTCTATTTCTGTTCTTATGGGGATAACTTCAGGAATCTCATTGTTCCATGGTTTATTTTAAAGAGGCACGGGCCTGGATAATTCGCAATCTATTGGAGAAGGATGGCCTTTTCAAGCTCACAGAGGAAGAAACAAATATTGTTTGCAAGTTAACAGAAGGTACTCATAATCATCCAGGTTTCTTCTTGTTGCTGCTAATTCTGAGGTATCATGCCATCTTTCTGGATATTTCTGCATCATTGGTTATCTGCAGGTTACTCAGGATCTGACATGAAAAATCTTGTGAAAGATGCCTCAATGGGACCACTAAGGGAAGCTCTTCAACAGGGTGTTGGCATAACAAAGCTAAACAAGGAGGACATGCGGCCGGTGATGCTCAAGGTACTACTATTCTAGTCAAATAAGTGCTGGAATCTAGATAGCTAGGCACTTATGATCACTAAAAGGATAAACAATTGATTGCATTGTCTATTGCATTGTCAAATAAGTGTGTCCTTTGTTGCGATGAATCATTCCCAAAATGTAGCATTCCGATTTTAAAAGCTTATTTTGAATTTTGGATCTGTAGGATTTTGAGACTGCTTTGCAGGAGGTTAGACCTTCTGTTTCCTCAAGTGAACTGGGAACTTATGAAGAATGGAACAGGCAATTTGGGAGCTTAGCAAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036244

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