BGIOSGA036248

From RiceWiki
Revision as of 08:18, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036248| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036248, complete gene.| tag = OS12G04...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036248

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036248, complete gene.

LocusTag

OS12G0442800

Ensembl Transcript ID

BGIOSGA036248-TA

Ensembl Protein ID

BGIOSGA036248-PA

Length

2831

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:12361606..12364436

Sequence Coding Region

12364350..12364436,12364106..12364221,12363939..12364001,12363801..12363837,12363633..12363714
,12363198..12363316,12363009..12363104,12362765..12362875,12362581..12362682
,12362162..12362209,12361860..12362075,12361606..12361731

Genome Context

<gbrowseImage1> name=IndicaChromosome12:12361606..12364436 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:12361606..12364436 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATGCGGCAGGGAGCGCTGCGAGGCCCCTCCGATTACTCCCAGGAGCCCACCCGCCACCCCTCCCTGCGCATCAACGCCAAGGAGCCGTTCAATGCGGAGGCGACGAGGCGGGACCTCGTGGCGTCCTACATCACCCCCGTGGATCTCTTCCTCAAGAGGAACCATGGCCCCATCCCCATCCTCCACGACATCGACAGCTACTATGTGACGGTTGCCGGTCTGATAGAGAGGCCAGCGAAGCTTTATCTGAATGACATCAAGAAGCTGCCCAAGTACAATGTCACTGCCACTCTGCAGTGTGCAGGGAACAGGAGGACCGAAATGAGCAAGAGCAGGAAGGTGAGAGGCGTCGGATGGGATGTCTGCGCTCTCGGGAATGCGACATGGGGAGGAGCTAAGTTATCTGATGTCCTTCAGCTCATTGGTGTGCCATATCATACTGAAATTACTCCATCAGGAGGAAAGCATGTTGAGTTCACTAGTGTAGATCAGTGCCCTGAGGAAAAAGGTGGCCCTTACAAAGCATCGATTCCTTTAGGCCATGCAACAAATCCTGCAGCAGATGTACTGGTTGCATATGAAATGAATGGTGAGGTGCTCAAGCGTGATCATGGATACCCTCTCCGTGTCGTAGTTCCAGGTGTGATTGGTGCTCGTTCAGTCAAATGGTTGGACAGAGTTGACATAATTGAGGAAGAGTGTCAGGGTTTCTTTATGCAAAAGGATTACAAAATGTTCCCTCCATCTGTTGATTGGGACAATATTGTGTGGTCAACCAGGAAGCCCCAAATGGACTACCCAGTTCAGTCTGCCATATGCTCTTTGGAAGACACAAATGCCATCATTCCAGGAGAAGTGACTGTCACTGGATATGCGTTGTCAGGAGGCGGCCGAGGTATTGAAAGGGTGGATATATCCACTGACGGTGGCAAGACTTGGTTCGGTGCTGTCCGGTACCAAAAGGAAGGTGTACCATACGTCGCAGGTGACATAAGTAGTGACAAGTGGGCTTGGGTTCTCTTCAAGACTGTTATCGATGTGAAAGGTGACACGGAGGTTATCGTAAAAGCGGTTGATTCCAGTGCAAATGTGCAACCTGAGAGCGTGGAGACCATATGGAACCTTAGAGGGATCCTGAACACCTGCTGGCACCGTGTTCGCCTTCTGACAATACACAACCTTAGAAGCCTTTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MAMRQGALRGPSDYSQEPTRHPSLRINAKEPFNAEATRRDLVASYITPVDLFLKRNHGPIPILHDIDSYYVTVAGLIERPAKLYLNDIKKLPKYNVTATLQCAGNRRTEMSKSRKVRGVGWDVCALGNATWGGAKLSDVLQLIGVPYHTEITPSGGKHVEFTSVDQCPEEKGGPYKASIPLGHATNPAADVLVAYEMNGEVLKRDHGYPLRVVVPGVIGARSVKWLDRVDIIEEECQGFFMQKDYKMFPPSVDWDNIVWSTRKPQMDYPVQSAICSLEDTNAIIPGEVTVTGYALSGGGRGIERVDISTDGGKTWFGAVRYQKEGVPYVAGDISSDKWAWVLFKTVIDVKGDTEVIVKAVDSSANVQPESVETIWNLRGILNTCWHRVRLLTIHNLRSLL</aaseq>

Gene Sequence

<dnaseqindica>1..87#216..331#436..498#600..636#723..804#1121..1239#1333..1428#1562..1672#1755..1856#2228..2275#2362..2577#2706..2831#ATGGCGATGCGGCAGGGAGCGCTGCGAGGCCCCTCCGATTACTCCCAGGAGCCCACCCGCCACCCCTCCCTGCGCATCAACGCCAAGGTGCCGGCCGTGATCGCAGCAGCAAGAATCGCATCTTCTTCCTTGAGTTTCTACTCGTACGTACTCGCGTTGAGTTCTTTTGTCGCGCAAGTAAAATGTGTTTTTTGGGGGGCGATGGATGCGTGCAGGAGCCGTTCAATGCGGAGGCGACGAGGCGGGACCTCGTGGCGTCCTACATCACCCCCGTGGATCTCTTCCTCAAGAGGAACCATGGCCCCATCCCCATCCTCCACGACATCGACAGGTACGGTTCTTGATTTGTATTTCCTCTCTTTGCCTGATTTATTTTTGTCACCTTCTTAGTTTCAACTTAAAATGGTTTCAGTCTTTTGTTTTGTGGATTTGCAGCTACTATGTGACGGTTGCCGGTCTGATAGAGAGGCCAGCGAAGCTTTATCTGAATGACATCAAGTGAGTCGTGTGTCAGTCATCGTGGCTGTGCTATGCATGCCTTCTGTTTGATGATATGCCTGAGAGGTGATCGAGTTTTTTCGTGCTTTCTTTGTGTGCAGGAAGCTGCCCAAGTACAATGTCACTGCCACTCTGCAGGTGGATTTTGGTGTCCTGGTGGACTGGTGGTGTGTGTGTGGATTCTTAGGGCCGAATTTTGTGTGACATGGTTTCGATTGGTTCAGTGTGCAGGGAACAGGAGGACCGAAATGAGCAAGAGCAGGAAGGTGAGAGGCGTCGGATGGGATGTCTGCGCTCTCGGGAATGGTTAGTGTGCTTCACTTCTCAATCTTCTTTGTGTCTTACTGTTAGCGTGGTGGAATACGGCAAAAGGAAGAAAGAAAGAAAAAAGATGCATGGACATTCTCCAGTTAAGTGTGTATAGGAAGTTGTCATCACTCACCAATGTAATAAGGAAACCTGTCTTATATGATCTTAGCTGCAATTTTGAATAGAAGTGAGTTCCATGAGATTGATAAAGGATGTGCTGTAAATGTTTAACTTAATTCTTCTGCACTTTTTTACTGTCTTCGATGCATAATCATCATATTCACTGTCACTGAATTTATGTGCTTCATTTTAGCGACATGGGGAGGAGCTAAGTTATCTGATGTCCTTCAGCTCATTGGTGTGCCATATCATACTGAAATTACTCCATCAGGAGGAAAGCATGTTGAGTTCACTAGTGTAGATCAGTGCCCTGTGAGTTTCTTGAGACTTCATTTATGAAAAAAATATATATATATGACAGCTTTAGTTATTTTTTCTATAACATCTTTTTCAAAATATTATTAGGAGGAAAAAGGTGGCCCTTACAAAGCATCGATTCCTTTAGGCCATGCAACAAATCCTGCAGCAGATGTACTGGTTGCATATGAAATGAATGGTGAGGTAGGACCATAGGAGATAATAATAGGTTATATCTTATATACCATCCTTACATCCATCTATCAGGATATTTGGTTATTTCATATATCTGTGCATTTTTCTAATCATATCCCTATTATGTGTTTTTGTTACAAAGGTGCTCAAGCGTGATCATGGATACCCTCTCCGTGTCGTAGTTCCAGGTGTGATTGGTGCTCGTTCAGTCAAATGGTTGGACAGAGTTGACATAATTGAGGAAGAGTGTCAGGTATGCATTATCTAACTTCTTGTCAATATGTAAATATATTTTCAGTTTGCTAAAAAGATTTTTGAAACTCGTTCATTTTCAGGGTTTCTTTATGCAAAAGGATTACAAAATGTTCCCTCCATCTGTTGATTGGGACAATATTGTGTGGTCAACCAGGAAGCCCCAAATGGACTACCCAGTTCAGGTGTTAATTCTTAACCGTCTTGTTTCCACACAGTAAGAGCAAGAGCAACTATAGCAAATTGAGCAATTCAGAAACAAAAAACATCATGTTCCTAACCATGAAAAGTCTGAGTATACAAGGAATTTCCAGTATACATCATTTCGATACAACAGCATATTGGAATGAGGATGGCATCCGTATTTTGTGCTGCTTATCTAAATATCACACAGTAAACTACATGAAGTTCTGTTTCCAATTTACATTGTCATATATTCTATTTTGCCATGCAAAACCTTACTGTAACAGTAATTTCCTCTAGTAATTTACTGTATTGCATAATATTGAAAAATTGTGTGCACTAATTACCTTTTGGACCGACTCTGATATTTCAGTCTGCCATATGCTCTTTGGAAGACACAAATGCCATCATTCCAGGAGAAGTGAGTTCAGCTTCTTAACTGGGCTTTTTTATTTCCATTTTGCTTCATGACTTACCCCTAACGCTTTGCCTTATTGTGCTCTTCAGGTGACTGTCACTGGATATGCGTTGTCAGGAGGCGGCCGAGGTATTGAAAGGGTGGATATATCCACTGACGGTGGCAAGACTTGGTTCGGTGCTGTCCGGTACCAAAAGGAAGGTGTACCATACGTCGCAGGTGACATAAGTAGTGACAAGTGGGCTTGGGTTCTCTTCAAGACTGTTATCGATGTGAAAGGTGACACGGAGGTTATCGTAAAAGCGGTATGCTATCTTGCTAGTTCGTCCTACTTGCAATTCAATGTTGTTTTTTCTGTTCCATTTTACATATTGGCTGCAGGATTGTTCATTCTAATATAAATGTACTGAATCTTGTGGCACAAACTATGCAGGTTGATTCCAGTGCAAATGTGCAACCTGAGAGCGTGGAGACCATATGGAACCTTAGAGGGATCCTGAACACCTGCTGGCACCGTGTTCGCCTTCTGACAATACACAACCTTAGAAGCCTTTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036248