BGIOSGA036255

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Revision as of 08:18, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036255| Description = BGIOSGA036255| Definition = Oryza sativa Indica Group BGIOSGA036255, complete gene.| tag = | tid = BGIOSGA036255-TA|...")
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Gene Name

BGIOSGA036255

Description

BGIOSGA036255

Definition

Oryza sativa Indica Group BGIOSGA036255, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA036255-TA

Ensembl Protein ID

BGIOSGA036255-PA

Length

2319

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:12108188..12110506

Sequence Coding Region

12110186..12110506,12109728..12110090,12108188..12108487

Genome Context

<gbrowseImage1> name=IndicaChromosome12:12108188..12110506 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:12108188..12110506 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCACTCAGAGCAATGACCACGGTGCTGGCCTCCTCGATGCACAGCTCGAGCTCTACGCCAACACGTTGGCCGGGGTCAAGTCCATGGCCCTCAAGACCGCCATGGACCTCGGCATCGCCGACGCCATCCACCACCACGGCGGCGCCGCCACCCTGCCCCAGATACTCACCAGGGTCACGCTCCACCCCTCCAAGATCCCGTGCCTGCGCCGCCTCATGCGCGTGCTCACCCTCACCGGCGTCTTCGCCGTCGAGAAGCCTACTGCGGCCGATGAGCCGCCCGTCTACGCGCTCACGCCGGTGTCCCGTCTCCTGCGCGAGCTGCCGGGCTCGTCCATCTTCGAGCACACCCATGGCCGGAGCTTGTGGGAGGTGGCCGACGGCGACGCCGCCTTCAGCAAGGTCTTCAACGACGCGATGGTCTCCGACAGCCGCCTGGTGATGGACGTCGTCGTCAGGGAGCACGGCGAGGTGTTCCGGGGGATCAGCTCGCTGGTGGACGTCGCCGGGGGCCACGGCACGGCGGCGCAGGCCATCGCCAGGGCGTTCCCGGAGGTGAAGTGCAGCGTGATGGACCTCGCCCACGTCGTCGCCAAGGCTCCCGGTGGCACCGGCGTGGAGTACATCGCCGGCGACATGTTCGAGAGCATTCCACCGGCAAACGCTGTCTTCCTCAAGTGGATTATGCATGACTGGGGTGATGACGAATGTGTCAAGGTACTAAAGAATGCCAAAAAAGCTATCCCCTCTAAGGATGCCGGAGGAAAGGTGATAATCATAGATGTTGTGGTCGGAGCAGGTCCGCCTGATCAAAAACATATAGAGCTGCAAGCNTTGTTTGGTGCATACATGATGCTTATCAATGGTGTCGAGCGAGATGAGAAAGAGTGGAAGAAGGTTTTTATCGAAGCAGGGTTTAGTGGCTACAAGATCATACCGGTTCTAGGCTTTCGGTCAATCATCGAGGTTTACCCCTGA</cdnaseq>

Protein Sequence

<aaseq>MATTQSNDHGAGLLDAQLELYANTLAGVKSMALKTAMDLGIADAIHHHGGAATLPQILTRVTLHPSKIPCLRRLMRVLTLTGVFAVEKPTAADEPPVYALTPVSRLLRELPGSSIFEHTHGRSLWEVADGDAAFSKVFNDAMVSDSRLVMDVVVREHGEVFRGISSLVDVAGGHGTAAQAIARAFPEVKCSVMDLAHVVAKAPGGTGVEYIAGDMFESIPPANAVFLKWIMHDWGDDECVKVLKNAKKAIPSKDAGGKVIIIDVVVGAGPPDQKHIELQALFGAYMMLINGVERDEKEWKKVFIEAGFSGYKIIPVLGFRSIIEVYP</aaseq>

Gene Sequence

<dnaseqindica>1..321#417..779#2020..2319#ATGGCGACCACTCAGAGCAATGACCACGGTGCTGGCCTCCTCGATGCACAGCTCGAGCTCTACGCCAACACGTTGGCCGGGGTCAAGTCCATGGCCCTCAAGACCGCCATGGACCTCGGCATCGCCGACGCCATCCACCACCACGGCGGCGCCGCCACCCTGCCCCAGATACTCACCAGGGTCACGCTCCACCCCTCCAAGATCCCGTGCCTGCGCCGCCTCATGCGCGTGCTCACCCTCACCGGCGTCTTCGCCGTCGAGAAGCCTACTGCGGCCGATGAGCCGCCCGTCTACGCGCTCACGCCGGTGTCCCGTCTCCTGGTCAGCTCGGGAACCTGCAGCAGGCGCCCATCATGTCGTTGCTGCTCCACCCGAGCTGCATCACCCCCTTCCTCCGGATCGGCGACTGGCTCCAGCGCGAGCTGCCGGGCTCGTCCATCTTCGAGCACACCCATGGCCGGAGCTTGTGGGAGGTGGCCGACGGCGACGCCGCCTTCAGCAAGGTCTTCAACGACGCGATGGTCTCCGACAGCCGCCTGGTGATGGACGTCGTCGTCAGGGAGCACGGCGAGGTGTTCCGGGGGATCAGCTCGCTGGTGGACGTCGCCGGGGGCCACGGCACGGCGGCGCAGGCCATCGCCAGGGCGTTCCCGGAGGTGAAGTGCAGCGTGATGGACCTCGCCCACGTCGTCGCCAAGGCTCCCGGTGGCACCGGCGTGGAGTACATCGCCGGCGACATGTTCGAGAGCATTCCACCGGCAAACGCTGTCTTCCTCAAGGTATTCGTCTCCTTTTTCTCTTGCTCATCAGCTGTTACTTCCATACTTTGTTGTAATAGATGCCTACTTACGCTCTTTGCTCAGCATGGAATTGTCCTCGATCGAAGGCATGCATGTGAAATGGAAATTGAACTAGATAAAACCACGTCTGCATGCATTGCTATTGATGGTAATTAATGGATCCATAGTTTATCGATCACTAAATAACTAATTACTATACATAATTAATACGAGCACCCGAACATGAACCCGGCTCATTGAACTCAATGGCTTTAATAACACAGATAAACTAATACTACCCGAACATCTCGATTTTGTATTTTTTTTTCTTAAAGAATAACCAAATCAGTCTGAGCCACCTTTCATTACCCATCAAAGATTCGGTTTTAACCGCCGGTTTATCTGAACTTTTTTTTCACTATGAAACAGGTAGTTTACCTTTTTTTATACTACACTTTGGACTACGTACCCCGACTCTCTTCTTACGCACACCAATAGCATCGAGTACAGTGGCTCCCGCACGCCGATGAACTCCCGTAGCTGTATGCATGAATACCACAACTTTAAAGTGTATAAGAGGGTTTTGATTGTTCAAAGTGCCACAAAGTATAATTTATGTAGTGAAAAGTAAGAAGGTTAGATAAATTAATGATGGTCCAAACCGAAACCAGGCTAACAAAATGGTGGCCCAAACTTGCAATTCATTCTTTAAACTAATAATTAGCATGTCGTGTCCATAGTTAAAAAAATCAGACTGGGTCAACGGTTGAACCGGAAAAAACCGGAACCACCATCCTTTTGTCGGGTCGGTTTGCTGCAAACACCAGACATGCAATTGGACCGCTGCGAACCGCGTGAACCGGACGGTTTTATGTGAAAAATATGAGGTCATGATTAAGATGGGCTCACTATGTAATTTTATTTATAATTCATAAAATAATTTCAGAAAATAAAATTAACCAAATACGAAGCTGTACTCGGCTTGTGTTAATTTTATTTTTTCAATCATTTATTTTTTAAAAATTCCAAATTACTTAAATATGAACTTAATCTGGTCTTATATTCTGAATTTAATTATTTCACTAATATAATAATGCCAAAATTTTGAAATCAATAATTAACTATTTGTAACTGGTACAGTGTTTTGTTTTAATCTGAGCCATAATTTATAACTTCTAACTGGAAGGAAGTGTTATGTATTTACATTGTGGCTCTCTTGGTATTTTTGCTTTATTTTCAGTGGATTATGCATGACTGGGGTGATGACGAATGTGTCAAGGTACTAAAGAATGCCAAAAAAGCTATCCCCTCTAAGGATGCCGGAGGAAAGGTGATAATCATAGATGTTGTGGTCGGAGCAGGTCCGCCTGATCAAAAACATATAGAGCTGCAAGCNTTGTTTGGTGCATACATGATGCTTATCAATGGTGTCGAGCGAGATGAGAAAGAGTGGAAGAAGGTTTTTATCGAAGCAGGGTTTAGTGGCTACAAGATCATACCGGTTCTAGGCTTTCGGTCAATCATCGAGGTTTACCCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036255