BGIOSGA036275

From RiceWiki
Revision as of 08:19, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036275| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036275, complete gene.| tag = NCED2| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036275

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036275, complete gene.

LocusTag

NCED2

Ensembl Transcript ID

BGIOSGA036275-TA

Ensembl Protein ID

BGIOSGA036275-PA

Length

1731

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:11438571..11440301

Sequence Coding Region

11438571..11440301

Genome Context

<gbrowseImage1> name=IndicaChromosome12:11438571..11440301 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:11438571..11440301 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGTACCCATTGCTGCCATGACTTTTGCCCACCCAGCCAATGTTATGACTCTGGCTTCAAGGCAGCCAAAGAGTAAAAGGTCCCATATCTCCCCTGCTACCACGGCTCACCGTAATCTACAGACTCGCCTGGCTCACCACCACTATGCAACACCAGCTTCATTGCCTATGGCAATCTGCAACACAGTAGACAAAGTGATCAATAGGTTCATTGACCTGCCGGAGCAGCGACCAACGGTGGATCCGCGGCGTGTGCTCTCTGGCAACTTCGCTCCTGTTGATGAGCTGCCCCCGACAAGCTGCCATGTCATCCGCGGCTCCATCCCAAGCTGCCTCGCTGGTGGGGTCTACATCCGCAATGGTCCCAACCCACAGCACCGGCTTCCCCAGCGAACACACCACCTCTTCGATGGTGATGGCATGCTCCACTCCCTTCTCCTTCCCTCGGCCTCGTCAACACTGTTGTCGGAGCCTGTGCTTTGTTCACGCTATGTGCACACGTACAAGTATCTCTTGGAGCGTGAGACCGGAGGACCGGTTTTACCAAACTTCTTCGCTGGCTTCCATGGAGTGGCCGGCTTGGCTCGTGCAGCGGTCATGATCGCAAGAGTGCTTGCTGGTCAAATTAACCTGAACAAGGGCTTCGGGCTGGCCAACACTAGCATCACTCTTTTTGCAGATTGCCTATATGCGCTATGCGAATCTGACCTTCCCTACTCCATGCACATCAACCCAGCCAACGGAGAAGTCACCACACTTGGTCGATGTGACTTTGGTGGTGATCTTTCTTTTAGGATGACAGCACACCCCAAGAAGGACCCGGTCACCATGGAGTTGTTTGCTTTTCGCTACAATGTCTTCCAACCATTCATAACATACTTCTGGTTCGATCGAGCTGGCAGCAAGGTCGCAGATGTGCCCATCTTGTCCTTGCAGAAACCATCGGTGATGCATGACTTTGCAATAACAGAGAGATATGCAATCTTTCCAGAGTCACAACTCATCGTTAATCCCATGGACATGGTCATGCGGGGGAGCTCGTTGGTAGGATTGGACCGTACCATGGTGCCACGGATTGGCGTGCTTCCAAGGTACGCCAAGGATGAGTCAGACATGAGATGGTTTGAGGTGCCTAGATTTAATATGTTGCACACGACGAATGGTTGGGAAGAGGCTGATGGAGAGGAGATTGTGCTCGTGGCACCCAATATCCTATCTATCGAACACATGCTAGGAAACATGGAGCTCATGCAAGCTCGTGTCGACATGGTACGCATCAACCTCTGCACCGGTGACGTCTCGTGCACTGCGCTCTCACCGGAGAGCCTTGAGTTCGGTGTCATCCATCAAGGTTATGTTGGTCGCAAAAATCGCTATGGCTACTTTGGTGTAAGTGGTCCGTTGCCCAAGATCAAGGGGATAAGAAAGCTTGACTTTGATCTCGTCGGCTCTGGTGATTGCACGGTTGGACGTCGTGACTTTGGTCTAGGGTGCTTTGCTGGGGAACCATTTTTTGTTCCAGACAACATCGACGGGTATGGAAACGAGGATAGTGGTTATGTGGTGTGCTACACCCATGAAGAGGACACCGGAGAGAGTTGGTTTGTGGTGATGGATGCAAAGTCTCCAGAGCTAGACATTGTTGCAGAAGTGCAACTTCCTAGTCGTATCCCCTATGGCTTTCATGGTATTTTTGTCAAACAGGCCGAACTTCTCGCACAACAATAA</cdnaseq>

Protein Sequence

<aaseq>MEVPIAAMTFAHPANVMTLASRQPKSKRSHISPATTAHRNLQTRLAHHHYATPASLPMAICNTVDKVINRFIDLPEQRPTVDPRRVLSGNFAPVDELPPTSCHVIRGSIPSCLAGGVYIRNGPNPQHRLPQRTHHLFDGDGMLHSLLLPSASSTLLSEPVLCSRYVHTYKYLLERETGGPVLPNFFAGFHGVAGLARAAVMIARVLAGQINLNKGFGLANTSITLFADCLYALCESDLPYSMHINPANGEVTTLGRCDFGGDLSFRMTAHPKKDPVTMELFAFRYNVFQPFITYFWFDRAGSKVADVPILSLQKPSVMHDFAITERYAIFPESQLIVNPMDMVMRGSSLVGLDRTMVPRIGVLPRYAKDESDMRWFEVPRFNMLHTTNGWEEADGEEIVLVAPNILSIEHMLGNMELMQARVDMVRINLCTGDVSCTALSPESLEFGVIHQGYVGRKNRYGYFGVSGPLPKIKGIRKLDFDLVGSGDCTVGRRDFGLGCFAGEPFFVPDNIDGYGNEDSGYVVCYTHEEDTGESWFVVMDAKSPELDIVAEVQLPSRIPYGFHGIFVKQAELLAQQ</aaseq>

Gene Sequence

<dnaseqindica>1..1731#ATGGAGGTACCCATTGCTGCCATGACTTTTGCCCACCCAGCCAATGTTATGACTCTGGCTTCAAGGCAGCCAAAGAGTAAAAGGTCCCATATCTCCCCTGCTACCACGGCTCACCGTAATCTACAGACTCGCCTGGCTCACCACCACTATGCAACACCAGCTTCATTGCCTATGGCAATCTGCAACACAGTAGACAAAGTGATCAATAGGTTCATTGACCTGCCGGAGCAGCGACCAACGGTGGATCCGCGGCGTGTGCTCTCTGGCAACTTCGCTCCTGTTGATGAGCTGCCCCCGACAAGCTGCCATGTCATCCGCGGCTCCATCCCAAGCTGCCTCGCTGGTGGGGTCTACATCCGCAATGGTCCCAACCCACAGCACCGGCTTCCCCAGCGAACACACCACCTCTTCGATGGTGATGGCATGCTCCACTCCCTTCTCCTTCCCTCGGCCTCGTCAACACTGTTGTCGGAGCCTGTGCTTTGTTCACGCTATGTGCACACGTACAAGTATCTCTTGGAGCGTGAGACCGGAGGACCGGTTTTACCAAACTTCTTCGCTGGCTTCCATGGAGTGGCCGGCTTGGCTCGTGCAGCGGTCATGATCGCAAGAGTGCTTGCTGGTCAAATTAACCTGAACAAGGGCTTCGGGCTGGCCAACACTAGCATCACTCTTTTTGCAGATTGCCTATATGCGCTATGCGAATCTGACCTTCCCTACTCCATGCACATCAACCCAGCCAACGGAGAAGTCACCACACTTGGTCGATGTGACTTTGGTGGTGATCTTTCTTTTAGGATGACAGCACACCCCAAGAAGGACCCGGTCACCATGGAGTTGTTTGCTTTTCGCTACAATGTCTTCCAACCATTCATAACATACTTCTGGTTCGATCGAGCTGGCAGCAAGGTCGCAGATGTGCCCATCTTGTCCTTGCAGAAACCATCGGTGATGCATGACTTTGCAATAACAGAGAGATATGCAATCTTTCCAGAGTCACAACTCATCGTTAATCCCATGGACATGGTCATGCGGGGGAGCTCGTTGGTAGGATTGGACCGTACCATGGTGCCACGGATTGGCGTGCTTCCAAGGTACGCCAAGGATGAGTCAGACATGAGATGGTTTGAGGTGCCTAGATTTAATATGTTGCACACGACGAATGGTTGGGAAGAGGCTGATGGAGAGGAGATTGTGCTCGTGGCACCCAATATCCTATCTATCGAACACATGCTAGGAAACATGGAGCTCATGCAAGCTCGTGTCGACATGGTACGCATCAACCTCTGCACCGGTGACGTCTCGTGCACTGCGCTCTCACCGGAGAGCCTTGAGTTCGGTGTCATCCATCAAGGTTATGTTGGTCGCAAAAATCGCTATGGCTACTTTGGTGTAAGTGGTCCGTTGCCCAAGATCAAGGGGATAAGAAAGCTTGACTTTGATCTCGTCGGCTCTGGTGATTGCACGGTTGGACGTCGTGACTTTGGTCTAGGGTGCTTTGCTGGGGAACCATTTTTTGTTCCAGACAACATCGACGGGTATGGAAACGAGGATAGTGGTTATGTGGTGTGCTACACCCATGAAGAGGACACCGGAGAGAGTTGGTTTGTGGTGATGGATGCAAAGTCTCCAGAGCTAGACATTGTTGCAGAAGTGCAACTTCCTAGTCGTATCCCCTATGGCTTTCATGGTATTTTTGTCAAACAGGCCGAACTTCTCGCACAACAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036275