Os09g0370500

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Revision as of 07:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0370500| Description = VQ domain containing protein| Version = NM_001188875.1 GI:297726880 GeneID:9271090| Length = 1317 bp| Definition = ...")
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Gene Name

Os09g0370500

Description

VQ domain containing protein

Version

NM_001188875.1 GI:297726880 GeneID:9271090

Length

1317 bp

Definition

Oryza sativa Japonica Group Os09g0370500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12924378..12925694

Sequence Coding Region

12924378..12925694

Expression

GEO Profiles:Os09g0370500

Genome Context

<gbrowseImage1> name=NC_008402:12924378..12925694 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:12924378..12925694 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattctggtaatagtggagggagtctccagtcgtcgagcggcggcgacgacgagttcgattcgcggggaggcggtggtggtggtggggtggactcctcgccgctgtcggcgctgctccgcccctcctcgtcgtcggggttctcgctccacggcggatcgatgtacgggttccaggagctcggctcggtggggacgtcgttgcagcatcagcagggggtgcagctgcagccctggtcggcggcgcagttcgcggcgggggcgccgtcctcgtcgtcgccgcgtgtcgccgccgacgcgggcgtggcgggggcgcaccagcagcagcagcagcagcagcagggtgatccgtcgtcagagggggcgggggcgggggcggcggtggccgcggcgccggcgagggggtcgaggaagcggacgcgggcgtcgcggcgggcgcccacgacggtgctgaccaccgacacctccaacttccgcgccatggtgcaggagttcaccgggatcccttcgccgccgttcgtcgcgggcgtcggggcacccgccgcctcgctccgcacgcgcttcgaccacctcttcccctcgccggcgtccgccctccgctccgccgccgccggcgatccggcctcctcgctgccgccgtacctcctccgccccttcgcgcagaagctccccacggcggcgtcccctttcccgccctacacgtcctcgtcctcgtcgacgccgttgtccacgtcaacgccgtcctcctccaacctcgccgccgccaatgccaatgccaccacgacgagcacggccgcagccaccaccgccacgtccgtcaacccgaccgcggccgccggagccggcgacaccttccagctgacgcccgccgcgctcctccggatgcagcacgatgcgaccagcagcagcggcagctacctctccttccccagcgtcctcgccgccgcgtcgcagcccatgttcggcggcttcgcgcagggcggcggcggcggcgcgcggctgcacgacgcctcgccgtccccgtcgttctcggagttcctcggcggcggcatcagcctcaccgacggcggcggcttgatgtcctccgacgccctgcaccaccacctccccacaagaaacgacgcccaccaccacggcggcgacgagctgtccggcgtcgtcgcgtccggcagctgcaagctcaactacacctcccacgccggcgcaccatcgtcatcacaagccgccgccgccgacaagccgccggatggctccaccgccgccgcgcggcccgcccgaggcgagggcctcgacccatggatctgtacatccgagtag</cdnaseq>

Protein Sequence

<aaseq>MDSGNSGGSLQSSSGGDDEFDSRGGGGGGGVDSSPLSALLRPSS SSGFSLHGGSMYGFQELGSVGTSLQHQQGVQLQPWSAAQFAAGAPSSSSPRVAADAGV AGAHQQQQQQQQGDPSSEGAGAGAAVAAAPARGSRKRTRASRRAPTTVLTTDTSNFRA MVQEFTGIPSPPFVAGVGAPAASLRTRFDHLFPSPASALRSAAAGDPASSLPPYLLRP FAQKLPTAASPFPPYTSSSSSTPLSTSTPSSSNLAAANANATTTSTAAATTATSVNPT AAAGAGDTFQLTPAALLRMQHDATSSSGSYLSFPSVLAAASQPMFGGFAQGGGGGARL HDASPSPSFSEFLGGGISLTDGGGLMSSDALHHHLPTRNDAHHHGGDELSGVVASGSC KLNYTSHAGAPSSSQAAAADKPPDGSTAAARPARGEGLDPWICTSE</aaseq>

Gene Sequence

<dnaseqindica>1..1317#atggattctggtaatagtggagggagtctccagtcgtcgagcggcggcgacgacgagttcgattcgcggggaggcggtggtggtggtggggtggactcctcgccgctgtcggcgctgctccgcccctcctcgtcgtcggggttctcgctccacggcggatcgatgtacgggttccaggagctcggctcggtggggacgtcgttgcagcatcagcagggggtgcagctgcagccctggtcggcggcgcagttcgcggcgggggcgccgtcctcgtcgtcgccgcgtgtcgccgccgacgcgggcgtggcgggggcgcaccagcagcagcagcagcagcagcagggtgatccgtcgtcagagggggcgggggcgggggcggcggtggccgcggcgccggcgagggggtcgaggaagcggacgcgggcgtcgcggcgggcgcccacgacggtgctgaccaccgacacctccaacttccgcgccatggtgcaggagttcaccgggatcccttcgccgccgttcgtcgcgggcgtcggggcacccgccgcctcgctccgcacgcgcttcgaccacctcttcccctcgccggcgtccgccctccgctccgccgccgccggcgatccggcctcctcgctgccgccgtacctcctccgccccttcgcgcagaagctccccacggcggcgtcccctttcccgccctacacgtcctcgtcctcgtcgacgccgttgtccacgtcaacgccgtcctcctccaacctcgccgccgccaatgccaatgccaccacgacgagcacggccgcagccaccaccgccacgtccgtcaacccgaccgcggccgccggagccggcgacaccttccagctgacgcccgccgcgctcctccggatgcagcacgatgcgaccagcagcagcggcagctacctctccttccccagcgtcctcgccgccgcgtcgcagcccatgttcggcggcttcgcgcagggcggcggcggcggcgcgcggctgcacgacgcctcgccgtccccgtcgttctcggagttcctcggcggcggcatcagcctcaccgacggcggcggcttgatgtcctccgacgccctgcaccaccacctccccacaagaaacgacgcccaccaccacggcggcgacgagctgtccggcgtcgtcgcgtccggcagctgcaagctcaactacacctcccacgccggcgcaccatcgtcatcacaagccgccgccgccgacaagccgccggatggctccaccgccgccgcgcggcccgcccgaggcgagggcctcgacccatggatctgtacatccgagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0370500, RefSeq:Os09g0370500