Os12g0172400

From RiceWiki
Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0172400| Description = Protein of unknown function DUF1618 domain containing protein| Version = NM_001072812.1 GI:115487585 GeneID:4351636| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0172400

Description

Protein of unknown function DUF1618 domain containing protein

Version

NM_001072812.1 GI:115487585 GeneID:4351636

Length

2068 bp

Definition

Oryza sativa Japonica Group Os12g0172400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3667758..3669825

Sequence Coding Region

3667758..3668146,3668230..3669024,3669696..3669825

Expression

GEO Profiles:Os12g0172400

Genome Context

<gbrowseImage1> name=NC_008405:3667758..3669825 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3667758..3669825 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgcgccgcccggtcgttccccaactgggtgatgctagagcgcttcatcttccgcgtggacgacgacaaggagttccccgacgacgtcatcagggcgtcaggcctcacctctcaggagaatcccttccacgtcgccttccgcctctccaatcccccaggcatctctcgcatctacgtgcagttgccaggctttccaaattcaaggaatgtcttgccgttctccgtcgtggcgacccaccgtcacctcgtcctgttttccctcatctccaccgtcaaagatcaaattgacgtgcaggacttagtcatctatgacgcctctgccaccttgcagacgctccctccttgtaccgagctggacaatgtcctcctgagaatgatcgccgcatggccccaggtggtcctagctcaactctgtttgctgcggtcgcacatatcaaaggtagcgagcagcggttggcgcaccatccgtctgccgatccacgtccatggcaaccccgatgatgtgcatcagctctactcctggaagaccgacactgtgatccccttcgacaaccagctgtgctggattgactacatgcgaggcatcctcttttatgaccctgccgcgattgtcgtctctttccttccgttccctgtggatcatgagactcctcgtcgcaacaaggaatgcttctggttgtaccgtggtgtgtctgtccttgatgccagcggtgtgctcaaattcatcgacgtcgcccgcgatgatggacttggctttgagtctctcaggcgtgatgctggttttactgtcacctgctacagcctcgtgttgggagaacataagaagaagaagaagaaacacaggagaaccatggagtggagggaggactacaagatcacctccaatgagctctggtctatcaacagccttgactgcctcccacgcaccttactcatgttccctcaagtggacattgacaggccacatatagtgcacttccttgcccctgaattacggtatgtcatcaagaagatgtgggtcgtcgccattgacatgaacaccaagatcgtggagtcatcttctctgtatatcaatgggaaggaggaccttcaaactgaggacgctggcctgacccgtgcaaagtcgcgctttccgcagtccttcctcccatctgacttctccaagttcatcactttctcaagtacatcttcctgcccagctaccattttgctttcttctaaatatgctatggttcctggagaggattctgtcgtttctcgacattggttgaaggagctatttcatgttgtggtctacttttatgctgtgtga</cdnaseq>

Protein Sequence

<aaseq>MCAARSFPNWVMLERFIFRVDDDKEFPDDVIRASGLTSQENPFH VAFRLSNPPGISRIYVQLPGFPNSRNVLPFSVVATHRHLVLFSLISTVKDQIDVQDLV IYDASATLQTLPPCTELDNVLLRMIAAWPQVVLAQLCLLRSHISKVASSGWRTIRLPI HVHGNPDDVHQLYSWKTDTVIPFDNQLCWIDYMRGILFYDPAAIVVSFLPFPVDHETP RRNKECFWLYRGVSVLDASGVLKFIDVARDDGLGFESLRRDAGFTVTCYSLVLGEHKK KKKKHRRTMEWREDYKITSNELWSINSLDCLPRTLLMFPQVDIDRPHIVHFLAPELRY VIKKMWVVAIDMNTKIVESSSLYINGKEDLQTEDAGLTRAKSRFPQSFLPSDFSKFIT FSSTSSCPATILLSSKYAMVPGEDSVVSRHWLKELFHVVVYFYAV</aaseq>

Gene Sequence

<dnaseqindica>1..389#473..1267#1939..2068#atgtgcgccgcccggtcgttccccaactgggtgatgctagagcgcttcatcttccgcgtggacgacgacaaggagttccccgacgacgtcatcagggcgtcaggcctcacctctcaggagaatcccttccacgtcgccttccgcctctccaatcccccaggcatctctcgcatctacgtgcagttgccaggctttccaaattcaaggaatgtcttgccgttctccgtcgtggcgacccaccgtcacctcgtcctgttttccctcatctccaccgtcaaagatcaaattgacgtgcaggacttagtcatctatgacgcctctgccaccttgcagacgctccctccttgtaccgagctggacaatgtcctcctgagaatgatcgccgcatggtgatgctccgatccacgggcctcttgtacctaggcaaccaagatcagttcgaggtggtagagctgaatctttacctatccaggccccaggtggtcctagctcaactctgtttgctgcggtcgcacatatcaaaggtagcgagcagcggttggcgcaccatccgtctgccgatccacgtccatggcaaccccgatgatgtgcatcagctctactcctggaagaccgacactgtgatccccttcgacaaccagctgtgctggattgactacatgcgaggcatcctcttttatgaccctgccgcgattgtcgtctctttccttccgttccctgtggatcatgagactcctcgtcgcaacaaggaatgcttctggttgtaccgtggtgtgtctgtccttgatgccagcggtgtgctcaaattcatcgacgtcgcccgcgatgatggacttggctttgagtctctcaggcgtgatgctggttttactgtcacctgctacagcctcgtgttgggagaacataagaagaagaagaagaaacacaggagaaccatggagtggagggaggactacaagatcacctccaatgagctctggtctatcaacagccttgactgcctcccacgcaccttactcatgttccctcaagtggacattgacaggccacatatagtgcacttccttgcccctgaattacggtatgtcatcaagaagatgtgggtcgtcgccattgacatgaacaccaagatcgtggagtcatcttctctgtatatcaatgggaaggaggaccttcaaactgaggacgctggcctgacccgtgcaaagtcgcgctttccgcagtccttcctcccatctgacttctccaagttcatcactttctcaaggtatatatattgctagtttttatgtatccatatcctacttatatgcatgttgattgctgcgtacctgcaattgttagcctcctgtcagtagcctcttcctccaaacatttaaacataaatatttaaatatactccctccgtacctaaatatttgacgccattgactttttaaaacatgtttgagtgttcgtcttattcaaaaaatttaagtaattattaattttttcctatcatttgatttattgttaaatatacttttatttgtacatattagttttacatatttcacaaaagttttttgaataagatttatggttaaatatgtgctaaaaagtcaacggggtcaaatatttagggacggatggagtatattgttggaaacttttagcatttgtaagtgaagtatgcttatttcttaagtagtggctgtttttgccaattctttctaaaattaattatagcacaactggagtagtttacaaagcatctttgcatgctagccttatcttgctaatggacgcaagtttaattggaacaccatccatctaaatcatttgtgttggtggacatttcagatattgtatgcaaggaaattcacgatttatgtattgcaggacgaggaacaatatggaatgaatcacatctgtcaacttcatcgatcctacttatagtacatcttcctgcccagctaccattttgctttcttctaaatatgctatggttcctggagaggattctgtcgtttctcgacattggttgaaggagctatttcatgttgtggtctacttttatgctgtgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0172400, RefSeq:Os12g0172400