BGIOSGA036317

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Revision as of 08:19, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036317| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036317, complete gene.| tag = P0470H0...")
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Gene Name

BGIOSGA036317

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036317, complete gene.

LocusTag

P0470H09.37

Ensembl Transcript ID

BGIOSGA036317-TA

Ensembl Protein ID

BGIOSGA036317-PA

Length

4337

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:10117018..10121354

Sequence Coding Region

10121051..10121354,10119625..10119842,10119072..10119236,10118823..10118987,10118507..10118641
,10117564..10117661,10117018..10117210

Genome Context

<gbrowseImage1> name=IndicaChromosome12:10117018..10121354 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:10117018..10121354 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGACTACGGCGACGGCTGCGGCGGCGCCGGAGGTGAGGTACGGGATAGTCGGGGTGGGGATGATGGGGAGGGAGCACCTCCACAACCTCGCCCACCTCGCCGGCGAGGTCGGGCGGGCGGAGCCGTCGGTGCGGTTGCGCGTCACCTGCCTCGCCGACCCCCACCCGGAGTCGCTCCAACTCGGCCTCCAGCTCGCCGCCGACCTCGCCCTCCCCGCTCCCCAGGTGTATACACGCACGCCATGGCCATCATATTATCTGAATTCACCTTTCGCTTTGATGATGAACTGTAGGGCAATTGTGCCTGTTGTTGTACTGAATCCTAAACGACTAGAAGGTTTCAAGATCTTTTCAGGTCATGGGGAGCTGCTGGACAGCGGGCTTTGCGACGCTGTTGTCGTGTCATCACCAAACATGACCCACTACCAGATACTCATGGACATCATCAGTCACCCCAAACCACACCACATCCTTGTTGAGAAGCCCTTGTGTACTACAGTACAGGACTGTCAGAAGGTTGTAGAAGCGGCTAAACAGAGATCAGACATACTTGTGCAAGTTGGATTAGAATACAGGTATATGCCTCCGGTTGCTAAGCTTATAGATACTGTTAAAAGTGGCACCTTGGGGCAAGTCAGAATGGTGGCAATCCGTGAACACCGGTTTCCTTTCCTTGTTAAGGTTAACAATTGGAATAGGTTCAATTGCAACAGTGGAGGAACTCTTGTTGAGAAGTGCTGCCATTTTTTTGATTTGATGAGATTGTTTGCAGCTGCAAACCCTGTTCGTGTGATGGCTTCTGGAGCCATTGATGTCAACCACAAGGATGAAATTTATGATGGGAAGGTTCCAGATATTATAGACAATGCATATGTAATAGTAGAATTTGATAATGGCTCTCGTGGCATGCTTGACCTCTGCATGTTTGCTGAAGGTAGTAGGAATGAGCAGGAAATTTCTGTAGTTGGTGACATTGGGAAGGGCGAGGCTTTTGTTCCAGAGAGCATTGTTAGGGTTGGAAAGAGAACAGGAGGTAGAGATGGAGTTGTAACGATAATGGCTGAAGATGAACGGATCAAATATCAAGGTCTTCATCATGGATCTAGCTACCTGGAGCACCTCAATTTCCTGTCTGCCATCAGGCTTCAAGGTGCATCCGGCCCATCGGTCGATTTAACTGATGGCCTATTATCTGTTGCCATCGGCGTGGCTGGGCAGTTGTCCATTGAGAAGGGGCGTTTTGTCACAATTGAAGAGGTCTTGGCTGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MATTTATAAAAPEVRYGIVGVGMMGREHLHNLAHLAGEVGRAEPSVRLRVTCLADPHPESLQLGLQLAADLALPAPQVYTRTPWPSYYLNSPFALMMNCRAIVPVVVLNPKRLEGFKIFSGHGELLDSGLCDAVVVSSPNMTHYQILMDIISHPKPHHILVEKPLCTTVQDCQKVVEAAKQRSDILVQVGLEYRYMPPVAKLIDTVKSGTLGQVRMVAIREHRFPFLVKVNNWNRFNCNSGGTLVEKCCHFFDLMRLFAAANPVRVMASGAIDVNHKDEIYDGKVPDIIDNAYVIVEFDNGSRGMLDLCMFAEGSRNEQEISVVGDIGKGEAFVPESIVRVGKRTGGRDGVVTIMAEDERIKYQGLHHGSSYLEHLNFLSAIRLQGASGPSVDLTDGLLSVAIGVAGQLSIEKGRFVTIEEVLAG</aaseq>

Gene Sequence

<dnaseqindica>1..304#1513..1730#2119..2283#2368..2532#2714..2848#3694..3791#4145..4337#ATGGCGACGACTACGGCGACGGCTGCGGCGGCGCCGGAGGTGAGGTACGGGATAGTCGGGGTGGGGATGATGGGGAGGGAGCACCTCCACAACCTCGCCCACCTCGCCGGCGAGGTCGGGCGGGCGGAGCCGTCGGTGCGGTTGCGCGTCACCTGCCTCGCCGACCCCCACCCGGAGTCGCTCCAACTCGGCCTCCAGCTCGCCGCCGACCTCGCCCTCCCCGCTCCCCAGGTGTATACACGCACGCCATGGCCATCATATTATCTGAATTCACCTTTCGCTTTGATGATGAACTGTAGGGCAAGTAGGAGTAGGACCCTTTGCTGCTTTTATTTTATTGAAAGCATGGGTTTCAGAGTGCAGAAGTTTCAGAGTTGTTTTGCAAATGCAAACAAAAGGAATTAGTAACAGCAACATTGAGCTAAAAGCAGGAGAAACACCACTAAAGACAACACCAAAATGGCAATCTTGTTCCCAGAGGCCATACATCAAAACAACATAGTTGTTGAGGTCTGGCTAGATGATGTACAGTGATCTTGTTTGTTGTATAACATGTAGCAAGCCTCACTTGAACTTTTACAAGTTTTGTTGTTCTGCAAATGCAAACCAAAAGGAAGGAATAGGACCTAAAGAGGAGAAACACTACTAATAAAGATAAAAAAAAAGGTTGTTGAGATTTGAGATGTGGCTGGATGTTGTATGGTAATATTGTTTGTTGTAGAACATGTAGCAACTAGCAGGCCTCTATTGAACTTAGAAGTTTTGTTGGTGTTCTTTTGCTGGTCCACCAGAAAATGTTTCATAAGTAGCTGCATATCAAATATTGTCCTTTGTCAACCAGGATGGCTCTGTAGAGTTTGCATCCAAATCTTTAGGCTACTGCTGAAATCCTAAACCTTTGCTCTGTCCTTCACCTGCAGTAGTACACTCCAGGACTGCAAAGAGAATAGAAACTTTCTTCAGAAGGATTAATTCAGTTTTCTTAGGAAACCTTTTCTCAGTTGCCATTTTGTTCTGATTTTGCTGATTAGCCCAGGGCCAAAGCCCCAAAACAGAGAACTGTATAGCCAGGGCCACATCCCAGATGCAACCAGGAAAAAAAGGAAGTCTTCTCTATTGTTGAGAGATCTATCCCAATAAAAAGTATCTCTAAGATAGGTCCAACGAAATTTAGCCAGAGGAAAACGTTGTGCAGTGTGCAGATGGAAGTTTATAATGGAAAAGCTTCCATAGAAAGGTTTTAATTTTAAGTGGTATTACTTTTTTCACTACTCTTTATTCTATCATTTTGTACAGTGATTTTATTAAAACTGTGAATACTACTGCCTTGATTACTGCTTAGTAGTGGCTGATAATTGTGATTCTAGTTTCTGAAATTAATTCCCTTTTTTTCATTGATTTCATCACAATTAGACTTTAGTGTGCCATGTGTGTTAGTTCAATTCAGATTTTTTGTCAAAACTATTGACAGTATGGATGATATTAGATTGCCACAATTTGTGTGTTCTATAGTTGTGCCTGTTGTTGTACTGAATCCTAAACGACTAGAAGGTTTCAAGATCTTTTCAGGTCATGGGGAGCTGCTGGACAGCGGGCTTTGCGACGCTGTTGTCGTGTCATCACCAAACATGACCCACTACCAGATACTCATGGACATCATCAGTCACCCCAAACCACACCACATCCTTGTTGAGAAGCCCTTGTGTACTACAGTACAGGACTGTCAGAAGGTGAGCTCAAATTTTGGAGGGTCAGAGCTGTGTGATGTGATTTTGATGCCTGCAGTGCTGCAAAATTTTACGTTCATGAATACTTTTAAGCTTTGCTGTTCTCGTTGTATGTGGGAAGTTTGTTGAACATTTAATTGCATTTGTAGTAGAAGCGAAAAGAAAGGAGAGCCATGCTAATCTACTGAGAAATTAAAGAGAAGACATGCTAGCAAGGTTGTTGAGGAAAAACAGATATCAATGTATTTGACCTTGAATCTACATAGATCTATCTTGATTGTTTGTGTCTCTGTTCAGTTGTTCTCTGATGAACACCTGAAAATTTTAGTTCTCTCGATCTGTACAAACCTCTTTCATGTGGATTTCAGAATCTGTCCATCTTTCCATACAGGTTGTAGAAGCGGCTAAACAGAGATCAGACATACTTGTGCAAGTTGGATTAGAATACAGGTATATGCCTCCGGTTGCTAAGCTTATAGATACTGTTAAAAGTGGCACCTTGGGGCAAGTCAGAATGGTGGCAATCCGTGAACACCGGTTTCCTTTCCTTGTTAAGGTACAAGGACCCAAGACTATGATACTAGTTGTAATTATTCTTTTCAAATTTCCTGTAAGGCTGTAACTGTTACAACCCTGGCAGGTTAACAATTGGAATAGGTTCAATTGCAACAGTGGAGGAACTCTTGTTGAGAAGTGCTGCCATTTTTTTGATTTGATGAGATTGTTTGCAGCTGCAAACCCTGTTCGTGTGATGGCTTCTGGAGCCATTGATGTCAACCACAAGGATGAAATTTATGATGGGAAGGTCAGGTTAATTGACTACAAGATCGCTGATTTATAAGCTGGATGGCATTTTCACTCATGTGATTATTTATAAGCTTATAAAGGCTATATTTATAAGCTGCAGCGCATTTTTTGTGCTTATCGGGTTATGGTGGTCTCAGTTTAAACAGCAGTCCCTGATTTTAACTTCTTTCTCAATGCAGGTTCCAGATATTATAGACAATGCATATGTAATAGTAGAATTTGATAATGGCTCTCGTGGCATGCTTGACCTCTGCATGTTTGCTGAAGGTAGTAGGAATGAGCAGGAAATTTCTGTAGTTGGTGACATTGGGAAGGTACAACTAAGACGATGCTTTTCATATCTTGATTTCTTCGTAGTACAATTGCGTAGTAATACGCAGATATGCCACTTTAGTGAATTTTTGTTATGTAGCTGATGATGTTTCTAGGGTAATTTAGATCTTCCCCAACAGTAAGGGCAATTAAGAGTAAAAATGACACTATGCTGCAAAATTGCATAAAATATCTTGTCATGCTGCTAGAGCTTAGAGGCACATCACCACACCAGATGTGGTAGTCGTAACCTATCAAATATGGGTCCTGTTATTACATCTTTTACCTTTTTTAGATGAATATTGCACACTCTTGGGGAATGTTGTTCAGACAGAAGTTATCTATTCCAAAAGCATTGGCTCACTGGTAAATTATATTTGAATGATTAAGCATCGGCAATAACACATGCATCTCTACACCATAGATCCAAAATAAAAGGTTGGTCTATTGTGCTCAAGTCTATGAGCAAGAAGTTTTTTTTGACGCTGACTATGAGCAAGAAGTGATAAAGATATGGATTCTAATTTCTAAATGTCACGACCATAGTATAAAATGCTGGGACCATATAGATAAGGGGGAGGGGGTGTCAGAAGATGTAGTTGAAGCTGTAAAATTTCATGATGATCTGGTTCTGAGCTTGTTGCCAAAGATTTTAGGCAAGTTGCTTCAGATGCCATTAGGGCATTAGGTAAGTTTGAGTCTTTTTATTGTTGCAATGGAGCTAAGAAATAGAAAGGAGTCCCTTTTAGAATTTATTTGGCATAGCTAATCTTTATTATACATGCTATATTAAGTTAACTGTCAGAGTACGGAATTTTATTATGTATAATGATGGAAATTTAAACAGGGCGAGGCTTTTGTTCCAGAGAGCATTGTTAGGGTTGGAAAGAGAACAGGAGGTAGAGATGGAGTTGTAACGATAATGGCTGAAGATGAACGGATCAAGTATGTTCCGCTTTACCACTTTGTAACAAAATTTTGTTCTTCTGAACAGTTGTCGTTGGGCAACAGGTTATCCATAAAACACACTGACATTTTCCTTCAGATTGGAAAACACCCACTGTAAAAGTGTCCCAAAACTAAAAGCGGTTTTAATATCCATGGACGGACATCACATTAAAAATTTTTCTTTTAAAGGATCTCCTTTATAATATTCAATATCTGCTTATCCAACTACAGGATTAGTTAACAGTCCAGGAAAATTAATCCCTTCCAAGAAGGGAAGTAATGCTCAGAGGTTACTTTGGTCTAGGTAGGTAAGAAGTTTTATGTATCTCCACTAACTGTAAATTTTTCAGATATCAAGGTCTTCATCATGGATCTAGCTACCTGGAGCACCTCAATTTCCTGTCTGCCATCAGGCTTCAAGGTGCATCCGGCCCATCGGTCGATTTAACTGATGGCCTATTATCTGTTGCCATCGGCGTGGCTGGGCAGTTGTCCATTGAGAAGGGGCGTTTTGTCACAATTGAAGAGGTCTTGGCTGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036317