Os12g0173400

From RiceWiki
Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0173400| Description = Conserved hypothetical protein| Version = NM_001072815.1 GI:115487591 GeneID:4351639| Length = 3151 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0173400

Description

Conserved hypothetical protein

Version

NM_001072815.1 GI:115487591 GeneID:4351639

Length

3151 bp

Definition

Oryza sativa Japonica Group Os12g0173400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3722744..3725894

Sequence Coding Region

3722937..3723559,3724079..3724306,3725556..3725805

Expression

GEO Profiles:Os12g0173400

Genome Context

<gbrowseImage1> name=NC_008405:3722744..3725894 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3722744..3725894 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtggattcgggtcggaacgggaccggccacggccagatcgctggccccgacgaggagatccccgccggcggagacgcgaagaggtcgcgcgaggagggcggccgcaacaccaccaccacctgccaagaagacgaggacgaggacaacgactactacaacgacgactccaatttcctcgactcctaccgtaccacctgggccaccaactacggcaaaaacgacggatcctcctttgaggacgagactgcaatccggcccatgcagcacactgatggacctgtgctgccgatatcctcgtggccaatggacgtgctacaaatattttcagtcaaggtgacagaggtcatggggaaccttgagtggccactgcgtgtctacggcatcgttgctgtccgtgactcgctggatcacaagaggaacgtcctcttccgccgcgacagggacgactgccagaccctcacctcgccacaggattcatctctgacgctcactggccctagccgtgccgtcgtgctgatcaaccctgtcatgttcgaggttgacctcaaggtgatcacccacaacaatagtggcttgccgttgtctgaatctgaagaggacgataaggtgctaagctacaacgccttcttctacgacggcgtagctcacatgaacaacactggcttcgcccggagatccgtcgagtcgacggagcactccacaatggagttcgtcttcgcacacctgatattcgccgtggaggccaccatcgcagttcgtgtcatcgaaggctcaaccgatttcagggcccgtctcaccgctcgcaccgctggcatcgatgaagacgtggtgctgctcgactccggtgacggcaaggtggcggtggtcaatgacgatgacgacagtggcccactcgtcgtgctgcagcggcgcgtcgtggtggtggaggagaagggaagcctgatccttggtgtggaggctgcagagattggcagcgaagagattgtgacgagacaggtggacatcaggcctaggcatgcgttgagaagcaggtgtggattcaatcttgggttctgcaggatgtcggtcatgatcgcctggtcagtgctaccttaa</cdnaseq>

Protein Sequence

<aaseq>MEVDSGRNGTGHGQIAGPDEEIPAGGDAKRSREEGGRNTTTTCQ EDEDEDNDYYNDDSNFLDSYRTTWATNYGKNDGSSFEDETAIRPMQHTDGPVLPISSW PMDVLQIFSVKVTEVMGNLEWPLRVYGIVAVRDSLDHKRNVLFRRDRDDCQTLTSPQD SSLTLTGPSRAVVLINPVMFEVDLKVITHNNSGLPLSESEEDDKVLSYNAFFYDGVAH MNNTGFARRSVESTEHSTMEFVFAHLIFAVEATIAVRVIEGSTDFRARLTARTAGIDE DVVLLDSGDGKVAVVNDDDDSGPLVVLQRRVVVVEEKGSLILGVEAAEIGSEEIVTRQ VDIRPRHALRSRCGFNLGFCRMSVMIAWSVLP</aaseq>

Gene Sequence

<dnaseqindica>2336..2958#1589..1816#90..339#aaaagccctagctttcttatccggggaaagaaaaagaaaaaagaaaaaaccctagcgatcgatcttggcggcgaggcgagcgacaggggatggaggtggattcgggtcggaacgggaccggccacggccagatcgctggccccgacgaggagatccccgccggcggagacgcgaagaggtcgcgcgaggagggcggccgcaacaccaccaccacctgccaagaagacgaggacgaggacaacgactactacaacgacgactccaatttcctcgactcctaccgtaccacctgggccaccaactacggcaaaaacgacggatcctcctttgaggacgagagtgagtaacccccacttcttcttcttcattgcgcaccaatcacatctcatcatcttaatcttaaggacaattcattgcgcaccaatcacatctcatcatcttaatcttaaggacaatcttaaggacaagaagcccaaacaatttctttacaggcgtcatcttaatcttaaggacaagatttcgatatatggccatcaatttgctcatgtgcaaactagttttttttcccttcttttttgggcatactagtaagataaattttaaagtaaattgtactttggtccaccttttattacctaagtttcaatttggaccacccttaaacctatctttttaatttggaccgggtaaatttaccattgttgcggtttggactaccataaacaactttttctcatcatgtctaacttccctttcggcaaacatatgagctatacatagaggagttcggccgtgtactaaagctgatgtgtttaaggtcgctgattgtactgaaaaaaaaatcgttcatggtggtccaaatcgcaataatggcaaagtcatctggtccaaagtgaaaatatatgtttaagggtggttcaaagtgaaacttaggtaataaaatgtggcccaaagcgtaattcactctaaattttattaggcaaatggctccgttcgtttccacttaaaaaagtggattaagttttagatattcgtgacacgcttttcaaactgctaaacggtgcgtttcgtgcgaaaactttctatataaaagttgttctaaaatatcagattaatacatttttcaagtttgaaataattaaaactcaattaatcacacgttattaccacctcgttttgcgtgaaaaatttaatattcatcttcaggagattcaaacaccaccattgaccactctgctgtaagttaatctgagcgtacacaaacagtcctggtctgcactggatgtgtcaggaggaatgaggtcgcacgacagaatttcactatgaaattccacatggttcgagaaggtgctagacgcaaggtggtccatagggctaaactcttataacaaacctgtctagcgctttccaagcaattaacaagccttcttttttccaaaaagaaagtagaattatatcaatataaccagacaggacagctgcctagtgcacattcaaacacaaaatcacagtggacttttagaacactgaaattccattccatgtattcaataatgattcaactagtgctatatctatatgcctacagctgcaatccggcccatgcagcacactgatggacctgtgctgccgatatcctcgtggccaatggacgtgctacaaatattttcagtcaaggtgacagaggtcatggggaaccttgagtggccactgcgtgtctacggcatcgttgctgtccgtgactcgctggatcacaagaggaacgtcctcttccgccgcgacagggacgactgccagaccctcacctcgccacaggcaagcatcacattcaacgtatttatctttcccatgatttatactagtactagcttactcctctctttgatcataaatataagcacttttagaacaagccaaacctttttagttttgactgccaaattgttaaagagaacataatgatggatcacgtaagaaagatgttgctaggtttatcgttaaacaaattatcataagactctttttatttggaataatttatttttatagatacaggtcaaagtagcacattggaaaccgtgtctaagtccaaagtatttatatttgtaaacgcatggagtatttagttttatcagtctggcatcctttttaaaatggaggtaatagttagtatggttttatcggtctgaaattcggggtttgcatcctggatcacagttgttgcttatattttttgaactgaagatcaatgtgtaagatcagaatccagacatgatctgtatattgcttactgtgcatatatatttatgtgtgtttatgcatgtatatatacaggattcatctctgacgctcactggccctagccgtgccgtcgtgctgatcaaccctgtcatgttcgaggttgacctcaaggtgatcacccacaacaatagtggcttgccgttgtctgaatctgaagaggacgataaggtgctaagctacaacgccttcttctacgacggcgtagctcacatgaacaacactggcttcgcccggagatccgtcgagtcgacggagcactccacaatggagttcgtcttcgcacacctgatattcgccgtggaggccaccatcgcagttcgtgtcatcgaaggctcaaccgatttcagggcccgtctcaccgctcgcaccgctggcatcgatgaagacgtggtgctgctcgactccggtgacggcaaggtggcggtggtcaatgacgatgacgacagtggcccactcgtcgtgctgcagcggcgcgtcgtggtggtggaggagaagggaagcctgatccttggtgtggaggctgcagagattggcagcgaagagattgtgacgagacaggtggacatcaggcctaggcatgcgttgagaagcaggtgtggattcaatcttgggttctgcaggatgtcggtcatgatcgcctggtcagtgctaccttaattcatgtctcatgtgcattcaatgcttgactaatccatggctaactactacctttatgaggatgacacttagtactaattttaagcctctgtcaaattgcaagtactgctttgaactaattaagctagatgtgatgtgatgtgatggtgccgatggtttcttttgtacttgtgaagttgtgaccagccggttg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0173400, RefSeq:Os12g0173400