BGIOSGA036372

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Revision as of 08:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036372| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036372, complete gene.| tag = OsI_379...")
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Gene Name

BGIOSGA036372

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036372, complete gene.

LocusTag

OsI_37986

Ensembl Transcript ID

BGIOSGA036372-TA

Ensembl Protein ID

BGIOSGA036372-PA

Length

8593

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:8334216..8342808

Sequence Coding Region

8342521..8342808,8341395..8341487),complement(8340887..8341031,8339786..8339984),complement(8338827..8338905
,8338153..8338425),complement(8337862..8337923,8336178..8336264),complement(8335573..8335676
,8334216..8334298

Genome Context

<gbrowseImage1> name=IndicaChromosome12:8334216..8342808 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:8334216..8342808 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGCGCTTCTTCCAGCCCGTTCCCAAGGATGGCTCCCCGGCGAAGAAGAGGCCCGCCGCCGCCGCCGCCGCCTCCGCCTCCGACTCCGACTCCCTCGGCGGCGACGCCCCCGCCGCGGCCGCCTGCGCCGTCGGGGAGGGGGATTCTCCTCCCGCTCCCCGCGAGGAGGAACCGCGGAGGTTCGTGACGTGGAACGCCAACAGCCTGCTCCTCCGGATGAAGAGCGACTGGCCGGCCTTCTGCCAGTTCGTCTCCCGCGTCGACCCCGACGTCATCTGCGTCCAGGAAGTGCGGATGCCAGCAGCTGGTTCCAAAGGGGCACCAAAAAATCCTGGTCAACTGAAAGATGACACAAGCTCATCACGAGATGAAAAGCAGGTAGTGCTGCGTGCTTTGTCGAGTCCACCTTTTAAAGACTATCGTGTCTGGTGGTCTCTTTCAGACTCCAAATATGCAGGCACAGCTATGATTATAAAGAAGAAGTTTGAACCAAAGAAAGTGTCATTCAACTTGGATAGAACATCTTCCAAGCATGAACCAGATGGGCGTGTTATTATTGCAGAATTCGAATCGTTCCTCTTGCTGAACACTTATGCTCCAAACAATGGATGGAAAGAAGAGGAAAATTCATTTCAAAGAAGACGGAAATGGGATAAAAGAATGTTGGAGTTTGTTCAACAGGTAGACAAACCCTTAATCTGGTGTGGAGACTTGAATGTCAGTCATGAAGAAATCGATGTTAGCCATCCTGATTTTTTTAGCAGTGCTAAACTCAATGGATACATCCCTCCAAATAAAGAGGGGGTCAGAATGGGAATACTCGAGCAGCGGGTTAAGATGACCAGTGGCATTCAATTAAGTCAAGAAAAACCCCTGAACACGCTGCGCGACCAGGCATGCTCAACCTCACGAGAGGAGCACACGTCTGCCAGCGCCAGCAAGTGGGGCTGGAGCCACTTCAACCAATTCAATATTGGGAAGGGCTGGGAATATGCAAATTTCAGTTACAAGAACATCAATGCATGTGAAGGAATCCGTTTCTGTCCTCTCTATCAGTGCCACAATATTATAGTAGATTGTGGACAGCCAGGATTCACCCTGTCAGAGAGGCGGCGCTTCGGCAATATATTGTCCCAAGGAAAGCTGGTAGATGCTTACAGATATCTGCACAAAGAGAAGGACATGGATTGTGGCTTTTCTTGGTCTGGACATCCAATTGGCAAGTACCGAGGGAAGAGAATGCGAATTGACTATTTCCTTGTTTCAGAAAAACTGAAGGACCAAATAGTTTCATGTGACATTCATGGTCGTGGAATAGAGCTAGAAGGATTTTATGGAAGTGATCACTGCCCCGTTTCACTTGAGCTCTCGGAAGAAGTAGAAGCACCAAAACCCAAGTCCTCCAACTAA</cdnaseq>

Protein Sequence

<aaseq>MKRFFQPVPKDGSPAKKRPAAAAAASASDSDSLGGDAPAAAACAVGEGDSPPAPREEEPRRFVTWNANSLLLRMKSDWPAFCQFVSRVDPDVICVQEVRMPAAGSKGAPKNPGQLKDDTSSSRDEKQVVLRALSSPPFKDYRVWWSLSDSKYAGTAMIIKKKFEPKKVSFNLDRTSSKHEPDGRVIIAEFESFLLLNTYAPNNGWKEEENSFQRRRKWDKRMLEFVQQVDKPLIWCGDLNVSHEEIDVSHPDFFSSAKLNGYIPPNKEGVRMGILEQRVKMTSGIQLSQEKPLNTLRDQACSTSREEHTSASASKWGWSHFNQFNIGKGWEYANFSYKNINACEGIRFCPLYQCHNIIVDCGQPGFTLSERRRFGNILSQGKLVDAYRYLHKEKDMDCGFSWSGHPIGKYRGKRMRIDYFLVSEKLKDQIVSCDIHGRGIELEGFYGSDHCPVSLELSEEVEAPKPKSSN</aaseq>

Gene Sequence

<dnaseqindica>1..288#1322..1414#1778..1922#2825..3023#3904..3982#4384..4656#4886..4947#6545..6631#7133..7236#8511..8593#ATGAAGCGCTTCTTCCAGCCCGTTCCCAAGGATGGCTCCCCGGCGAAGAAGAGGCCCGCCGCCGCCGCCGCCGCCTCCGCCTCCGACTCCGACTCCCTCGGCGGCGACGCCCCCGCCGCGGCCGCCTGCGCCGTCGGGGAGGGGGATTCTCCTCCCGCTCCCCGCGAGGAGGAACCGCGGAGGTTCGTGACGTGGAACGCCAACAGCCTGCTCCTCCGGATGAAGAGCGACTGGCCGGCCTTCTGCCAGTTCGTCTCCCGCGTCGACCCCGACGTCATCTGCGTCCAGGTGAGCGGCGCGGGGGCGGGGGTTTTCGGTTTTGGGCGCGATCTTTTGCCTCTTCTTTTTATCCGGCTTTTGCTCCCTCTAGGGTTTAATCTGCAGTGCTGTGCGGATGTGGGGATATGGGAGTGGGTTTTAGGCGATTGTGCAGCAATGTGGCATATGCCAGATTTGCGGTCGCTCACGGGCGTTTCGTCGAGCACGTTGGGAGCGTACGTTTTCGTTATTCACCCATGGGAGATTAAACAAGGGAGGTGCGATCTTAATAGAGATTGAGGTTTTTCCTCCCAGGGTTCTGTCCTTCCAGATGTTCACAGAGCTTGCATTGCGTTGTATTCACATGCAATTTGAAGATAGTTGTGTCATTGCTTGCGAGTGGAGTTGCTAGGAACTCGTTGTCAGTGTTCATAGCCCAGTTTTTTTTTTTTTTTTGTTAGCCACTTGTGATGCTAGCACAAGTACTCCATCTAGGCAAGGACTGTGACAAACTGTAGACCATATGGTATGTGAAGTGTTCTCTTCAAGTTAAATCTTCAATTCATGATATGGGAAAACTCGTGATATATTGAATGATTGAGCTTTTCTTTGGTACCACTATGCCCACTGTATAAGGTGTTAACCACAACAAAATTGAGGTTCACATACTATTCTACTGTTTCATGGGAACCAGTTCGGCAGCTCCTCTTCTTTAATCACACTGCCTCTTCTTTAGTCACATTGCAACTTATTTCTCTTATGCTTGTGATCCCAATATATCCTATAGTTTTATTGGATTTATATTAGGCACATCCTTTTGGAATCTACCTCAGGGGCTTGACGCTCAAGTACATAGGACATGAGGACGTCTTTTTGTCTTTCCAAACCTCATAATGTTTCATTCTTTGTCCTTATAATGTTCAGTTGCCTGCTTATTCTTTTGTATCCAGCTGGTCACAACTATTTTGCTTTTGTCTGATTTTTTTATCAGTACTTACAACTTCATTTTAAGTATACATGTCATAAATGTCTTACTAGGATAGTATCTAAACTTCTTTGTTAGGAAGTGCGGATGCCAGCAGCTGGTTCCAAAGGGGCACCAAAAAATCCTGGTCAACTGAAAGATGACACAAGCTCATCACGAGATGAAAAGCAGGTAATACAAGCATTAAAAGATTAATGAAATTTTCTGTGACTTTTATGCAGAAGTTAATATTAGATTTGTCGTGCTTTTCATAATACTAGGCAGATCAAGATCAAATTAAGAATTCTAAACTTGATTCGTATCTTCATGCGATGCTATCTTTTCCAAGATTGACCCCTGTAAAACTAGAAGATTTGATATATGTGTAATGAATGTAGTACACTTCGCAAGCAACCAAGTTTCTATGTATACTGACTGATATTTTCAAGAATGGCAAGCTACAGTCTTTTTTTTGGTCCCTTCATGACTGTTTAGTATATTGCATTTGTTGTGCTCCAAGAAATTGTTCTAAGATCACATCTCGATGCCATGCAGGTAGTGCTGCGTGCTTTGTCGAGTCCACCTTTTAAAGACTATCGTGTCTGGTGGTCTCTTTCAGACTCCAAATATGCAGGCACAGCTATGATTATAAAGAAGAAGTTTGAACCAAAGAAAGTGTCATTCAACTTGGATAGAACATGTATGTTCAGAGTTGCATGCATGACTTCATATTTTCCTTTCATAGGCAATCTCCCGTTATCGGTGTGTTTTGTAGTGTCCATGTGCTTTGCTCTGGTGTGAATAACTCAATACAAGATCTACTTTAATATGCACACCATGGTGACCATATCAGTCTCATTCTAACGTTAGTGTGTCTCTCTTCATCTACCCTACAAATCATACGGCACATAAGATTTCACCAACAAGCATAGATGGAAACGATTTCTCTTGACTAATATAGAGTTGCCCAAGATGATGAATTATTTACTTACCGTGGTGGCTTTTATTCCTGATTAGCTTAAGTGTTGTGACGCTTGAGAATGTTTTTCTTTTGTTGATAACCACATCAGCTGCTAGATTGTTCTAGAACTTCTGAGTTGTTCTTCCTGATATGTTGGATATTTGTGTACATACTCTCAGTATAATTTATATTATTATGTTCCTATATGCTCCCTCCGCTTCATATTATAAGTCGCTTTGATTTTTTTCCTAGTCAAACTTCTTTATGTTTGACCATGTTTATAGAAAAATTTAGCAACATCTACAACATGAAATTAGTTTCATCAAATATTACATTGAATATATTTTGATAATATGTTTGTTTTGTGTTGAAAATATTGCTATATTTTTTTATAAAGTTGGTTAAACTTAAAAATGTTTGACTAGAAAATAAGTCAAAAATGAAGGAGGTAGTATTGTTTTAGTATGGCTGCTCCCAACTACTGTTCAGGGAAGAAAATGCACATCAAAACTTTAATGAAAAAGAAAGTTCCAGGTCAACAAACTTGTTGCACTGCAACTTTGAATTAACATTTGGTTTCATCATTACTTTCTCGCATATTGCTACTCTTTCTTAGGAATCCACTTTTGTATTGTTTTCAGCTTCCAAGCATGAACCAGATGGGCGTGTTATTATTGCAGAATTCGAATCGTTCCTCTTGCTGAACACTTATGCTCCAAACAATGGATGGAAAGAAGAGGAAAATTCATTTCAAAGAAGACGGAAATGGGATAAAAGAATGTTGGAGTTTGTTCAACAGGTAGACAAACCCTTAATCTGGTGTGGAGACTTGAATGTCAGGTAATTAATAATATTATTTATAACAGGTAGTACTAGTTACTGATTATCTTGTTTTCCTTGGACATATAGCTACATCTTCATACTATTTTTTAGATTTGATTCAGGCATACTGTAACAGAAAACCGATACATGACAAAATCTTTACACTTTTGACAAAAAAGCTAGTAGGCAACAGAACCGATAACAGTTTTTCTTTTCTTTTCTGTCAAGGCTGATTTGAGCATATTATATCCATAAAATACATATAATGAGCTGTGATATGTATTTTTGTATTCTGAAGCTTGAATCAGTGCAGGACGAATAATTCATATTATATTCTTCTTTTATTTACAAATTGCAATTATGTTACCCTGCAGTCCTGCACTCCTGTCTGCTATCATGATTTCAAGATTAGTTGAACAAGAGCAAACTTAGTGGCATGGAATATATTTTTATATTTTCCAATGCAACCACAGGATAGTCCTGACATGTTGTGATTTCAGTGCAACATGTTAGAAATTCCAATGCAACCACAGGAAATATAATTATTTTATTGAAGTCTAGTATATTTAGCTCACATCATCTATAAAATAGTTAAAATGTCTCGTAAAATCCACTGGTCCGACAATGTGTGAAAACTATGGATTTACTTTTCATTAGGTTTACCAAAATTCCATGTTTAGGAGATGGACTTCAGGTAATTGTTGATATAGAATTTTTTTGGAACTGGTCATGTACTGAAATTTCCATTAGATCTCAAAGTGAGTAAGCTGTCAAATTTTATATGGACTTGCTAAGGAACTCATATTTGCTACACCATGAATAGTAATAATCCACTACTTGACACCTTCCATAAACCAGCCTTAGCTCTAATACTTTGCTTGTATTTGAAATATTTCAGTCATGAAGAAATCGATGTTAGCCATCCTGATTTTTTTAGCAGTGCTAAACTCAATGGATACATCCCTCCAAATAAAGAGGTAACATTACTCTACTGATTCAAGTCTTCTATTTACAAGTGACTAGGAGTGATTTATTACTTTTCATGGCTTTTTACAACTCAGGAACTGTATGTAGTCACCACATTGAAATGATCCTTAAACAGTTTGTGCTTTTCATTTCTAGTTGCATGTTAGGGTTGTTCCTTAATGTAATTGTCCCATCTCGTAAACTGTGCATTTAGTTGACTAAAAAAGATAGTGTCAGCCTGCGTTAGCTGTTATATCCTATTAGCACATCCCTACTATTCCTAAGAACATTGGGTGCACTCCCATTATTGAAAACCTGTAAATCGTTCTTTTTCTTTTCTAGCACTTCATTCTCCAACTCAGAGGCAGACTTTCTTTTATTAGTGGTTGTTTTGGTTCTACTAGGACTTCAGGGGGTCAGAATGGGAATACTCGAGCAGCGGGTTAAGATGACCAGTGGCATTCAATTAAGTCAAGAAAAACCCCTGAACACGCTGCGCGACCAGGCATGCTCAACCTCACGAGAGGAGCACACGTCTGCCAGCGCCAGCAAGTGGGGCTGGAGCCACTTCAACCAATTCAATATTGGGAAGGGCTGGGAATATGCAAATTTCAGTTACAAGAACATCAATGCATGTGAAGGAATCCGTTTCTGTCCTCTCTATCAGTGCCACAATATTATAGTAGTATGTTTTACTTGAATCATCACTGTTCTAAAAAGGTCGCTGCCTAGCCTACCTAGGCAACCATTAGAATACTGATATGCCTAGGCTCTTGAGAATGTGATATATATTTAAATGTGCCTTTCACGTGCTATTGTACCAGCTGGCATACTGCCTGTTACAAAATAGAAGTCCTATTGGATCACTATTGAGCCTTTTGATGCAATTAAATCTCTTGCATCCTACTCTGCAGGATTGTGGACAGCCAGGATTCACCCTGTCAGAGAGGCGGCGCTTCGGCAATATATTGTCCCAGTACGTGAAAGCTGATACATTTCTACATTGGCAACTTTTCTTATACTATCTTTTGAAACTTGATGTCAAAAACATATTAGCACTACATGAATTAATTTCATTTTATAACGTTTTAGACCATAAAAGATGATATGTTCTGATCCAACCCATCTTGTTAAAATGGATTTAAATCTGTAATGTAGTTTACAGTGCACTGGCAACCATTATGGATTTGAGTCAAAAATATATAATATATTGGCTACTAGCTAGTAGTCATCACAGATATGGTTCATGCTCTCGTTGAATATGTCTCACACTCACCTTGAGCTAACTTTAGAGAATCTTCAGTGATAGTTTTATTCACATCCTCATCCTACCTAAGCCATCCCTTAAGATCTGGCTATGAGAGAGGCTTATTGCAGCGTTGGCAGCTCTGCATTATGGCCTCATGGGCTCACACTTACATGTATGCTCAACCTGCCGATGGGGTCACAATGTTGCACATACTGTGACTTCAGAACATGTGATAATTTTTATGAGATGGGATTATGGGAAGGTTGAAGTTCATTGATGTTTGGGGGCCAGGGACCTGCTATAGGCCTTGACAATTGTGGACTACTCGAATTATCAAGCCACGCTGAGCTATTCAAGCTCAGAGCTTGTTATGCTGTACAAACCTTGGCTGGCCATGCTCAAATCAAGCATGGAGCGATCCAAGTTTGAATTGCTCATAAGCCTTGAGACTTTTTTTACTACTGCCTGCATGGGTAGAGGTCATCTATGCCAGTATGCCTGTTCTGTTTACAGATCATATCCCCAATATGCCTTTGCAGTTTACAGATCATGTATCATTTGGCCCACTGACTAAATTACTGGTGGGTATGGGTAGGAACATGCCAACCTCTTATTATTTCGCCATGTGTAACTGGGTAATCAAGCAAGATTGTCACCCTCAAGTTATAATCTTTTGAAAAAAAAATATCTTCAGCTCTTACCTTAGATTTAAACTTGTCCTCTAACTCCAAAACCATGTAAAAGTTGCCCTAAACGTTCAGAAAGTAAACTGGACAGGACTTATTTGGGGTATATGATTAACATTCATTATCTCTCCCTTTAACAAACGTGCTCACCACACCTTGGTTAAGGAATGAGTTTTCAACTGATTTTGGAGTTGACAACTTTTTTCCTATCCTTATTTAAGCTGAAAACCACTAGGAACCAGTTCAGGCAGCATAATGTGAACCCTTTTCTAACAATATTCTGTGAACTTAATATGAAGCAAATAAAGCCTCACATGGCATACGGTTCCTTCGACATGGAGGAAAGAAAATAAGTTAAGGAAAATTCAAGCCATGTTCGCAGTGATGCCCCCAGTGGATCATGTCACCAGCAGCTTACAGTAAGAAGCTATCTGTGACTTGATCAAGGAATTAGTTGCATGTATAACATACGGCCATAATGGCAAATATCTTCTTCCGTATCTTTGTGCACATGACAGGNTATGTCATGCACCAAGGAAGCAATGCTGGATCTAGGATCCCCTTAGTTCATGCAACAAGACATACTTCTAGGCTTGAAATTTTTTAATACCTCATGGAGTAATTATTTGAATTTACAGAGGAAAGCTGGTAGATGCTTACAGATATCTGCACAAAGAGAAGGACATGGATTGTGGCTTTTCTTGGTCTGGACATCCAATTGGCAAGTAAGAAAGATTTCAATTATTATGCTAGTCTTCATTTGTTTCGTAGATTTTATTGCTGCATTATCAAAGCATGTCCATATCTGACATTGATATGTCATCTTATTACATTCCTTCATTGGTATGCATTTTACCAAAGGTTATCTTGAACAAATATTCTTTATCTGAACAGTTTGAGTTTACAATTTATCAATTCAAATGGGCTTACAGGCTTAAAGATAATCCTGTATGTTTGGCAGATATATAAATGTTCTTCTAGAAAGTTTAGCTTGCACTATGACCTGAACTGTGAAAATTATCTAAAAGTTATCCTACTTCCAGTTAAAATTGTGTCAGCTGATTCTCTTTTTTTTTTCTCTGGTAATCTAAACTTGATCCTTACACAAGATGATAAATATGATCTTCGTTAAATCTTTTCTAGTTAATATCTTAGCTAATGGGCTAACTTTTGATTCATTACAACTGGAATCCCATGAAGACTAACTGATTTAAAAATGCCTACAGGTACCGAGGGAAGAGAATGCGAATTGACTATTTCCTTGTTTCAGAAAAACTGAAGGACCAAATAGTTTCATGTGACATTCATGGTCGTGGAATAGAGCTAGAAGGTATGGGGTTAAAACATTGCTTATCATGCTTTCCATTGTGATACGCAAGTATATAAAAGCGTCATTTTTACATTTGGCCCTTTTAAAAAACTTTGTTCAAATAGACCAGAATGAAATTTGTTCTAAGAATAGACCCAAGTGTTGATCCATGGATAGGGCAAAAAGGGTCTGAATAGTGGGAGGCAACACAGCTCTCACACTACTATCTCTACGTTCTTAACATACTGATACTGTATCTCTTAGTACTTCCTAAGTATTTCGTAAGTAACTCCTAATCTCCTATCCTAGGAAACTAGTGATTTAGTGAGAGCTGTTATACTCTGCCATCATAACTCCAAGGCACGGTATGTTGCCACATCACTTGGCACCATCTGAGCTGCCGCATTAGACAACCATGGAGGGGACTTACTAGCATGTCACAGCTCAGTGCCATGTAGTGTGGTGTCATGCTCTCAAACATGGTAATAAAGGTTGAGGTACATTGTTAATGTGGTGCATAAATTTTGTTTACTCCAAATCATTTTGAAAATCTTGTTCCTGAAATAGATTGGCGCATATGTTATATTATCCCATCAGCTTGCTTAACTTCAGCTGGTTGCAACTAATATTATGCATTTTGTTTCTTTTTTTGAGGAACATAACTTGTCGAGCCTGATTAGCTAAAATGTTGTTTTACTGTATTAGACATCGAACTGCAAATACATGCTGGACTATTACTACAATACAAATTGCATGTTGTCGGAACTTGTGACCCATGTTGTGACTTGTGAGCACACTACACTGGTTTTTTGGAATTTAAAGTGCAAATGGAATACGACAGGTACCTCAACCCCATGAAAATTAGTTACATGAACCCAGGTGAACAGGACAGAGCTGGTTGTCGCAGTAGTGGTAGTAATTGCACCTTGCGCTTTGATGCTAGTTCTGGGGGTAGAGTAGACCTTTTCTGTAATTTTGTGTTGGTGAGTTCCATGTTGTAGGCAAATAGACTGTAGGAGATATGGCAGACAATAGAAAAAATCTGCAAGTTTAGAAGCTCCCTTTGGAATCCTCTTTTGCTCTTGGTTCAGTGATAAACATTTGACCTGTAACTGAAATTTTATGCATGCCTGCCAGTAATAAACACCAGCACCTTGAAGCTATTACATGGTAACTTCCATGATCTTCTCTACAAGCAATGAATCGAACAAATTTCCTTGTTTCCCCCTAGTAAATGGTAATGCCAATATGCTGTTTAATGTCATGGTACAATTCATTGACGTCCATTTTTGCAGGATTTTATGGAAGTGATCACTGCCCCGTTTCACTTGAGCTCTCGGAAGAAGTAGAAGCACCAAAACCCAAGTCCTCCAACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036372

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