BGIOSGA036392

From RiceWiki
Revision as of 08:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036392| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036392, complete gene.| tag = OsI_379...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036392

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036392, complete gene.

LocusTag

OsI_37949

Ensembl Transcript ID

BGIOSGA036392-TA

Ensembl Protein ID

BGIOSGA036392-PA

Length

3394

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:7617228..7620621

Sequence Coding Region

7620341..7620621,7620158..7620221),complement(7619470..7619623,7617654..7617837),complement(7617438..7617573
,7617228..7617329

Genome Context

<gbrowseImage1> name=IndicaChromosome12:7617228..7620621 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:7617228..7620621 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGCGCGGATCTGTCGACAGCGATTGTGGGACGGGTGGCTCCGTCACCGGCGACCGCAGGGAGGGCCGATCTGTCGCCGGAGACCGCAGGACGGACGGATTCGTCATCGACCGCGGGGAGGGCAGATCAGCCGCTGACGAAATCGGGACACCCACTCCCCCTCCCGCACATGGATCCGCCAACGGCGGGAGGGGTGATGATGGCAGTAGTGGCGGTGGGAGGGGCGACGACGATGGTGGTTGTGGCGATGGGTTCTGGGTTACTGTTCTGTGGCTAGGTTTCTACAATGCGAACGTAGCAATGTCTGGACTGGGCGATCTCCGTGGGAGATCATCCGGACTGGCGAGCCTGCGGCCTCATGGTGAACCAGCAGCTGCATCAGCAAGAAACGGAGTGTACACGACGTCACTCGAGAGGACATGGCGGACCATCGCCTATGGCGACACGGGCTCCTTCTTGTCGCCATGTGTATTCCACGGGACACTCAACGTGGCAGTTTGTTTTGCTATAAGTGTGATTACAGCATTTAGGCGGTCTGATGTGTTCTCGCTGCTTTTGAAATTGTTTTCGCATAGAAATGGCCCCAATGAATCTGAACAGGAAGAGAACATATGCACAAGAACATATGCACAACCTGTGCGTGCAAGACCCGTTGTGCGTGCAAGACCCACTGTGCCTGCGTTCAAGTACTTTGACAATGTTGAGTTTAAAGATTGCATGGTCAATAGAGCGTTTAGTGTAATTGTAATGGTAGATGCCAAGTTCCATTTAGAGGCTCATGGTGATAGGCAACGATTCATTTTGATGGATGCTCCTGCATCTTGGGTGTTAGTAAAGAGTCAAGTGACTGAAATGGTGGCCATGGCTGTTATTATCGGTGGCATTTTAGCTTCAATTTTGGTATGGTGGTATTGTTGA</cdnaseq>

Protein Sequence

<aaseq>MVRGSVDSDCGTGGSVTGDRREGRSVAGDRRTDGFVIDRGEGRSAADEIGTPTPPPAHGSANGGRGDDGSSGGGRGDDDGGCGDGFWVTVLWLGFYNANVAMSGLGDLRGRSSGLASLRPHGEPAAASARNGVYTTSLERTWRTIAYGDTGSFLSPCVFHGTLNVAVCFAISVITAFRRSDVFSLLLKLFSHRNGPNESEQEENICTRTYAQPVRARPVVRARPTVPAFKYFDNVEFKDCMVNRAFSVIVMVDAKFHLEAHGDRQRFILMDAPASWVLVKSQVTEMVAMAVIIGGILASILVWWYC</aaseq>

Gene Sequence

<dnaseqindica>1..281#401..464#999..1152#2785..2968#3049..3184#3293..3394#ATGGTGCGCGGATCTGTCGACAGCGATTGTGGGACGGGTGGCTCCGTCACCGGCGACCGCAGGGAGGGCCGATCTGTCGCCGGAGACCGCAGGACGGACGGATTCGTCATCGACCGCGGGGAGGGCAGATCAGCCGCTGACGAAATCGGGACACCCACTCCCCCTCCCGCACATGGATCCGCCAACGGCGGGAGGGGTGATGATGGCAGTAGTGGCGGTGGGAGGGGCGACGACGATGGTGGTTGTGGCGATGGGTTCTGGGTTACTGTTCTGTGGCTAGGGTTTTGATTTCTGGAATTTTTTTTTGTGATTTTCTATTAGCACGTGCAGACGGCTTAAGCGCTCGCAGTTGAATAAGCCGTCTGTGTGGATATATGAAACCCGTAATCTCCACATGTAGTTTCTACAATGCGAACGTAGCAATGTCTGGACTGGGCGATCTCCGTGGGAGATCATCCGGACTGGTATACCAAAACCTTTAAGCTTAATGGATCAATGAATTAATGGAGATGAGGGATTGCTTGTGAGACGGAAAGGCTGAACGAAATGACAGGCAGCTCACATGGCAGACCATCTGGGCTGGTATACCAAAACCTTTGGTTTAATTGATAGGATAGGGTCAATTAAACCCTAGATTGTTCAGTCCCGCACATTGTACTTCCATGCAGATACCTGCAATGTTGGTTAATCTAGTCTTCAGCAGTTATTTCTATCCTGAAGTACCTACTACAGAACTTAACAAATATAGTAACTAATATCTTGGAAACAAAACAACCCTCAGGACCTTCTTGGAACACAAGTTTTGGAACGAAAATCAGTGTAAATTACAGGGCTGAAAAGTTATAAGTTGGGCTGAAAAACGTTGTTTGTTCAGGTGGGTTTGCTTGTCGTATTATAATCTCCGATCGAGCCCAATCCACCCAGAAAAGAAATATCTCCTCCTGGTAATTAACACAAAGAAAGAACGGGGTAGGAGTACTAATCTGATCTGGTTGCAGGCGAGCCTGCGGCCTCATGGTGAACCAGCAGCTGCATCAGCAAGAAACGGAGTGTACACGACGTCACTCGAGAGGACATGGCGGACCATCGCCTATGGCGACACGGGCTCCTTCTTGTCGCCATGTGTATTCCACGGGACACTCAACGTGGCAGGTTACTTGCAGCTCCCTCTTGCAGGATTCACCAGGCAATGGCAAGATTCTGAATTCCTGATGCCACCCATTCCAAAGCAGGAACAGTTTATGCTGTCCTATGGGGATGATCAGCAAAAGATTGCGATTAAAAAAATATCATCTCATGACCTTTTGTGTTCTCCAATCCCTGTGTCTTTTTTTTCTACCAATTTAAGGGAAGTGAATAATGATCGGGACGGGTTCATATATATACCTGAGACAGTGAGACAAGGGATAATCAACATGACAGGGATGAGAGAGTAATGAGCCACCTACTACATAATGCACCAACTACTCATACTCATACTCATCATTCATCATTGGACAAATCGGACGGCCTAAATCGCATAATGAACAACCAACGATCCAGATCACCCACCAACCACCCCTCACGCGGCCTCCCCTCCCCCTCGCTCCGTAACTCCCGTTCGCCCTCCAATCTCGCCCATAGCCACCACGCGCCGCACCACTCCTGATCAATCTCGCAATTCTCCCTGCCGTCCTCGCTCCCGCTAGGATCCCTCCCACCACCGCGTCGCTAGGTCGCCGCCGAAGACAGCGACGCCCGCTTGTTGCCGCCTACCGCCTGCCGCCACCTCCAGGTCATTCGCCGCCCGCCACCTCTAGGTCCTGGCATCCTGGCTGTCCTGGCGGCGTCCTGGCGGTCGGCTCCCATGGTGGCAGCGTCCTGGCTTGCGGCCCCACCCCCGGTAACTTGATTTTCCTTCGAAGCAGGCCCTAATTTTTACATGGCTTATTTTGTGCGATTTTTGGTATAAGGAAACTTTTGTCACAGGCCTTGGTGGCGGGTCCACTAACGGGAGTCCGATCAGTGCAAATCTCTTATTCGTGCTCGAAATCCCCTGATTGCGCTCATCCCCTAATATCGCTTTCCAATTACCACACTTTCTTTCTTCTCTGAAATGTATCTCTATATATACACGAATGGGGCCTCGGCAGTCTGCACCGCACTGATCTCTGCCGCGTCCGCTGACGGGGTGAACGCGGAGACGTTGGTCCAGTGCTCGATCTAGGCGGCGGACCTAAGATGTGAGCCCAATCCCCATCCTGGTACACTCATTTGATTACTCATTTGATTGGTTTTTCTTCCACGCACTGTATGAATTCCTTTGCTTAATTCCAAATCAGGTTTTAACGTAACTGACCACTATCAACATACTGTTTTTTCATTCTCTGTCTAATTTATCTTCTTGTAGGCTACAGCCATCCTGGTGTTTTTAGTGCTGCACCTCTCTATATATATCCTTTATAGGTAAATTTTAACCCCTAATGTTCACTTTCCCCTAGAAAATCCAATTTCGTTGCTTTAATTTCAGGTAGTATATAACCTGGTTTTACAGTTTATAAACTGATGCTTCTTGTTGGACGTCATATCTCTGATTAATTTATTTCTGAACATATGAACCAAATATACGCGTGTTACTGCCATACATGTTTGATATTGGATTCAGTAAATATCTCCTATTACTTTTCATTGCCATCACTCTAGGAATATTACAGTCTCCAACGATATATATCTGAGTTGTGAAGTTACTGGTTTAACATGGCTGAGTTGTGAAGTTACTAATGAAATCATCCAAACTCAATGAAGTTTGTTTTGCTATAAGTGTGATTACAGCATTTAGGCGGTCTGATGTGTTCTCGCTGCTTTTGAAATTGTTTTCGCATAGAAATGGCCCCAATGAATCTGAACAGGAAGAGAACATATGCACAAGAACATATGCACAACCTGTGCGTGCAAGACCCGTTGTGCGTGCAAGACCCACTGTGCCTGCGTAAGTTAAGTTGATCGAATTGATTAAAGTGAAAGTAGGAAACTTATACTTTTGTGTGATTGACTGCAGCTTGTTTGTAGGTTCAAGTACTTTGACAATGTTGAGTTTAAAGATTGCATGGTCAATAGAGCGTTTAGTGTAATTGTAATGGTAGATGCCAAGTTCCATTTAGAGGCTCATGGTGATAGGCAACGATTCATTTTGATGGATGCTCCTGTAAGTTCCTTTTTCGTTTTTCAATACGTCCGATTTAGAGGCTCCCCATTTTTTATGTGTATGCTGGGCATAATATTACCTTGCTTTTTTGTGGCCCTTGCTTTTCAGGCATCTTGGGTGTTAGTAAAGAGTCAAGTGACTGAAATGGTGGCCATGGCTGTTATTATCGGTGGCATTTTAGCTTCAATTTTGGTATGGTGGTATTGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036392