BGIOSGA036396

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Revision as of 08:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036396| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036396, complete gene.| tag = OS12G02...")
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Gene Name

BGIOSGA036396

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036396, complete gene.

LocusTag

OS12G0242900

Ensembl Transcript ID

BGIOSGA036396-TA

Ensembl Protein ID

BGIOSGA036396-PA

Length

4688

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:7372557..7377244

Sequence Coding Region

7377154..7377244,7376950..7377025),complement(7376093..7376224,7375617..7375986),complement(7375449..7375544
,7375281..7375360),complement(7375113..7375188,7374875..7375042),complement(7374355..7374459
,7374184..7374279),complement(7374010..7374102,7373720..7373761),complement(7373586..7373627
,7373053..7373183),complement(7372844..7372970,7372557..7372709

Genome Context

<gbrowseImage1> name=IndicaChromosome12:7372557..7377244 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:7372557..7377244 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGAAGAGATCCGCGCGGAGTTCGAGAGCAGCGGCTTCTCCATCGGCGGCGCCGACCCGGGCGCCGCCGCCGAGATCCTCTCCACGCTGCTGACCTACTGCATCAACTACAAGATGAGCCCCGCGGATCTCGTCTCCAACTGGGAGGTCTACTACCTCAACAGGCAATTGAATGGGTTAAAGCTTGAAAGCTCATATCTGGATGGTTTTCTGTCACACCTGCAAAATGAAGTAAAAGACAGGATTATAAAAGAAGAAACAAGCCTTCACATTTATTCTAGTAATGATGTTGACATGCTCTTGAGCAGTACACACACAGATGAAGAGGGATTCCTTGACACACCAAGCACTAAACAGGAAAAGCCCAATGGAGAGTCGTGTAACTCTGAGCTTACCCCACTGACCACTGATAGGCCATCATCCAGCAGATTGGCCAAAACAAATGGCGACCGCATTACCCCGTTCTCTCAACGAGTAAATAAATTTACTCAACAGTATGTTCTTAATTCTGATAACGTGGCTAGTGTGCCAAGTAAAGACGAGATTGAATCCACAGAAGATGAAGTAATTCGAAGAGTTCAACCTAGTAAAAGGTGTACCTTGCAAGTTCAACACTCACAGCCTGAACCAGGTTGTAGGTTCATGTATGACAGAATAGAAGATAGATTTAATTATTTGGAAGATAGGATAAGGAGGTCTGGAAGCTTGTTTTCTGCATCTGGGCTTTGTGGAGAACCTGCAGATGCTACCCTTGCTTCAGAGGAGAGTATGTTTTCAGTTGGCATGGTAATTTGTGATGGGGAAGGTCATCTAAATGAAAAATCTATCTTGCTACAAGGCAGTGTTGAGCACTCCAGGGGACAGCGTGTACGCTTAGACTTGAAGGATGTAGACCGGTTTTCCTTGTTTCCTGGGCAGGTCGTTGGCATTCAAGGCCACAATCCTAGCGGGCATTGTTTTGTTGTGTCAAAGTTGAATGATTCCATACCAAACTTTGTTGATGCTCAACTGCCTCGTGCTAAGAAACAAGCTGTTGACAGTGAAGGCAACCAAAGTTCTGACGTTGTATCAAGAGTGCTATCATCAGTCATTGCAGCAGGTCCCTATACAACGAGTGATAATCTGTTGTTTGAACCTTTGCAAGAATTGATATCTTATGCCAGTCGTAAGCAGCCTCAACTTCTTATATTGATGGGACCCTTTATTGACTCTGATCATCCTGAAATAAAAAAGGGAGCTGTTGATCAGAGCTTTCAGGACATATTTCTTTTCGAAATTCTGAGAAAGCTTCAAGACTTCACCCAGTATTTGGGGCACAATGTTCGTGTGATTCTTATTCCATCCGTACGTGATGCCCACCATGACTTTGTTTTTCCCCAGCCTGCATTTGACTTGAATTTACCAGAAGACATCACGCATCAGATTACTTGTCTGGCCAATCCAAGCCTATTCAGTTGTAACGAGATACACTTTGGCTGCTGCACAATGGATATCCTGAAACATCTGAGCGGTGAAGAAATTTCTCGCAAGCCACCTGGTGAAAAGCATGGTGACAGAATTGGTAGAATTTGCACACACATATTGAAGCAACAAAGCTATTACCCTTTATATCCTCCTCCTGCTGGTGTACCCTTGGACTTTTCACTCGCTAACGGAGCACTGGAGATCGCATCAGCTCCTGATGTTCTCCTGCTTCCTTCTGACCTTGCTCCATTTGTGAAGGTGCTTTCCCTCGATGAAAGTAGCGAAGAACCTAAGCGTTTTATTTGCATGAACCCTGGGAGATTAGCAAAGGGCATTGGTGGAGGCACATTTGTAGAACTTAACTACAACGAGGACACAGACAAGACAAGCGCCTCCCTTATTCGCATCTAG</cdnaseq>

Protein Sequence

<aaseq>MEEEIRAEFESSGFSIGGADPGAAAEILSTLLTYCINYKMSPADLVSNWEVYYLNRQLNGLKLESSYLDGFLSHLQNEVKDRIIKEETSLHIYSSNDVDMLLSSTHTDEEGFLDTPSTKQEKPNGESCNSELTPLTTDRPSSSRLAKTNGDRITPFSQRVNKFTQQYVLNSDNVASVPSKDEIESTEDEVIRRVQPSKRCTLQVQHSQPEPGCRFMYDRIEDRFNYLEDRIRRSGSLFSASGLCGEPADATLASEESMFSVGMVICDGEGHLNEKSILLQGSVEHSRGQRVRLDLKDVDRFSLFPGQVVGIQGHNPSGHCFVVSKLNDSIPNFVDAQLPRAKKQAVDSEGNQSSDVVSRVLSSVIAAGPYTTSDNLLFEPLQELISYASRKQPQLLILMGPFIDSDHPEIKKGAVDQSFQDIFLFEILRKLQDFTQYLGHNVRVILIPSVRDAHHDFVFPQPAFDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVLSLDESSEEPKRFICMNPGRLAKGIGGGTFVELNYNEDTDKTSASLIRI</aaseq>

Gene Sequence

<dnaseqindica>1..91#220..295#1021..1152#1259..1628#1701..1796#1885..1964#2057..2132#2203..2370#2786..2890#2966..3061#3143..3235#3484..3525#3618..3659#4062..4192#4275..4401#4536..4688#ATGGAGGAAGAGATCCGCGCGGAGTTCGAGAGCAGCGGCTTCTCCATCGGCGGCGCCGACCCGGGCGCCGCCGCCGAGATCCTCTCCACGCGTACGCGCGCATGCCCCCCATGCTCCCCTGATTTTCTTTCTTCTTTTTTTTTTTTTGATTCTTCGGTTCATTGGTATTTCGATATGGGCGCTGATGATGCGGTGCGCGTTGCTGTGTGGTTTGTGCAGTGCTGACCTACTGCATCAACTACAAGATGAGCCCCGCGGATCTCGTCTCCAACTGGGAGGTCTACTACCTCAACAGGTCAGCTCCACTGAATTGGGATGCATATTCTTAGCCTGTTCCACCAGGAGAGTGTCAAACTTTACTAAGATGTTCTTATTTTTGTTTGAAACAAGCTTGTAGCTCTAGAATTTTTGGGAGGTTCATCCTATTAGAGTGTTAATATCTGGTACCTAGACTATTTTGGTGCGCGGGTTCTGAAGAAGTGGCGATCGTACCCAGCTTGGTATTCTTTGCCATTTAGTATCCAACAAGTTTGGTTCATACTTTTCATAGAAGGGAGAAATGAGATTCAGAAATATACGGCATATTGCAGGAGTCCCTACGTGATGTGATTGCATTATTGCAGCCGGTTCTCTGGAGCATGCAGTTCTGATCCTGTTTCCACTTTTGGTTGAGGCACAACAACATATAACTCTGGTGTCCATATTTTGTCCTTATAGGAAAGAAAATGGTTAGAAAGTAGTACTAGATAATGGTTTAGGGAGCAATGAACTTTATCTGCTTGCCAGATATTTTGTAACCCTTTTTAAGGCAGTATGAAGTAATAGTACTGGCCAGAGTGGCAGTAGCTTTCTGGTAATGTTTCTCATTATTTACCAGTTCATGATGTACCATTAGCTTTTCTGAATTCTTATTTTAAGCTGAAAAATCATACGTCTCGCAATTATACCACTGCAAAGTAACTTTTTTTTTCTGTTTCCTGTTACGTGATGCATCAAAACTGAAGAAACTGACTTTTGCAGGCAATTGAATGGGTTAAAGCTTGAAAGCTCATATCTGGATGGTTTTCTGTCACACCTGCAAAATGAAGTAAAAGACAGGATTATAAAAGAAGAAACAAGCCTTCACATTTATTCTAGTAATGATGTTGACATGTCAGTTCCATGTCCCAGCTTCACCAATGTGCATTTCTTTAAGAGTATTTTGTTATTTCATTGTTCAATGTTAAGTGAAATCATAATATACAAGTAATTTTTGCAGGCTCTTGAGCAGTACACACACAGATGAAGAGGGATTCCTTGACACACCAAGCACTAAACAGGAAAAGCCCAATGGAGAGTCGTGTAACTCTGAGCTTACCCCACTGACCACTGATAGGCCATCATCCAGCAGATTGGCCAAAACAAATGGCGACCGCATTACCCCGTTCTCTCAACGAGTAAATAAATTTACTCAACAGTATGTTCTTAATTCTGATAACGTGGCTAGTGTGCCAAGTAAAGACGAGATTGAATCCACAGAAGATGAAGTAATTCGAAGAGTTCAACCTAGTAAAAGGTGTACCTTGCAAGTTCAACACTCACAGCCTGAACCAGGTTGTAGGTTCATGTATGACAGAATAGAAGATAGAGTAAGGACAATTCTTACTTGTTTGTTCAATCTTCATCTACAACTGCTTGTTTAATTATCTTTCGCTTTCCAGTTTAATTATTTGGAAGATAGGATAAGGAGGTCTGGAAGCTTGTTTTCTGCATCTGGGCTTTGTGGAGAACCTGCAGATGCTACCCTTGCTTCAGAGGTTACTACATGCCACCTGAACTTTACTGGTTGAACTCATCATCATCCCTGTCCTGGAAGCACATCTAATTATATATTTTTATTTTTAGGAGAGTATGTTTTCAGTTGGCATGGTAATTTGTGATGGGGAAGGTCATCTAAATGAAAAATCTATCTTGCTACAAGGCAGGTAAATGTTGATTCTCAAACTCGTTCATGTGGAAAACAACATTTCATCACCCTTTCTTCTTTATGCTAACTAAATGAGATTTTTCTTTTTAGTGTTGAGCACTCCAGGGGACAGCGTGTACGCTTAGACTTGAAGGATGTAGACCGGTTTTCCTTGTTTCCTGGGCAGGTATCTGTATTCTGTTCATATCTCATATTTATTATCAATTACATTAAATTAATACCGAGTTGAATGACAGGTCGTTGGCATTCAAGGCCACAATCCTAGCGGGCATTGTTTTGTTGTGTCAAAGTTGAATGATTCCATACCAAACTTTGTTGATGCTCAACTGCCTCGTGCTAAGAAACAAGCTGTTGACAGTGAAGGCAACCAAAGTTCTGACGTTGTATCAAGAGTGCTATCATCAGTTAGTTCCTACTACCATTTGAGAAAACAATTGGATACATGCCCTTTTATCCAATGATCAATGCGTATTGATAAATTTCTTAGCTTATTGATATTTATTCACTTTTCTTTTAGCTTAATTAAATTGTCAATAACACAGGAGGTTTTAATAATACTAGGGCACTGTACATCTTATTGTTAAAGTTAGTAATTAGTTTTTGCTTCCTATATCTGTTGCTATATAGTTCGTTATGCTTCATTTACATATTCTAATTTCAGGTAGCCACTAAAAGTGTAGAGTTGAATAATAAAACCATGGATCTTAAGAAGTAACAAAAAAAATGCAACAAGTAACAACCATACTTGATTCACTGTGAAATGATAATGGAACATCAAAGCTACTGTTCTCATGTTTGAAGGTATCATATGTCTTATAGGTCATTGCAGCAGGTCCCTATACAACGAGTGATAATCTGTTGTTTGAACCTTTGCAAGAATTGATATCTTATGCCAGTCGTAAGCAGCCTCAACTTCTTATATTGGTGAGGCATTTGAATCTTGTTGAAGCAATTTAATATGTTTGGCACTCCGTACCAATTGATGTGTCTTGGATGCAGATGGGACCCTTTATTGACTCTGATCATCCTGAAATAAAAAAGGGAGCTGTTGATCAGAGCTTTCAGGACATATTTCTTTTCGAAATTCTGAGAAAGGTAGGCACCACAGAAGATTTCATGCTGGCAGGTAATGAAATACACAACTGAGTAACATTTATATTTGATGTCTTTGTCCAGCTTCAAGACTTCACCCAGTATTTGGGGCACAATGTTCGTGTGATTCTTATTCCATCCGTACGTGATGCCCACCATGACTTTGTTTTTCCCCAGGTGTGTAATTCCTCATTCAGAGCCAGGCTTGTCTTGTCTAATTTGCAATTATGAAGAGGTTGCCATTTTTCATTATCTATTAGGCACATGACTTTTATTCATCTACGACATTTTTGGCCTAAAAATATCCTATATCTTGGCATTCTGCAGCTTATCTCTCTGATAGCTTATTATGATTATTATTATTTAAGCCTTCTTTTGATGCTGCTTTCACATGCTTGACATAACTGTATTTTTGCTGCCTGCAGCCTGCATTTGACTTGAATTTACCAGAAGACATCACGCATCAGGTAGTAATACGATCTTTGTGATAATATCTGTTTTCTTGCGAAATATTTGATAATAATTCCCTTGTTCTGAAATGGTTTCACAAATTATGCAGATTACTTGTCTGGCCAATCCAAGCCTATTCAGTTGTAACGAGGTACTGTACCGTATCCAAATGAAAGAAATGATTGTGTGGTGATATATACTTTAATTATTAGAGGCAAAGTACATGTATTCTAATCGTGAAAATGTCTACAAATGGCATCCCTAGGTTATTGAATCATTTGTGCTATTCTGCTAAGAAATCAGGTTATTCCTTGTTTTCCATTAAAAATTCACATAATCCTTTATTCACATTTTAGTTCAAAAATGTCACTGACACATAATGATCATGGCAATGAATAGTAAATAAGGGAACCAGAATTTTATTGTGTTTGCCTACTAAGATATTTATTTACCTAATTTTGGAACTTGTCTGTGCTGAATACATATCATCCATATTAAGGACGAACTTATTCTATATAAGAAGTTCTCCTAAGCTGTATTACTTGTGTTCCAGATACACTTTGGCTGCTGCACAATGGATATCCTGAAACATCTGAGCGGTGAAGAAATTTCTCGCAAGCCACCTGGTGAAAAGCATGGTGACAGAATTGGTAGAATTTGCACACACATATTGAAGCAACAAAGGTAATTACATATATCTTGATAATGGTGCTACTCAGGGCAGATGTTTTTATTAATGGATTCTGATATAGTACTCTTCCTATAGCTATTACCCTTTATATCCTCCTCCTGCTGGTGTACCCTTGGACTTTTCACTCGCTAACGGAGCACTGGAGATCGCATCAGCTCCTGATGTTCTCCTGCTTCCTTCTGACCTTGCTCCATTTGTGAAGGTAATTGTGACAAGAAATGTTATTGGAATTTTAAATTGATATGCATAAATTTGAGTTGTGATCATCAGGGAGCTTAAACATGTCACTTATTGTTTCTTTTTCCTTTCCAAATGAAATGATTTACACTTCAACAGGTGCTTTCCCTCGATGAAAGTAGCGAAGAACCTAAGCGTTTTATTTGCATGAACCCTGGGAGATTAGCAAAGGGCATTGGTGGAGGCACATTTGTAGAACTTAACTACAACGAGGACACAGACAAGACAAGCGCCTCCCTTATTCGCATCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036396

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA036396&oldid=52701"