BGIOSGA036411

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Revision as of 08:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036411| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036411, complete gene.| tag = OS12G02...")
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Gene Name

BGIOSGA036411

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036411, complete gene.

LocusTag

OS12G0236500

Ensembl Transcript ID

BGIOSGA036411-TA

Ensembl Protein ID

BGIOSGA036411-PA

Length

5050

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:6994526..6999575

Sequence Coding Region

6999488..6999575,6999255..6999393),complement(6998976..6999054,6998674..6998876),complement(6997519..6997591
,6996710..6996793),complement(6996459..6996614,6995635..6995811),complement(6995299..6995373
,6995065..6995205),complement(6994526..6994747

Genome Context

<gbrowseImage1> name=IndicaChromosome12:6994526..6999575 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:6994526..6999575 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCGCCGCCGTCGCCGTCGCCCCCGTCGTCTCCGACCTCGTCGACTTCCTCAACGCCTCCCCCACCGCCTTCCACGCCGTCGATGAGGCGAAGCGGCGGCTGAAGGCGGCGGGGTTCTCGCAGCTGTCGGAGCGGGAGGAGTGGGCGGGGCTCCAGCCCGGCCGCAAGTACTTCTTCACGCGCAACCACTCCACCATCGTCGCCTTCGCCATCGGCGCCAAGTATGCTGCCGGCAATGGGTTTCACATAATCGGTGCGCATACTGACAGTCCATCCCTGAAGCTCAAGCCTGTCTCCAAGGTAACAAAGGGAGGTTATCTTGAGGTTGGGGTCCAAACTTATGGAGGTGGCTTGTGGTACACATGGTTCGACCGTGATCTTACTGTTGCTGGTAGGGTGATTGTAAGGGAGAAGAAGGATGGTGCAGTGTCGTATGCGCATAAGCTTGTAAGAGTGCAAGAGCCAGTCATGAGAATCCCCACTTTGGCTATTCACCTTGACAGGAATATCTCCTCAGAAGGTCTCAAGATTAACAACCAGAATCATCTTGTCCCTGTGCTGGCCACATCTGTTAAGAATGAAATGCAGAAATTAGTGGCAGAAAATGGTTCAGAGTCATCTGAGAGTAAGAACACCAAGCATCATCCACTATTATTGCAGTTGATTGCTAAAGAAGCGAACTGCAAGCCTGATGAGATATGTGACTTTGAGCTGCAGTTGTGCGATACCCAGCCAAGTACTGTAGCAGGTGCCATGAAAGAATTCATCTTTTCAGGAAGGCTTGACAATCTTTGCATGTCATTTTGTTCGTTGAAGGCCCTAATAGAATCGACTTCTTCTGAAGAATCTCTTGCGCATGAATCTGGTGTGAGAATGGTGGCTCTATTTGACCATGAGGAGGTTGGATCTGATTCGGCTCAGGGAGCTGGTTCTCCTGCCATGTTAGATGCTTTGTCAAGAATCACAGGGTCTTTTAACTCTTCAAATTCGAGGTTGCTAGAAAAGGCTATTCAAAGAAGCTTTCTAGTATCTGCAGATATGGCACATGCCTTACACCCCAATTATATGGACAAGCATGAGGAGAACCACCAGCCTAAATTGCATGGAGGACTCGTGATTAAACACAATGCTAACCAACGATATGCTACAAATGCTGTGACAGCATTTATTTTTCGGGAAATTGCTGAGAGGCACCATCTACCTATACAGGATTTTGTTGTTCGGAACGACATGGGTTGTGGTTCAACCATCGGCCCAATACTAGCTAGTGGTGTTGGTATTCGTACTGTGGATATTGGAGCACCACAATTGTCGATGCACAGCATCAGGGAAATGTGTGCTGTCGATGACATCAAGCACTCGTACGAACACTTCAAGGCATATTTCGAAGAGTTCACTGAATTGGACAGCAAAGTTAAAGTAGATTGCTAA</cdnaseq>

Protein Sequence

<aaseq>MASAAVAVAPVVSDLVDFLNASPTAFHAVDEAKRRLKAAGFSQLSEREEWAGLQPGRKYFFTRNHSTIVAFAIGAKYAAGNGFHIIGAHTDSPSLKLKPVSKVTKGGYLEVGVQTYGGGLWYTWFDRDLTVAGRVIVREKKDGAVSYAHKLVRVQEPVMRIPTLAIHLDRNISSEGLKINNQNHLVPVLATSVKNEMQKLVAENGSESSESKNTKHHPLLLQLIAKEANCKPDEICDFELQLCDTQPSTVAGAMKEFIFSGRLDNLCMSFCSLKALIESTSSEESLAHESGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITGSFNSSNSRLLEKAIQRSFLVSADMAHALHPNYMDKHEENHQPKLHGGLVIKHNANQRYATNAVTAFIFREIAERHHLPIQDFVVRNDMGCGSTIGPILASGVGIRTVDIGAPQLSMHSIREMCAVDDIKHSYEHFKAYFEEFTELDSKVKVDC</aaseq>

Gene Sequence

<dnaseqindica>1..88#183..321#522..600#700..902#1985..2057#2783..2866#2962..3117#3765..3941#4203..4277#4371..4511#4829..5050#ATGGCCTCCGCCGCCGTCGCCGTCGCCCCCGTCGTCTCCGACCTCGTCGACTTCCTCAACGCCTCCCCCACCGCCTTCCACGCCGTCGGTACGCCCCCCTTCCCCCCCGATTCCTATTTCCCTTCCTTCTTCCTCCTTTGGTGTCGATCGACGCAAACTGGACTGTGAATGTGTTGTCTCAGATGAGGCGAAGCGGCGGCTGAAGGCGGCGGGGTTCTCGCAGCTGTCGGAGCGGGAGGAGTGGGCGGGGCTCCAGCCCGGCCGCAAGTACTTCTTCACGCGCAACCACTCCACCATCGTCGCCTTCGCCATCGGCGCCAAGTGAGCCTCTGCTAGATCCACTTTTACCTTGTCCTCACACTCCTTGGATTGCTCGAGGCTATAGGATTATTTAATTTGTCATACTTTTTCTATTTTTTTTTGTGAAGAAACTTATCTGTAGTAATTCTATACGGTTTTGTGGATCATGAATGTCCTGATTAGTGCATTATTTATTATTGGATTATGTTGATGTGTTGTAGGTATGCTGCCGGCAATGGGTTTCACATAATCGGTGCGCATACTGACAGTCCATCCCTGAAGCTCAAGCCTGTCTCCAAGGTTTAGAGTTTGAACTCTTCGTAGTTGATTTCTGTTTATGTTAATTGGCGTGGTACAATTCGATGAATTGGCGATTAAATCCTGCTTCTTGCCACGCAGGTAACAAAGGGAGGTTATCTTGAGGTTGGGGTCCAAACTTATGGAGGTGGCTTGTGGTACACATGGTTCGACCGTGATCTTACTGTTGCTGGTAGGGTGATTGTAAGGGAGAAGAAGGATGGTGCAGTGTCGTATGCGCATAAGCTTGTAAGAGTGCAAGAGCCAGTCATGAGAATCCCCACTTTGGCTATTCACCTTGACAGGTTGGTGTTAGCAACTTATCCATTTTTGTGTTTTATTCCTGTGATTAAGTCCATGAAAATTGGACCTACATTAAATTTTAGGTCGTAATTTTGTTAGTCCTATATTGCTAGATCGGAACAGTTAATCAACCTAAACTAAAGTAAACTATAGGTCACATGTGTGTCCAATTGCCTATTTGGTTTCTTGTGGCAACTTATTTATTCTACCTACTATCCTGTAGTAATTAATGTTTGTCAAAGAAAAAAAATCTGGACTAAACCAAAGATAACAGTAGGTCCCAAATACAGAAAATCGACAACATGCTTCAGGTATCAGTTTCAGCTTGACCCTGTCAGCATGCACTTGAACCTTTTACCATTAGAAACTTAGAGTAGAAATCCACACTTCAGCTAACTGAGCCAGATGCCTAACTGAAAACATGCATCACCAATTTAAAGGAAACTCAAAGTAATACTTGTACACTCTGACATATCTAGTTTGGATGTGTTCGCTTAAACTGAATAAGAGAAGGAATTGCCATATTTGATCAGTAGTAAGATAGCTCGTATACAGATCGTGATGTCCAACATTATTTCACAACATCCTGGTCCATTTGTTCATCTTGTATTGAAACATTTTCTACAGAAATGCCATTATGTTCTTTTGTTTCAAAATTTAGTTAATATAAATTTTCTCATGGCAACGAAAACTGAAAATTTGACATATCATATTGATTAGTTATGTGAACTTTAGGTCTTCGCTAATGTAATGTACCTAGCTGTTTACATGTAATAACAACGATACATGTGGATAAAACCTTAGCTTTTAGCACCTTACACAATTGCTCTTAACACGTCTAAACTAATTTACCGTTCACAGATTAACTTTGAAGAAATGTTTTGAGAATAAATCACTATATTTAATTAGTCCAATACTTTGGTTTGTCATGCCCACTTGCCAGTACTTTGAAATGTCATTCTCACCATGCATTTACTTTCAATAGTGCAACCTATGCTGGACATAAATCCTGTTATGTTTCGATGCTTTTATTGCTTATAATAGTAAAGAGTAATTTCATTTGTCTTGCTTAAATTATGTACAGGAATATCTCCTCAGAAGGTCTCAAGATTAACAACCAGAATCATCTTGTCCCTGTGCTGGCCACATCTGTTAAGGTGATTTGAATACATTGGCCAGTGTCTGAGTTTCCTTTTGTTTTATGGAAACTAGAAATGTATCCCATTAATATGACATGTTAGGAAATCCACTAACAAGCGTTCTAGATACAAACTCTGGTAAATCTTCATGCCTCTTCATGCCAAATAAACAGGCTCAAAGAAGAATCTAAAGCCATGCTGAACTTGGCTAGTTCATGCACAAAATTGCATTACAATCGCTAGGACCAAACATGAGATTAATAACATCCAAACCAAGCAAATAAGTTCTTTTGGCTTCTATAACAATTACTGTGCCATTGAAGCAATTAGTCCTTGAAAGTAACTATTGAGTAAATATGGCAATCTGGAGCAATACAATATTTTGTTCGATAACAATTACTGTGCCATTGGAGCAATTAGTCCTTGAAAGCAAATATTGTATTTTGTTCGTTGAAGGTTTGTCTATGCTGTTTTCAGTTCACCTATAGTTCCTACATTTATGAATTTACTTATTTGAAATACTATTGCTTGACTTTGTGTAAAATCTAGCTCCTTAATTACGCCACTTTGTAAATTTTCTATGTTGTTGTGTTTGCAAATCGTATTTTCTGCTGAGGGAGGAAATTACTTTCATGCAAGCGTTTTGCTAAAGAACGTTTAAATATTTCTTTCACTTCAACGAACAAAATACAATATGGCAATCTGGAGCAATACAAGACTGAAGGCAATACAATATTTTGCAGAATGAAATGCAGAAATTAGTGGCAGAAAATGGTTCAGAGTCATCTGAGAGTAAGAACACCAAGCATCATCCACTATTATTGCAGGTACTTATTTTGTGTAGTATACTAATTCCATTGGACAAATAGGTTCACAAATAATACAAAACTCCTGATATATCTTTCTTTTAAATTTGTTGCAGTTGATTGCTAAAGAAGCGAACTGCAAGCCTGATGAGATATGTGACTTTGAGCTGCAGTTGTGCGATACCCAGCCAAGTACTGTAGCAGGTGCCATGAAAGAATTCATCTTTTCAGGAAGGCTTGACAATCTTTGCATGTCATTTTGTTCGTTGAAGGTTTGTCTATGCTGTTTTCAGTTCACCTATAGTTCCTACATTTATGAATTTACTTATTTGAAATACTATTGGTTGATTTTGTGTAAAATCTAGCTCCTTAATTACGTCACTTTGGAAATTTTCTATGTTGTTGTGCTTGCAAATCGTATTTTCTGCTGAGGGAGGAAATTACTTTCATGCAAGCGTTTTGCTAAAGAACGTTTAAATATTTCTTTCACATGTTTCTAAGTGTATTATTACATTTACTTAATTTGAACTAGTACGGGGATTTTTTATAAGAAAAAGAAGATAGAGAAACAACAAACAATGACATCAAAATTAAGTTGTAAAATTTGCTGGAAGTAATAGCTCATCTTCTCACCTTCTATTCATTCCAAATTTGTATAATGGAGCCCCTCTTGTATCATGAATCGCAATCGTGATTGCTATTGAATGGGTTAGCGACCTAGCATCCTTTATAACTCTAGTTAAGTGCTACATCGTGTCGTCATTCTGTATATGTGCTGCTCTAGAACAGAAAGATACCTTTCCGTTGTGTACTTTAAGGCAATAAAGTTAGTCAACTGCATCCCTTTCTAAAGAACTAATTATTTCTTTCTTCTTGCGAGCAAATAATATGCAATTACTTAACCCCTATACTGTTTCAGGCCCTAATAGAATCGACTTCTTCTGAAGAATCTCTTGCGCATGAATCTGGTGTGAGAATGGTGGCTCTATTTGACCATGAGGAGGTTGGATCTGATTCGGCTCAGGGAGCTGGTTCTCCTGCCATGTTAGATGCTTTGTCAAGAATCACAGGGTCTTTTAACTCTTCAAATTCGAGGGTACTAACTGATTTTCATTACGCAAGAATAAAGCATATATTTCTGTTTCAGTTGGTAACCAGATCTGTTACTTTCATTAAACAATTTTGTTTTTGTTGACCATGTAATGTGGCATGGCTTAAAGGATACTTTAAATAAACTGTTTGCACATATTGAAATAGTTCTCCCCAGCTCCATTATGCACATTACAAACAACTAGACTGTTTGCAGTCTGTGTACCTATTTAGGTTTACATTGTGACAATCTGCTTTTAATTTTCAGTTGCTAGAAAAGGCTATTCAAAGAAGCTTTCTAGTATCTGCAGATATGGCACATGCCTTACACCCCAATTATATGGTAAGATTTTCTTTGCATCAGTATCTGAGATTTGCAGTTATACAGCAACAATTAAATTAAACCTTTTGAACCTATTTCTATTTATCTTTGCAGGACAAGCATGAGGAGAACCACCAGCCTAAATTGCATGGAGGACTCGTGATTAAACACAATGCTAACCAACGATATGCTACAAATGCTGTGACAGCATTTATTTTTCGGGAAATTGCTGAGAGGCACCATCTACCTATACAGGTTAGTTCATGTATGAAGGATCCTTCTATAACAACTGTGAAATAGTGCTTTGTTCTGAACTAATCAAGTTGTCATAGTCTCTAAGTTCAAAAATATGTCTGGCTAATCTATTGACCTTGACTCCTGCTCTATCAATATATAAGACAAATTTCTTGCCTTCCTTTTCGGAAAAAAAAATCTATTGACCTTGAGATGAATAAACAAATTAGATAAGCTCTTGAACAGTTTGTGCTTATCCAGTTTAAGAACAAGGGGCTATTACTTGTTTAAACAAATTGGAAATCAATAAAATCTAATTTCTGCATTCATTTTTGCAGGATTTTGTTGTTCGGAACGACATGGGTTGTGGTTCAACCATCGGCCCAATACTAGCTAGTGGTGTTGGTATTCGTACTGTGGATATTGGAGCACCACAATTGTCGATGCACAGCATCAGGGAAATGTGTGCTGTCGATGACATCAAGCACTCGTACGAACACTTCAAGGCATATTTCGAAGAGTTCACTGAATTGGACAGCAAAGTTAAAGTAGATTGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036411

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