BGIOSGA036419

From RiceWiki
Revision as of 08:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036419| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036419, complete gene.| tag = OS12G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036419

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036419, complete gene.

LocusTag

OS12G0233800

Ensembl Transcript ID

BGIOSGA036419-TA

Ensembl Protein ID

BGIOSGA036419-PA

Length

3966

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:6786875..6790840

Sequence Coding Region

6790784..6790840,6790608..6790676),complement(6790247..6790333,6789116..6789199),complement(6788846..6788905
,6788588..6788775),complement(6788446..6788500,6788262..6788301),complement(6787945..6788177
,6787261..6787338),complement(6787048..6787173,6786875..6786970

Genome Context

<gbrowseImage1> name=IndicaChromosome12:6786875..6790840 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:6786875..6790840 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTAGCAGTGGCGCAGACGCACCGACTAAGACAAGCAAGGCATCTGCACCTCAGGAGCAACAGCCACCTGCTAGTTCAAGCACTGCAACACCGGCTGTTTACCCAGATTGGGCCAACTTTCAGGGATATCCTCCAATTCCACCACATGGCTTCTTTCCATCACCTGTGGCATCAAGCCCACAGGGTCATCCTTACATGTGGGGAGCTCAGCCTATGATACCACCATATGGAACCCCACCACCACCATATGTCATGTATCCTCCAGGAGTATATGCTCACCCATCTATGCCTCCGGGCGCACACCCATTTACTCCATATGCCATGGCCTCTCCAAATGGCAATGCTGATCCTACTGGAACTACAACTACTGCTGCTGCTGCTGCTGGCGGTGAGACGGGTGGCAAATCCTCTGAAGGAAAAGAGAAAAGTCCCATTAAAAGATCTAAAGGAAGTTTAGGTAGCTTGAATATGATTACAGGGAAGAACTCTACTGAACATGGTAAAACCTCTGGGGCATCAGCTAATGGAGCCATTTCTCAAAGTGGGGAAAGTGGAAGTGAAAGTTCTAGTGAAGGAAGTGAAGCAAATTCTCAGAATGATTCACATCACAAGGAAAGTGGACAAGAGCAAGATGGAGAGGTTCGAAGTTCCCAGAATGGTGTATCACGTTCACCATCCCAGGCAAAGTTGAATCAAACTATGGCAATCATGCCAATGACATCAAGTGGTCCAGTACCTGCTCCAACTACAAACTTGAACATAGGAATGGACTACTGGGCCAACACAGCTAGCTCCACTCCAGCAATACATGGTAAAGCAACCCCAACTGCAGCTCCAGGGTCTATGGTTCCAGGAGAGCAGTGGGTGCAGGATGAACGGGAACTCAAAAGGCAGAGAAGAAAACAATCCAACAGGGAGTCTGCTCGCAGATCTAGGTTGCGTAAGCAGGCTGAATGTGAGGAGTTGGCTCAACGTGCTGAAGTTTTAAAGCAAGAAAATGCTTCACTTAGAGATGAAGTGAACCGGATCAGAAAGGAGTATGATGAGCTTCTATCAAAGAATAGCTCATTAAAGGAAAAACTTGAGGACAAACAACACAAAACTGATGAGGCAGGAGTTGACAATAAGCTGCAACATTCTGGTGATGACAGCCAGAAAAAAGGAAACTAA</cdnaseq>

Protein Sequence

<aaseq>MGSSGADAPTKTSKASAPQEQQPPASSSTATPAVYPDWANFQGYPPIPPHGFFPSPVASSPQGHPYMWGAQPMIPPYGTPPPPYVMYPPGVYAHPSMPPGAHPFTPYAMASPNGNADPTGTTTTAAAAAGGETGGKSSEGKEKSPIKRSKGSLGSLNMITGKNSTEHGKTSGASANGAISQSGESGSESSSEGSEANSQNDSHHKESGQEQDGEVRSSQNGVSRSPSQAKLNQTMAIMPMTSSGPVPAPTTNLNIGMDYWANTASSTPAIHGKATPTAAPGSMVPGEQWVQDERELKRQRRKQSNRESARRSRLRKQAECEELAQRAEVLKQENASLRDEVNRIRKEYDELLSKNSSLKEKLEDKQHKTDEAGVDNKLQHSGDDSQKKGN</aaseq>

Gene Sequence

<dnaseqindica>1..57#165..233#508..594#1642..1725#1936..1995#2066..2253#2341..2395#2540..2579#2664..2896#3503..3580#3668..3793#3871..3966#ATGGGTAGCAGTGGCGCAGACGCACCGACTAAGACAAGCAAGGCATCTGCACCTCAGGTTTTGGAATACATGCCTGACAACATAATCTCTGTACCAAAAGATATATATGAACACTTCATTCCTAAAAAGCTGTTTCTTTTTTCATTTCTTTGTTTTAATAATAGGAGCAACAGCCACCTGCTAGTTCAAGCACTGCAACACCGGCTGTTTACCCAGATTGGGCCAACTTTCAGGTGAGCAGGCATTTTTCTCTGTTTAGGTGATTGGTAACTTGGCACTGATGCCACCTTGGGGTGCAACAAATTGGGGAAATAAATATGTAGTGCCTTAATATTTAATGCTCCATCTGGTTGCTATATTTTGGGACAGAGGGAGTAGCAAACTAGCAATTACAGTCTCTAATGCTTAATGGATAAAAAATGACATTATCTCAGATTGCAGTTCTCATAGCATGCGACAGATTTAGAAAGATAGTATGTTATGTACTCACTCTCCTTTTTTTAGCAGGGATATCCTCCAATTCCACCACATGGCTTCTTTCCATCACCTGTGGCATCAAGCCCACAGGGTCATCCTTACATGTGGGGAGCTCAGGTTAGGTTTCCTTTTGTTTAAATAACAGTGGGGACTACTCCTGTACTCCCCACTGTTATTTTTTCCTTTTTCATGTTGGAAATGATCTCTCAGAATGTCTGAAGGTATTCAAAACTCTGATGGGGGAGAATCATGTAGATCAAACTTCTAACTATGTGATTTGATTTGTTTGAACAAGTTGTCTAGAATAGAGAATTCTTTATATGCCACCGGAAATACCAGCTTGCTTTCATATGCATTACTTGAACTATGCCCTCATATGCCACTGGTTTAATTTTCCATGCCCCGTTATGCTACTCGCCCACTCCTGTTGCTTAATCTCAGAAAGCCATGTAGCATGGCCTTCTTTTCTCCTAAATGACAAAAGGTGCATTGATCCCATGGAGTATCAGTCCCACCACCGCTGCAACTTCCTCTCTAGCTCTCCATGGTGGGGGCAACCTTGTCCTTTCTGACCTCGTCTCCATACTCCAGTGCCCCCAGTCCCATGACCTAACCATGGGCATGCACTGAACTGAAGAGCTCGGCTGCTTGGGCTTCTTTGGCCATTCTCAATTTTTTGCAGTGGGCCCCACAGACTGAACTGAAGAGCTTCAATCAATCCAAACTTGTGCCAAGGCTACAGTGTGTTTGGATTATCTTTTAACAAAATTAACGGGACGTTCACAGGATTGCTAGATAAGCAAACAAGATTGAGAATAAATGGCAAATAAGAAAATGGCAACTTTCACTGGCAAATAAGTAGACCTAGTAACTTTGTGCATCAAATATAGAAATGGTAGCATGCATGCTCGGCTACCGGTGATATGACAATTTTGATGTGAATGATACATGGTTGGTAACTATAGTATGTTTAAAGAACTGCCAGTTGGATGTTGGCTTGCCAGGATATAGATATGCACAGCAGGCCATTGAACACTCTTTAGTTAGCTTTCTCTACAATGTTGAACTATTCATCTGGATGATGCTTCTTTATTTTACATAGATTCATTTGATGTAATAATATAGATTTGTTTTGTTCTCATTTTTCCTTTCACTCTTTTACAGCCTATGATACCACCATATGGAACCCCACCACCACCATATGTCATGTATCCTCCAGGAGTATATGCTCACCCATCTATGCCTCCGGTATGTTCCACAGATTGCTGTAATTTATTATATTCTTGTCTGTAAAAAGCACAATTGGTAGTCTCAAAATAATATTGCTACCTCCGTCCCAAAATATAAAGGATTTTGCCCATGTTTATAAGGCAGAATCCCTTATATTTTGGGATGGATGTAGTACTAAATATCATTGCTGAGATTTGACTTTCGTTTTGTCATTGAACAATCCTGCAGGGCGCACACCCATTTACTCCATATGCCATGGCCTCTCCAAATGGCAATGCTGATCCTACTGTAAGACATGCCATATTTGGTTCGAAAATTTCCTTTTTCTTGTGGAATCTAATGTTCCTTACCATTCCAGGGAACTACAACTACTGCTGCTGCTGCTGCTGGCGGTGAGACGGGTGGCAAATCCTCTGAAGGAAAAGAGAAAAGTCCCATTAAAAGATCTAAAGGAAGTTTAGGTAGCTTGAATATGATTACAGGGAAGAACTCTACTGAACATGGTAAAACCTCTGGGGCATCAGCTAATGGAGCCATTTCTCAAAGGTTTGTGCATTGTCACCTTAGCCAACAACAACAATCTTGTTTTAGAAACTTCTTGTGTCGGTAAAAGAATTTCTGCTTCTATTGCAGTGGGGAAAGTGGAAGTGAAAGTTCTAGTGAAGGAAGTGAAGCAAATTCTCAGAATGTAAGTTCTGCTCAGGCAGTTTTGTTCTTGGGGTTCAAATGCACATGGCCACATGTTTTACAATTTTTAGACAATTAATATACCATAAAGTTGCTATTGAACTGGTATAAGTAGTAATAACTTTGCATCATTATGTCTTTGTAGGATTCACATCACAAGGAAAGTGGACAAGAGCAAGATGGAGGTGTGCCTATGAACATCTCTATGGTTGCTAGTGTTCCTTATTGCTCGGATTGAAACCTCTTAATTTTTCTTTGCATCCTGTCAGAGGTTCGAAGTTCCCAGAATGGTGTATCACGTTCACCATCCCAGGCAAAGTTGAATCAAACTATGGCAATCATGCCAATGACATCAAGTGGTCCAGTACCTGCTCCAACTACAAACTTGAACATAGGAATGGACTACTGGGCCAACACAGCTAGCTCCACTCCAGCAATACATGGTAAAGCAACCCCAACTGCAGCTCCAGGGTCTATGGTTCCAGGAGAGCAGTGGGTGCAGGTTTGTTCTATTAGCCCTTCCCTTCAAGAACCGTGCACTTGTAATATTTTCTTCCCGTTGTAGTATTCGCTGCTGTGCTTCATACATGCTTTTCTCCACTTAGGGTTCCGTTAGCAACCCTCCATTAAGTACTATAGGATGAACAGTGCATTTATCGGTGTGGGATGGACGGAACCCTAATGGCGATGGTATTTATGGGACAAAATCGCTTGTACGATGACATTTTATGGAACTTGCACTCGTTGATGGCATTTCTTGGATTTGGGTGTTTGTCAATGTCATTTCTTCTTAGGTACAGACATTCATCAGAAAAATCGTGGTGTTAGTATGGAGTATGAATTTCATAGGCGCATTTCAAGTTAAATTGATATATTACAACTTTTTATTCTTATTTGGGTGCTCTTCACCTCTAAAATTATGTATTTTCTATCTCAATCCTTTCATTTTGGCATGCCATCATTCAAAATAAGATGTTAGTCCTTATATGAAATACAAAAACCATAGAAATGGCACTTAATCATCAACAATCCTATGGATACAAACATGAAGTTTTCAGTTTTTCTGGCAAATGGAGAAATTAGTCGTGTTGACTCTCCCATGATTCAGGATGAACGGGAACTCAAAAGGCAGAGAAGAAAACAATCCAACAGGGAGTCTGCTCGCAGATCTAGGTTGCGTAAGCAGGTATTTGTTTGTGCATTTCAAGCTATACTGGATAGAATTATCTTTTGTAGTGCCTTCAATTGATGAAGCCTAACTTAAATTCTGCAGGCTGAATGTGAGGAGTTGGCTCAACGTGCTGAAGTTTTAAAGCAAGAAAATGCTTCACTTAGAGATGAAGTGAACCGGATCAGAAAGGAGTATGATGAGCTTCTATCAAAGAATAGCTCATTAAAGGTTTGGTTTCTCATTCTTCGCTCTCTTGCTATTCTGAAATATATACTTTAACACTGTTTTTGTTTTTTGTTCTGTAGGAAAAACTTGAGGACAAACAACACAAAACTGATGAGGCAGGAGTTGACAATAAGCTGCAACATTCTGGTGATGACAGCCAGAAAAAAGGAAACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036419