BGIOSGA036422

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Revision as of 08:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036422| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036422, complete gene.| tag = OsI_378...")
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Gene Name

BGIOSGA036422

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036422, complete gene.

LocusTag

OsI_37882

Ensembl Transcript ID

BGIOSGA036422-TA

Ensembl Protein ID

BGIOSGA036422-PA

Length

5727

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:6688149..6693875

Sequence Coding Region

6693485..6693875,6693191..6693320),complement(6692384..6692788,6691388..6691467),complement(6688534..6688682
,6688149..6688271

Genome Context

<gbrowseImage1> name=IndicaChromosome12:6688149..6693875 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:6688149..6693875 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGGCGACGGCGGCAACGGCGCCGCCGATGGAGGAGGGGAGCACTTGGAACTCGACTTCTTCCCGTCGCCGCTCCTGGACAACTTCGACGTGCTAGAACTGCTCGATCTCTCCGTCCTTGGAGACGTCGACGACGACGGCGCTCCGCCGGCGCCGGCGCCGGTGCAGATGAGCGTGGACGGCGCCGGCGGCGGCCGGATTAATAAGCCTGGTTCCTCCGTCGACGATCTTGTGGACTGGTCGACCGCGTTTGGTAATAACTGCTCTAAAATCGACGGCGAGTACGGTGGTGCGTCGACGTCGTCGTCCGCCGCTCCGGCGCCGGCGCCGCCGCAGGAGGACTACTGCAGTGGTTGCCAAGTGCTAAGAGAAGTAGTGCATTCCAATGGGTTGGAGATCACGAAGCTTTGCATTCATGGCGGCGTCGCTAGTGGTGAGTTCTACCATGCAATACTGGACGTGTACCGTGTCAGCGCCTCGGCCCCGGCTCCGGCGCTGGCACATCACTCCATCATCAATTTCAGAGGGCGGGGCTACGACTGGGTGAAGCAGTACCTGACGGAGTACGCACTCCGGCGAGCCGGCGGCGGCTTCGCCGTCGTGCAGGACTCGCTGTCGGCGTTCCACGACGCCCTCTGCACCACCATGGCGCCTTGCAGCAGCCATGTCGGCGACGACGACGCACATAGAAGAGCATCGTCATCATCAGCAACAGCAGCAGAAGAAAGAACTAATGGCAATGGTGATCATGGTCAACTCGTCGTCCACAATGCTGCCGTCCTGCCAATGCTAGAATCATCACGTTGCCTTGTGGCAGCAGATCAAGCAGCAACAACTAACAACAATGGCAGTGGTGATCGTCGACTCCTCGTCCTAGACACTACTGCTATCCAGCCGCCAGCATCAGGTTGCATTCTGCACATGGCCTTCCCAAGCAAGTCATACCAGTCATCACGTCCAACAACGCTTCCATCTCGCTACCAGGAGTGCACTTGCAATCCAGGGAGAAAACTAAGCAGCTTCAGCTTAGCGACATTGCCCCCTACTTTGAACTACCCATCGCCAAGGCTGCTAAAAAGCTGGATATATGTGCCACTGCTCTCAAAGGCATCTGTCGTAAAACATGGCGTATTACGCTGGCCATATCGAAAGGTGAGAAGCATCGATAGGCAAATTGCGACTCTACGGAGATCTGGTAATGGAGATGCAACAAGGAACGAGATTGAAACATTGATTGCTTCGAGGAGAAGGATAGTTGCTGATCTTGATCAATAA</cdnaseq>

Protein Sequence

<aaseq>MAGDGGNGAADGGGEHLELDFFPSPLLDNFDVLELLDLSVLGDVDDDGAPPAPAPVQMSVDGAGGGRINKPGSSVDDLVDWSTAFGNNCSKIDGEYGGASTSSSAAPAPAPPQEDYCSGCQVLREVVHSNGLEITKLCIHGGVASGEFYHAILDVYRVSASAPAPALAHHSIINFRGRGYDWVKQYLTEYALRRAGGGFAVVQDSLSAFHDALCTTMAPCSSHVGDDDAHRRASSSSATAAEERTNGNGDHGQLVVHNAAVLPMLESSRCLVAADQAATTNNNGSGDRRLLVLDTTAIQPPASGCILHMAFPSKSYQSSRPTTLPSRYQECTCNPGRKLSSFSLATLPPTLNYPSPRLLKSWIYVPLLSKASVVKHGVLRWPYRKVRSIDRQIATLRRSGNGDATRNEIETLIASRRRIVADLDQ</aaseq>

Gene Sequence

<dnaseqindica>1..391#556..685#1088..1492#2409..2488#5194..5342#5605..5727#ATGGCGGGCGACGGCGGCAACGGCGCCGCCGATGGAGGAGGGGAGCACTTGGAACTCGACTTCTTCCCGTCGCCGCTCCTGGACAACTTCGACGTGCTAGAACTGCTCGATCTCTCCGTCCTTGGAGACGTCGACGACGACGGCGCTCCGCCGGCGCCGGCGCCGGTGCAGATGAGCGTGGACGGCGCCGGCGGCGGCCGGATTAATAAGCCTGGTTCCTCCGTCGACGATCTTGTGGACTGGTCGACCGCGTTTGGTAATAACTGCTCTAAAATCGACGGCGAGTACGGTGGTGCGTCGACGTCGTCGTCCGCCGCTCCGGCGCCGGCGCCGCCGCAGGAGGACTACTGCAGTGGTTGCCAAGTGCTAAGAGAAGTAGTGCATTCCAATGGTACATCACATTAAATCTTCTCGATGTTGATCATGGATGAAAACAAATAATGCCAAATAATGGGATGAGCATTAATTAATATTAAAAAAAATGCTAATGATATGTACCAAACGTTAGTCGAGATACTTCGCTTTAATCTGGTTGTTCTTATTATGAACTTCTAGGGTTGGAGATCACGAAGCTTTGCATTCATGGCGGCGTCGCTAGTGGTGAGTTCTACCATGCAATACTGGACGTGTACCGTGTCAGCGCCTCGGCCCCGGCTCCGGCGCTGGCACATCACTCCATCATCAAGTAAGATCATCACCCGAGTAAATTGATTAACTCAAAGTAATACCTAAAATGACATTATTTTCTCTAGATTTCTTGTCCTGATTAAATCTTATACTCTCTCCATTTTTTGAATAGATGGCGTCATTAACTTTTAAACACACGTTTAACCATTCGTCTTATTTAAATTTTTTGTGCAAATGTTAAGATATAAATCATGCTTATAATACTTTTAGTGATAAAACAACTCACAATGAAATAAATGATACCAACGTACATTTTTTAAATAAGACAAATGATCAAATTTAAGTGTGTTCGAAAGTTAATGGTATCATCTAATTAAAACGGAGGTAGTATATGCAAGTGATTTGATGCAAGCTGATCGATTGATTAATCCACTATATATATCCATCCAATGAATCGCAGTTTCAGAGGGCGGGGCTACGACTGGGTGAAGCAGTACCTGACGGAGTACGCACTCCGGCGAGCCGGCGGCGGCTTCGCCGTCGTGCAGGACTCGCTGTCGGCGTTCCACGACGCCCTCTGCACCACCATGGCGCCTTGCAGCAGCCATGTCGGCGACGACGACGCACATAGAAGAGCATCGTCATCATCAGCAACAGCAGCAGAAGAAAGAACTAATGGCAATGGTGATCATGGTCAACTCGTCGTCCACAATGCTGCCGTCCTGCCAATGCTAGAATCATCACGTTGCCTTGTGGCAGCAGATCAAGCAGCAACAACTAACAACAATGGCAGTGGTGATCGTCGACTCCTCGTCCTAGACACTACTGCTATCCAGCCGCCAGCATCAGGTTGCATTCTGCACATGTACGTAGTGCAATTTCGATCGTGATCTTAATCTATACTCCTTCAAAAATTTAAAGGCTAGCTCCAATGATAGTGAATCTGTCATACCATCTACTCCTATTACAATTTTTAGTTATTACTCCTTGCACTTTTTAATATTATAAATAACTAAATCTAAATGGATAGTCGCATATAAAATTAATGTTGGTAGCCACATTTTCCAAAAAATGTGGATAACATATTTTTATGGAAAATGTGTTTTATTTATTTTAGAAAATATTGTGATTTTTCTTTTATCCATAGCAAATTAAGCACAGACATTTAGCTAGTTATATTATATATTTGTATTGTAAGTTGATTTAACTTTTTCCTATGTTAAAATTTATCAAATTTATAGGAAAATGTAGTAACTCTTTTAACACTAGATTAGTTCTATTGAACCTAATTCTATTTGTTTTAATAACTTTTCAATTTTCATGTTAGCAAAAAAATAATTTTCTATAATTTGTGCAATTGAGTTTTAATTCAATTCATGCCGTACATCACATATATTTCACGCAAAGTACAATAATATAACAAACTTTGGGCACAATAACCTCTTTTGGTTTCCACCCTAAAAAAGTTTTGGCTTCCAATTACTGTTCTTTCAAGCAACCGATTGGAAGTAGTGTAATAAAAATCAAACCCTGGAAATTGATAGTATGTTAGTTTGGTGTTGAAAAATGTTGATATATTTTTTTATAAATTTTATCGAATTAAAATAAGTTTGATTTAGAAAAAAAAAAGTCAAAGCATCTTCTAAAATGGAACGGAGGGAGCACATTGCTAAATAATCGTTCATGAATCGATTAAAATTCAGTTCTGGAGTTGAATTACCTAGCTAGCTTTGCCATGGCTAACCCCATCATGCATGTTTGGTACATTTGTGTATTTGCAGGGCCTTCCCAAGCAAGTCATACCAGTCATCACGTCCAACAACGCTTCCATCTCGCTACCAGGAGTGCACTTGCAATCCAGGTACGTATAATATACTACCTCCGATCTATCTTTTAAATATGGCAAAATTTGCTATAGAACACTTAAAAAATATATAATTAGCTGTGAAACATCGTAAAATCGTGAATTTACCCGAAGACACTTAAAAAAGAATGATAATTTGTTGCAGAACACTAGACGCATTAAAATATAACATCTATTCAATTGATGAGAGAGAAATGATATAAAATAACAATTTTCTCCCTTCCTCGGTTTTCTTTGGATGCTTCTCAGTTGCCTATGAAATGGATGGAGTACGTAGTTCACTTGCTCCCATTTGCTGGCCGGAGTTGCTAGGCTATAACGTAACAAACGTACGTGTCAGCTACGTGCTGCCCCAGCCATCCATCGAGCCTGCTGTCGCGCGCGGCTACAACCAAGCAAACAAAAGCTTTGCTGCACGTTGCCGCGCGGGGACTCCTGCTGCTGCTCGGTCGCCTCCACCTACTTGGCGCGCTGCATGCCGCATGCTCCGGTCCCTCGCCACGGCGCACGGCCTGATGCTAGCTGCTGCTCCGACTCGGACGACGGCATCCGCGGCCGATCGAGGAGTTTATGCAGGCACGTGAACTGGGCGCCTTCGCGCGCTATGGCCGCGCGCGACGTCGCGTTCGCGCCCTATGGTGACTGGCGACTTGGCGCGAGTGCTGGCGCCAGGCGCGCCGCATCTGCGTGGTCCAGCTAGCTCCTCAGCGTGCTCTCCTTCCACCGTGTCAGGGAGGACTCTCCGTGGCGGCGGGCGTGGCTTGCGATTTCACTGGTAGCAGGGTGCGGACATGACACTACTACACACATAGTTTTCCGGTGCAGTCGATTTGGATTTTCGCGTGCAGAACTTCGGCCCGTCTAGAGCAATTCGTCTGTGAAAATCGCTATTTTTGTGTGCAGTGGCGCAACCGCACGCGAAACGGGTGCTTATATCGCCCGCATGCAAAAACAAAAAATCGAAAAAAATAAAATTTCAGAAAAAAACAGAAAACCCTAGATCAGGTCGTCCCCGCCGCTCCCGCCTCGTCATTGTCGGCGGCGGCGCTGCCGCCGCCTCCCGCCGGTCTCCTGCGCTGGATCCATGGCGGAGGGAGGGCGGCCGGCCGTCGGATCCGGGCAGGGACGGGCACTCCCGTCGCTGCCGGGGAGGGGAGGGGAGGAGCCGCAGCCGCCCGTCGTCACCCGCCTGCCCGCCGGATCCACCGCCCACGCACTCGCCGGGGAGGGGAGGGGAGGGGAGGAGCCGCGGGCTGCCCGTGCCGCCTGCGCTGCCGCCGCCGCCGCCGAGCTCACCGCCGTCCATCCTGTGGAGAAGTAGGCAGAAGAAGAAGGTGAGAGAGAGAGAGGAAAATGAGTGGAGGAGAAGGAATGTGAGAAGATAAGGGAGAGAGAGAGGAGAGAAGGGGCCGGGGGGAAGAGAAGGAAGTTAAATTATTTTGAATAGGATGGGAGGGAACGCTATTTTTCCGTGCGGGTGGATTAGGAGGCCCGCATGCGAAAATAGGGTTATTTTTGTGTGCGGGCCTGTTAAGTGACCCGCACACGAAAATTGATTTTCGTGTGCGGGCGAGAACCTGGCTTCGCTCGCCCCACTTTTCCGTGCGGTCTAACTTACGGACCGCATGGAAACAAAATGGGGGTGGCGTCCAAGAAAATCAATCCTGTAGTAATGTGAGAGGAGCGTCGAAGAAGACCGAGAGAGAACGGAGAATAAGAATAGGGCAAAACTGTCATTTTATGTTATTTCTCAATCATCAATTGGGTGAATATTATATTTTAATACATCTAGTGTCTTACAGCAAATTACCATACTTTTGGAGTGTCCACAGGCAAAGTCGCGTCTTTACGATGTCTCATAGCTAATTACATATTTCTCGGATGTCCTGTAGCAAATTTTGCCTTTAAATATATGATAGAGTTGACACTTTTAATTTATTGAACTACTCATCTTTTCTCTACAAATATTTGTGCAGATAGACAAACATATATTAGGCATTCTTAAAGTACTTTTCTTTCCATGATAGATCTAATGATACTCTTTTCACTCTATTACTTAACTGGGTAACTGAAGAAATAATGGTTATCAAAATTTGAGGGAAACAAAAAGAAAAAAATGATGCTGTATATTTACGACATATTGGATATCAACACAGTCTTCAATTAATAGACATTTTTCATCGTCACATTTTCAAGCTATATATTCATAAAAGAGTATTTAAACGTAAGAATAAAAGTGTTTTTTATGGCAAATCCACTCATATCATTTTCACATATACCCCAATATGTATGTTAACACTTTTACATTAATTATTAATAATTTAAGATTTGGAAGTTTTACTACAGTTATATTAAGATGCATTTTCCCCGTAAAAAAAATATTAAGATGCATTTCATCTATTCGAGAATAAAGTATATCAAGATATGATATGCTCTAAGAAAATGAGTAGCTAGGATGAGTAGGGGATTGAGAAGGTACTGAGAGGTGGCATAATATTTTTTTTTATTATGTGTATTAATCTGTGTACCTCTTGTCAACACACTATGGAGGTACGGCAAAACACCAAAAGTTACTATAAGAAATTCCAGTTATCTACACAATCGATCAGAACCATGAAAAACATACAAAAAAAAATACTTCTAATTAAGCATTACTATTCTATATGTGTACTGTTATTAACTAAATTTGATCTATTCTAGAGGGAGAAAACTAAGCAGCTTCAGCTTAGCGACATTGCCCCCTACTTTGAACTACCCATCGCCAAGGCTGCTAAAAAGCTGGATATATGTGCCACTGCTCTCAAAGGCATCTGTCGTAAAACATGGCGTATTACGCTGGCCATATCGAAAGGTCAGCTAGATCATTTTACTTTAATTTCAATCTATTTTGTGACAAAGATCAAGAAAAACAAATATGTTGAACACTATGTTGTGCACTTGTAAAGTCTTGTCGTCTATATATTAGCAAGAAATAACACTGAGAATAAATCCCACTCTACCAAAACCGTTATTTTTTAATTATATGGCGTATTTATTTAAAATATTGTTTGAGATTAAACTTTGAGAAATACTTTCTCACGATTACATGAATTTAATTTATTTGTACTATACAGGTGAGAAGCATCGATAGGCAAATTGCGACTCTACGGAGATCTGGTAATGGAGATGCAACAAGGAACGAGATTGAAACATTGATTGCTTCGAGGAGAAGGATAGTTGCTGATCTTGATCAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036422