BGIOSGA036428

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Revision as of 08:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036428| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036428, complete gene.| tag = OS12G02...")
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Gene Name

BGIOSGA036428

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036428, complete gene.

LocusTag

OS12G0228900

Ensembl Transcript ID

BGIOSGA036428-TA

Ensembl Protein ID

BGIOSGA036428-PA

Length

4813

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:6540412..6545224

Sequence Coding Region

6544938..6545224,6544525..6544602),complement(6544201..6544329,6544013..6544086),complement(6543404..6543497
,6543072..6543114),complement(6542747..6542809,6542145..6542374),complement(6541840..6541960
,6541659..6541759),complement(6541451..6541564,6541095..6541265),complement(6540892..6541035
,6540660..6540808),complement(6540412..6540560

Genome Context

<gbrowseImage1> name=IndicaChromosome12:6540412..6545224 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:6540412..6545224 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGGCGGAGGATGCGGCTGTGCCCTCGCCTCCGCCGAGCTTGCTGTCGCTGTGCTTGGAGGCGGTGGCCTCCCACCTCACCGCCGGCGCGGGGGGCGTCGGCCAAGCCGGTGGCCGGTGGGGCCGCGACCATTTCGACGGCGGGGAGGGCGGCGGCGACACGATGATTACGCCGGAGGAGGTGGCGGAGGCGCTGCCCTGGGAGCTCCTCCACCGCCTCGCGTCCCTCCTCCCGCCCGCCGCGCTCGAGGCGCTCCACCACGCCGCCCACGATCGGTGCTGCTTTTCAGCTGCCACTGCTGCTGTTGGGTTTGCGGGACCTGATGGTGATAGACGTGGGATAAAACGATCAAGGTGTGAGGATTTCAACCCTGAATGGCAAGCATTGTTCGGACTTCGTTGGCCCCGTTGTGATAATGCTGGACATGATGGCTTGCTTACTGTGGATTGGCAGCGACAGTATTGGGAAAAGCATCTGCAGGAGTGCCTTGACGAAGCTGCTGAGAGTGCCTTGCTTCCTTCTTTTTGTGGCAGTATTGATGAGCTGACTATACCAGCTAAAATCGTGAGTTGCATTCTCCACACCAAGGACATACCTCGACAGTATTCAAGATTGTCGTTTCATTGCAGCAGTTTTGGCTGTTACGCGAGGTGTTTGAGATTGCAAAGTGTTCTTTGCACAGCAGAAATTTCTGATTTGTTGCAAGGTAGCAAGCTGGAAAAGTTGATGTTTGTAAGAATTATATCAGACCTGGAGGTTAATGGTGTATGCATACTTCTGAGCTGCCATGCAGAGACATTGCTTTCTCTTGAATTTATCCATTGCCAGCTTTCTCCAGCTGTCATGGATAAAATTTGTAATAGTGTATTGCAGAAAGGATCAGTAAACCATGGAATCCAGAACTTCAGTATTAAATCGTCACGTATTTGTGAAAGCAATACTCTAAACATCTCTGCTGGCTTATTAGATTTTCTGTCAATGGGAAAGTCATTACAATGGCTATCACTTAACGATACTAAGATGCAGCCATTATTTGCTAAAATAATTGTCCATACTCTTCTTGGATCTTCAAGTGGCATACGAACTCTTGAGATATCAGAAAACAATATTGCAGGCTGGTTAAAGACAATGGATAAAAGATTTGCATGCTTTTCATCAGCACTGGAGTCAAATATTTCTTTGAACTCCTTGACCCTTCTTAACCTGAGGGGTAACAATTTGAACAAGGGTGATATTGAAGATCTATGCAAAATCCTAGTTAAGATGCCTAACTTGAGAGATTTAGATATAAGTGACAATCCGATCATGGACAAAGGAATCAGATTGCTTATTTGTTTTATTTCACGGACCCTTCGCAAGGAAAAATCACTTTCAAGGTTAAGAGCAGAGAACTGTGACTTGACCAATATTGGTGTGACTGAACTTCTTGAATGCCTTTCATCTGTGAGTGAACCACTTAATCTGTTGTCTATAGCGGATAATCATCTGGGCAGTTCTGTTGCAGTTGCATTGGCGAAATTTTTGGGTTCAGGTGTAAGGGAGCTAAATATTGAAGATATTGGCTTTGGGCCACTAGGCTTCCAAATCCTTGAGGAAGCATTACCAGCGGATGTAGCCCTTTCCCATATAAATGTCAGTAAGAATCGTGGTGGGATTAGAGCCGCACGATTTGTTTCCCGATTAATAAAACAAGCACCAGGCCTTGTGTCAGTCAATGCAGGGTCTAACCTCTTGCCTCCTGAATCTATGGAAGTCATCTGTGATGTCTTGAAGCAGAAAAATACATGTAACCTGGAGCGGTTGGATCTGATGGGCAACATGCATTTGTCAGATGCTGCCTTTCCTGCAGCACTTGAATTCAGGAAGCACGGAAAGCAAATCCTGATTGTTCCTTCACAGCCAGGTGCCTGTGCTCCATATGATGACGACCCATAA</cdnaseq>

Protein Sequence

<aaseq>MAAAAAEDAAVPSPPPSLLSLCLEAVASHLTAGAGGVGQAGGRWGRDHFDGGEGGGDTMITPEEVAEALPWELLHRLASLLPPAALEALHHAAHDRCCFSAATAAVGFAGPDGDRRGIKRSRCEDFNPEWQALFGLRWPRCDNAGHDGLLTVDWQRQYWEKHLQECLDEAAESALLPSFCGSIDELTIPAKIVSCILHTKDIPRQYSRLSFHCSSFGCYARCLRLQSVLCTAEISDLLQGSKLEKLMFVRIISDLEVNGVCILLSCHAETLLSLEFIHCQLSPAVMDKICNSVLQKGSVNHGIQNFSIKSSRICESNTLNISAGLLDFLSMGKSLQWLSLNDTKMQPLFAKIIVHTLLGSSSGIRTLEISENNIAGWLKTMDKRFACFSSALESNISLNSLTLLNLRGNNLNKGDIEDLCKILVKMPNLRDLDISDNPIMDKGIRLLICFISRTLRKEKSLSRLRAENCDLTNIGVTELLECLSSVSEPLNLLSIADNHLGSSVAVALAKFLGSGVRELNIEDIGFGPLGFQILEEALPADVALSHINVSKNRGGIRAARFVSRLIKQAPGLVSVNAGSNLLPPESMEVICDVLKQKNTCNLERLDLMGNMHLSDAAFPAALEFRKHGKQILIVPSQPGACAPYDDDP</aaseq>

Gene Sequence

<dnaseqindica>1..287#623..700#896..1024#1139..1212#1728..1821#2111..2153#2416..2478#2851..3080#3265..3385#3466..3566#3661..3774#3960..4130#4190..4333#4417..4565#4665..4813#ATGGCGGCGGCGGCGGCGGAGGATGCGGCTGTGCCCTCGCCTCCGCCGAGCTTGCTGTCGCTGTGCTTGGAGGCGGTGGCCTCCCACCTCACCGCCGGCGCGGGGGGCGTCGGCCAAGCCGGTGGCCGGTGGGGCCGCGACCATTTCGACGGCGGGGAGGGCGGCGGCGACACGATGATTACGCCGGAGGAGGTGGCGGAGGCGCTGCCCTGGGAGCTCCTCCACCGCCTCGCGTCCCTCCTCCCGCCCGCCGCGCTCGAGGCGCTCCACCACGCCGCCCACGATCGGTACCCCACCATGCTCCCCACCTCCTCTTTGTATTCCGCCATGGATGTTCTCTTCCTCCTTCGTGACGACTCTTCTGCACCATCGCCATGTCTTAATCTATCTACTTATTATTACGATTTGTGATGTGCTAATTTTTACGATATGAAGCGACCTAATCATCTTGGGAAGTTTTACCATCCTTAATAAAGGACTGGAGGACTCACGTTTCTCAGTGTAAAATTTGATAAATCTAGATACCTCGGTACCAAAATTTTTAGTGTAAAATTTAGATACATTGAGATATTTTTTAGAGGAAATTTCTCCATCATCTTACATATCTAATTGCCCATGTCAGGTGCTGCTTTTCAGCTGCCACTGCTGCTGTTGGGTTTGCGGGACCTGATGGTGATAGACGTGGGATAAAACGATCAAGGTAAGTAGTTCTGTTTTGAATTCGAGTTGATTGCATGTTCTAATTAAAATAGGCTCAGAATGATCTTGCAGAAGACCAAGAGTACCCGGTTACAATTTTTTTTAGAACCGTAGTTAGGTGTGAGAAATTTCTGTAGTTTCGTCCACAATAAGCAGATTATGTTGAAGTATCTTACATATGTGGTGATGCTTTTAGGTGTGAGGATTTCAACCCTGAATGGCAAGCATTGTTCGGACTTCGTTGGCCCCGTTGTGATAATGCTGGACATGATGGCTTGCTTACTGTGGATTGGCAGCGACAGTATTGGGAAAAGCATCTGCAGGAGTGCGTTATATAAAACTTGCAATTGGTCTTGATGAAATGCTTTTACTCTACGTAATCTGTTGTAAATTGCATTTGTAACATTTGTGTCCTCCCATTTCTTTGACCCTTCCACAGGTGCCTTGACGAAGCTGCTGAGAGTGCCTTGCTTCCTTCTTTTTGTGGCAGTATTGATGAGCTGACTATACCAGGTCAGTATTAAGAGTGTTTCCCAGCATGTCTATAATATTGCTATTCACTGTGCTGGACATTGTTTGATCACTTGGGTTAACTCTCGTAATTCCATATGGACATCCATTCCACTTATTTCAACATGGTTTAACTTTATCAGATATGAAAACAAATGGTTTGTAATTTATTACTCCCTCCGTTTCGTTTTATTTGACACCGTTGACTTTTTAGCACATGTTTGACCGTTTTATTTGACACCGTTGACTTTTTAGCACATGTTTGACCGTTCGTCTTATTCAAAAACTTTTGTGAAATATGTAAAACTATATGTATGCATAAAAGTATATTTAACAATCAATCAAATGATAGGAAAATAATTAATAATTATTTAAATTTTTTGAATAAGACGAGCGGTCAAACATGTGATAAAAAGTCAACGGTGTCAAATAAAACGAAACGGAGGGAGTATGTTACAGTGCATTACCCATTTGTTGCAACTGTAATCGTGATTTTCTTTCGTTGATGTTCTGAACAGCTAAAATCGTGAGTTGCATTCTCCACACCAAGGACATACCTCGACAGTATTCAAGATTGTCGTTTCATTGCAGCAGTTTTGGCTGTTACGCGAGGTACCATGATAAATTGATAATATCACTTATGTCACATGCTCACATGCAATTCTTTTTTTTTTTGGGAGGGACGCTCAAATTTAACTCTATTATACATATTTGATTAAATAAGCTGGCATCACTGAAGACTTGGTGAGATTTATGGTGACCTAGTGATGCGATTTTAGGTTTGCCATTATGTAACTAGTAATTTTGTTATCTTTTTTGGACCAGATTGGTTCATGATTTGACCCTTTCTAACTTCAATTTTCTTAACTTTTGTTCTACTTCCATTTTCACTTATTTTCAGGTGTTTGAGATTGCAAAGTGTTCTTTGCACAGCAGAAATTTCTGTAAGTGCTGATGTCATACCCCATATTTCTGTTATACTCCCCTATATTTTGAAATCTATAGATCAAGTTGCATCTGATGTGTCATTTTGGCTGTTGAATGCCCTTTTAATTTTGCAACTGCCTTTTATGGTTCCTTTTTTTCAAATGATGGGTCTCTCCCTTCTTAATACGAAATCTAATCTCAGCATGCTGGCCTAAATAATCCTTTTTAGCGAAATTCAAATCTTTCTAGTTTGACTGCTGAAAATCATTTGTCTTTCAGGATTTGTTGCAAGGTAGCAAGCTGGAAAAGTTGATGTTTGTAAGAATTATATCAGACCTGGAGGTAATCCTATACTGGTGAAACTGCATCTGTCATTGTAACTGTAGCTTCCGGGAATAATTGTGTTAACTCTGATGATTCTGTCTGAATCCTTTCTGAACAGTAATCTTCTGTAAACTTAGTTCCAAAGAAAGTGCACTAGTTCATTTCTCGCGCGTTATAATATACATATTTAAACATAAGAAAATCATAAGATATTTTTCCCTATTTGATGTACTATCCATACTATTAAGGGGTAAATGCCCAAGCATTCTAAATAAGGAGTAACCTGAGAAGTACTACCTCTTTCTGCATGGTCCATCTCTATTGTTTTATTACCTGATTGCTAGTGATTAGCTCATAAATGTTGAATTTCTTCTCAATTCGTACTGACAGGTTAATGGTGTATGCATACTTCTGAGCTGCCATGCAGAGACATTGCTTTCTCTTGAATTTATCCATTGCCAGCTTTCTCCAGCTGTCATGGATAAAATTTGTAATAGTGTATTGCAGAAAGGATCAGTAAACCATGGAATCCAGAACTTCAGTATTAAATCGTCACGTATTTGTGAAAGCAATACTCTAAACATCTCTGCTGGCTTATTAGATTTTCTGTCAATGGGAAAGTAAGTCACATGACCTACTATAGTTGGTAGCACTATTAGTAGGTCTTATTTATATTCTGATTCAACAGATAGAAGAAAACATAACTTGATCTTGCTGAATTTATGGATTTTGTACATGAGTTGAATAGTGTAGTTCATTGATAACTGATTATTGAAACACTGTTCTATCCTTGTTATTGTTCAGGTCATTACAATGGCTATCACTTAACGATACTAAGATGCAGCCATTATTTGCTAAAATAATTGTCCATACTCTTCTTGGATCTTCAAGTGGCATACGAACTCTTGAGATATCAGAAAACAATGTGGGTTCACAGGATAACAATCTTTTTTTTCATTTGTCCTTTGTTTTGATTGTACTATGGAACTAATTAATCTCTTTTAGATTGCAGGCTGGTTAAAGACAATGGATAAAAGATTTGCATGCTTTTCATCAGCACTGGAGTCAAATATTTCTTTGAACTCCTTGACCCTTCTTAACCTGAGGTATTACTCTGTTATTTTGCACCGCATTATATTGAAAATTATTTTTACTTACTGGTCTGATTGAGTATTTGATCATTAATCTTTACCATACCAGGGGTAACAATTTGAACAAGGGTGATATTGAAGATCTATGCAAAATCCTAGTTAAGATGCCTAACTTGAGAGATTTAGATATAAGTGACAATCCGATCATGGACAAAGGAATCAGGTATTCATAACTCTGAACCCAAAATCACTATAGACTAAGTGATGTAGATCATAGAATACTATTTTCTGTCTATATTTTTTAGAGATGCATATATTGTGAGTGCATACTATATGTTTTAGATCTATGATAGAACAAATGTCTTTTGTAGTCTTACACGTTGACTAAGCTTGTTAAAAAAATTGCAGATTGCTTATTTGTTTTATTTCACGGACCCTTCGCAAGGAAAAATCACTTTCAAGGTTAAGAGCAGAGAACTGTGACTTGACCAATATTGGTGTGACTGAACTTCTTGAATGCCTTTCATCTGTGAGTGAACCACTTAATCTGTTGTCTATAGCGGATAATCATCTGGGCAGGTGAGTCACTTTTTTCTCATTTTCGTAGTGGTCACTGTTCAATTATAATGTATTAGCAGTTCTGTTGCAGTTGCATTGGCGAAATTTTTGGGTTCAGGTGTAAGGGAGCTAAATATTGAAGATATTGGCTTTGGGCCACTAGGCTTCCAAATCCTTGAGGAAGCATTACCAGCGGATGTAGCCCTTTCCCATATAAATGTCAGGTAGGAGAAAACCATAGTGGGTGTGAAAGTGGTACTTGTGTCATTGTGGCATTTGCCTTACATACTTCATGTCTATTTTGCAGTAAGAATCGTGGTGGGATTAGAGCCGCACGATTTGTTTCCCGATTAATAAAACAAGCACCAGGCCTTGTGTCAGTCAATGCAGGGTCTAACCTCTTGCCTCCTGAATCTATGGAAGTCATCTGTGATGTCTTGAAGCAGAAAAATACATGTAAGAATTGGAAACACTACTTTGGGTTTACTGGTTTAGATCGAAATGGACATAGACTAATTAGAGATAATTTGATAACCCATGGAAATCTCGTTTTAGGTAACCTGGAGCGGTTGGATCTGATGGGCAACATGCATTTGTCAGATGCTGCCTTTCCTGCAGCACTTGAATTCAGGAAGCACGGAAAGCAAATCCTGATTGTTCCTTCACAGCCAGGTGCCTGTGCTCCATATGATGACGACCCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036428

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA036428&oldid=52733"