BGIOSGA036435

From RiceWiki
Revision as of 08:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036435| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036435, complete gene.| tag = OS12G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036435

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036435, complete gene.

LocusTag

OS12G0225300

Ensembl Transcript ID

BGIOSGA036435-TA

Ensembl Protein ID

BGIOSGA036435-PA

Length

2864

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:6325622..6328485

Sequence Coding Region

6326343..6328485,6326273..6326307),complement(6325622..6325639

Genome Context

<gbrowseImage1> name=IndicaChromosome12:6325622..6328485 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:6325622..6328485 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGATGATGAGAGGGGGGATGGCGATGAGCTGATTGCCGACTATGTCGACTGCCTCATGTCCCTGGACACCAACTCCCGCTCTTGCCAGAATGACGCCCTGATTCTTGAAGGAGCTCCAGATGATGTAGACGACGACGCCGCTGCAGCGGCGGCCGCGGCGGCGGAGCAGGATGTGATGAGAGATTTTGCTCCTGGTGATGGTGATGGTGATGGTGATGCTGATGCTGAGAATGATCCCAAGGAGCCGGTGCTCGGCATGACGTTCGAGTCCGACGAGGCGGCAAAGATGTTCTACAATGAGTACGCCAGGTGGCTCGGGTTCCCCTTCCGCGTCGGCCGGTCCCGGCGATCGAAGGGCATGGAGGAGGTTGTAATCATGAAGAGGTTCGTTTGCTCGAGGGAAGGGGCGCACAAGAAGAAGCAGCCATCGACGTCCGGCGAGGCTACCAGTAAGCGTGAGAGGGCATCGATGCGGGAAGGTTGCAATGCCATGATGGAGGTGGTCAGGGACAAGGACCATTGGGTTGTCTCCAAGCTTGAGAAGGCTCACAACCATAGCCTTGGCATCGGCACCAGATACGGGTATCTTCGTGCCAGAGGATTGCCTGATGTGTCCAACAAGATCGCTGCGATGGGCTCTGACGGGACCGCCTCTCTTAGGCAGAATTTCCTTGGGGAGACCGGTGACGGCCAGGGTCTTCTTGATTATCTGAAGAAGAAGCAAGCCAATGACCCCAGGTGTTCCCATGCCATACAGGTCGACAAGAATGGTTGTCTGATGAATGTTTTTTGGGCTGATTCTAGAGCTAAAGAAGCCTATCGGCATTTTGGGGATGCTGTCACATTTGACACGTCATATAAGAAGACCAAGTATATGATGCCCTTTGTTACCTTCTCAGGTGTCAACCATCATCTTCAGACAGTAATTTTTGGTTGTGCATTTCTTATGGAAGAAACTGAATCCTCATTTTCTTGGCTGTTTGAAACTTGGTTAGCAGCAATGGGTGGGAAGGCACCAGGCTCGTTAGTCACTGACCAAAATAGGGCTATGAAGGCTGCGATTGGAAAGGTTTTTCCAGATACCTGTCACCGCTTCTGCAAGTGGTATATTTTGAGTAGAACCAAACAAAAATTAGGTCATGCATACTCTGAGCATCCGGACCTGAGGGATGAGATAGAAAGCTGTGTGATTGAATCTGAAACTATCTCTACTTTTGAAACATCATGGATGTCAATCCTCGAGAAATATGACTTGAGAAAACATGCATGGCTTCAAGCAATTTACAATATACGCCAAAAGTGGGTTCCTTTGTACATGATGGGTACATTCTTTGCAGAAATATCACCCACACAAAAATTGGAGACCATGAATGACTTTTATAAGAAATACTTCAATACAAAGACAACGCTGGAGGTTTTCCTTAATCAATTTGATTCGACCATGACAAGTCGATATGAAAATGAAGCACAAGCAGATATAGACACTCGGTTAAATGAGGCAACTACAAGGACTGCATCGCCAATAGAGAAACAGGCAGCAAGCACTTACACAAAAGCAGTCTTCAGTAGGTTTCAAGAAGAATTCACAGAATCCTTGGGTTATATCATTCAGAAAACTGAAGAAGGCAGAGTAAGCAAATTCAGCATCACAAAAGATGAAGATGATCCATCAGACACATTCTGTGTGACTTATAATGCTTCCAGTAAGATGGCAAAGTGTAGTTGCAAGTACTTTAAGTTCTCAGGTATTTTATGCCGTCATATTCTTGGAGTATTCATAATAGTTGATCCACGCACACTTCCACCTGATTACTTTTTGAAACGTTGGACGAGGAATGCCAGACATGATGAATTGTTGGAAGACAACAGCAATAACCACAAAGATGCTACTTGTCAATCCATTACAAGCCGTTACAATGTCCTGTGCGCTGATGCCATCAGATGTGCTGACAAAGGATCTGCATCAAAGGCTGTGTATAAAGCAGCAAAAGACATCTTACAGAAGGCATATGAAGAAATCATTGCCTATGAAAGAAATCCTGGCAGAGGATTACAAAGGGATGCTATAAACATCAATGAGGATATCACAATAGATGATACCATGAATGATCAATCTTTGCCAGATTTCTGGACAAAAGATTATATTAAAGGTATTTGGCATCAGAAGTGCAAGGAACCTAAAATCTTCTAG</cdnaseq>

Protein Sequence

<aaseq>MEDDERGDGDELIADYVDCLMSLDTNSRSCQNDALILEGAPDDVDDDAAAAAAAAAEQDVMRDFAPGDGDGDGDADAENDPKEPVLGMTFESDEAAKMFYNEYARWLGFPFRVGRSRRSKGMEEVVIMKRFVCSREGAHKKKQPSTSGEATSKRERASMREGCNAMMEVVRDKDHWVVSKLEKAHNHSLGIGTRYGYLRARGLPDVSNKIAAMGSDGTASLRQNFLGETGDGQGLLDYLKKKQANDPRCSHAIQVDKNGCLMNVFWADSRAKEAYRHFGDAVTFDTSYKKTKYMMPFVTFSGVNHHLQTVIFGCAFLMEETESSFSWLFETWLAAMGGKAPGSLVTDQNRAMKAAIGKVFPDTCHRFCKWYILSRTKQKLGHAYSEHPDLRDEIESCVIESETISTFETSWMSILEKYDLRKHAWLQAIYNIRQKWVPLYMMGTFFAEISPTQKLETMNDFYKKYFNTKTTLEVFLNQFDSTMTSRYENEAQADIDTRLNEATTRTASPIEKQAASTYTKAVFSRFQEEFTESLGYIIQKTEEGRVSKFSITKDEDDPSDTFCVTYNASSKMAKCSCKYFKFSGILCRHILGVFIIVDPRTLPPDYFLKRWTRNARHDELLEDNSNNHKDATCQSITSRYNVLCADAIRCADKGSASKAVYKAAKDILQKAYEEIIAYERNPGRGLQRDAININEDITIDDTMNDQSLPDFWTKDYIKGIWHQKCKEPKIF</aaseq>

Gene Sequence

<dnaseqindica>1..2143#2179..2213#2847..2864#ATGGAGGATGATGAGAGGGGGGATGGCGATGAGCTGATTGCCGACTATGTCGACTGCCTCATGTCCCTGGACACCAACTCCCGCTCTTGCCAGAATGACGCCCTGATTCTTGAAGGAGCTCCAGATGATGTAGACGACGACGCCGCTGCAGCGGCGGCCGCGGCGGCGGAGCAGGATGTGATGAGAGATTTTGCTCCTGGTGATGGTGATGGTGATGGTGATGCTGATGCTGAGAATGATCCCAAGGAGCCGGTGCTCGGCATGACGTTCGAGTCCGACGAGGCGGCAAAGATGTTCTACAATGAGTACGCCAGGTGGCTCGGGTTCCCCTTCCGCGTCGGCCGGTCCCGGCGATCGAAGGGCATGGAGGAGGTTGTAATCATGAAGAGGTTCGTTTGCTCGAGGGAAGGGGCGCACAAGAAGAAGCAGCCATCGACGTCCGGCGAGGCTACCAGTAAGCGTGAGAGGGCATCGATGCGGGAAGGTTGCAATGCCATGATGGAGGTGGTCAGGGACAAGGACCATTGGGTTGTCTCCAAGCTTGAGAAGGCTCACAACCATAGCCTTGGCATCGGCACCAGATACGGGTATCTTCGTGCCAGAGGATTGCCTGATGTGTCCAACAAGATCGCTGCGATGGGCTCTGACGGGACCGCCTCTCTTAGGCAGAATTTCCTTGGGGAGACCGGTGACGGCCAGGGTCTTCTTGATTATCTGAAGAAGAAGCAAGCCAATGACCCCAGGTGTTCCCATGCCATACAGGTCGACAAGAATGGTTGTCTGATGAATGTTTTTTGGGCTGATTCTAGAGCTAAAGAAGCCTATCGGCATTTTGGGGATGCTGTCACATTTGACACGTCATATAAGAAGACCAAGTATATGATGCCCTTTGTTACCTTCTCAGGTGTCAACCATCATCTTCAGACAGTAATTTTTGGTTGTGCATTTCTTATGGAAGAAACTGAATCCTCATTTTCTTGGCTGTTTGAAACTTGGTTAGCAGCAATGGGTGGGAAGGCACCAGGCTCGTTAGTCACTGACCAAAATAGGGCTATGAAGGCTGCGATTGGAAAGGTTTTTCCAGATACCTGTCACCGCTTCTGCAAGTGGTATATTTTGAGTAGAACCAAACAAAAATTAGGTCATGCATACTCTGAGCATCCGGACCTGAGGGATGAGATAGAAAGCTGTGTGATTGAATCTGAAACTATCTCTACTTTTGAAACATCATGGATGTCAATCCTCGAGAAATATGACTTGAGAAAACATGCATGGCTTCAAGCAATTTACAATATACGCCAAAAGTGGGTTCCTTTGTACATGATGGGTACATTCTTTGCAGAAATATCACCCACACAAAAATTGGAGACCATGAATGACTTTTATAAGAAATACTTCAATACAAAGACAACGCTGGAGGTTTTCCTTAATCAATTTGATTCGACCATGACAAGTCGATATGAAAATGAAGCACAAGCAGATATAGACACTCGGTTAAATGAGGCAACTACAAGGACTGCATCGCCAATAGAGAAACAGGCAGCAAGCACTTACACAAAAGCAGTCTTCAGTAGGTTTCAAGAAGAATTCACAGAATCCTTGGGTTATATCATTCAGAAAACTGAAGAAGGCAGAGTAAGCAAATTCAGCATCACAAAAGATGAAGATGATCCATCAGACACATTCTGTGTGACTTATAATGCTTCCAGTAAGATGGCAAAGTGTAGTTGCAAGTACTTTAAGTTCTCAGGTATTTTATGCCGTCATATTCTTGGAGTATTCATAATAGTTGATCCACGCACACTTCCACCTGATTACTTTTTGAAACGTTGGACGAGGAATGCCAGACATGATGAATTGTTGGAAGACAACAGCAATAACCACAAAGATGCTACTTGTCAATCCATTACAAGCCGTTACAATGTCCTGTGCGCTGATGCCATCAGATGTGCTGACAAAGGATCTGCATCAAAGGCTGTGTATAAAGCAGCAAAAGACATCTTACAGAAGGCATATGAAGAAATCATTGCCTATGAAAGAAATCCTGGCAGAGGATTACAAAGGGATGCTATAAACATCAATGAGGATATCACAATAGATGATACCATGAATGATCAATCTTTGCCAGATTTCTGGACAAAAGGTATGTTAATCTAAATTATATTAAACGTTGTGTAGATTATATTAAAGGTATTTGGCATCAGAAGTGCAAGGTTTGTAATGATATTGGGTTACTGACGTTTATTGTTTTGCTTGATTCTTCAAAATTACTCCTGAAGCATAGTCAGAATCATTCACTGATTGTAACACTTCCTAACCCAAAGGAATGTAAGCAGATGTCAAACTGTCATGCCAACCTTTTGAAATGAACGCAATATTGCTTTATGAAACTTGCTTCTCATGTTATTGGTAGAAGATACATCATCAGGCTTAGGATCTAGAATTGAATTGTAGATGTTTTAACAGGATTAAATTGTAGAATATAAGATTGAACCTGATTATATAGATGTATTTCCCTTTATACCATGCGTCTTCACTCTTAATAATGGTTTTTAGTTGTGCTTTAGATTTGAATAAATAATTGGTGAATTTTTACAATTGAGAGGACATATGCAAGCAATTATTTGTATTTAGTTACTGGAATCAGTAGAATTAGATTTAGTTATGATCCTGATCATACCCAAAAAAAGCACCCTAAAAAGAGTGCAGAGTCACAGATCTCTTAGACTCAAATTGAGATGACAACCATCATAAAACATTGTGTGATGTGCATTGGTACCATATCAAATGCTTTCTTATCAGAGTCAAGCCATGCAAAAAATGATGCATTTTCTTTGCCTTTACAGGAACCTAAAATCTTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036435